Definition Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession NC_007969
Length 3,059,876

Click here to switch to the map view.

The map label for this gene is 93005641

Identifier: 93005641

GI number: 93005641

Start: 955923

End: 957293

Strand: Reverse

Name: 93005641

Synonym: Pcryo_0811

Alternate gene names: NA

Gene position: 957293-955923 (Counterclockwise)

Preceding gene: 93005642

Following gene: 93005636

Centisome position: 31.29

GC content: 50.26

Gene sequence:

>1371_bases
ATGGATAATATCAATCGTACAGTAGTAGTCAATGACAACGCTGACCCCATTACAGGTGAGCCAGGCTCACATCCAATAGG
TACAGCTCTTGGTGGTACAGGCGGTGCAGCAGCAGGCGCAGCTATTGGTGCTATTGGTGGTCCATTAGGCATGCTGATTG
GTGGTGCTATTGGTGCTATCGTTGGTGGTGTCGCAGGTAGTTCAGTCGGTGAAATGCTAGACCCAACAGTAGAATATGAA
TACTGGCAAGAAACTCATACCACGCGCCCTTATTATCATGAAGATTATGATTATGATACCGATTATCATCCAGCCTATGC
AGTAGGTTATGCCACCCGTGCGCATTATCCAAATACTACACGCTTTGAAGAAGTTGAAGCTGAGCTTGAACAGCGCTGGT
ATGAGGTAAAAGGCGACTCACGCATGACCTGGCTACAAGCAAAAGACATGGTACGTGATGGTTGGGATAAGACCCATGCC
CGTATGAATGGTGAAAACTATGAGCCAAAAGAGTACGTCCATTATGCAGGTCATAGAGAGCCTATTGAGCCGATCCATCA
TGGTGAAGATAAGCCGCACCCAGTAGCGACTGGTACTGGCGCGCTTAGTGGCGCAGCAGCAGGTGCAGCCGTAGGCACAG
CAGTCGGAGGTCCAGTTGGCACCTTAGTAGGTGGCGCTGTTGGAGCAATCGCAGGTAGCAAAGTTGGACATGAAGCAGGC
GAGATGGTCAATCCTACCGATAGCTTAGAAGCTCATGAGAAGCCACATCCTATTGCTAGTGGTACTGGTGCACTGGGCGG
TGCAGCAGCAGGCGCTGCTGTAGGTACGGCAGTTGGTGGTCCAGTCGGTACAGTAATCGGCGGCTTAGCAGGCGCAGTTG
CTGGTGGTGCTGGTGGCCAAGAAGTTGGTGAAGCCGTTAATCCTACTGATCAAAATGAAGTACAACGAGAAGCAAATCCT
GTTAGTAGTGGTACAGGTATGGTCGGCGGTGCAGCAGCAGGCGCAGCTATCGGTGCAGTAGGTGGTCCAGTAGGTTCAGT
CGTAGGCGGTGCCGTTGGTGCAGTCGTCGGTGCAACAGCTGGTAACGCCGTTGCCAATGCGTTTGAAGGCAATATGGAAG
AAGACACTTACTGGCGTACTCAGCATGCGACGACTGACTACTATAATCCGCAATATGATTACGATACCGACTATCGTAAT
GCCTATGGTTATGGTTATGCGCAGCGCAAGCAGTATGGTAACGACCAAACGTTTGAGCTGGTAGAGCAAGACTTGCAGAG
AGATTGGTTAAATTCACGTGGCAACTCACGCTTAGAATGGTCAGATGCTAGATTTGCCGTACGTGATGCGTGGAATCGTC
CTATTATTTAA

Upstream 100 bases:

>100_bases
TGGATGTCAAAAATGACCTTTATTTTAATGTCATTTAGATTGCAGGCTACTTATATCATTCTTCATAACTTAACAATAAT
AGTAAAAAGGATAATAGCTC

Downstream 100 bases:

>100_bases
TTATTAATGATGAGGCAATGATTGCTTATCGTAGACAATTAAAATGTTATGAAAAAACAGCTTCTATTAAATAATAGAAG
CTGTTTTTTTAGTCTGATTT

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAIVGGVAGSSVGEMLDPTVEYE
YWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTTRFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHA
RMNGENYEPKEYVHYAGHREPIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG
EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQEVGEAVNPTDQNEVQREANP
VSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATAGNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRN
AYGYGYAQRKQYGNDQTFELVEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII

Sequences:

>Translated_456_residues
MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAIVGGVAGSSVGEMLDPTVEYE
YWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTTRFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHA
RMNGENYEPKEYVHYAGHREPIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG
EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQEVGEAVNPTDQNEVQREANP
VSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATAGNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRN
AYGYGYAQRKQYGNDQTFELVEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII
>Mature_456_residues
MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAIVGGVAGSSVGEMLDPTVEYE
YWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTTRFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHA
RMNGENYEPKEYVHYAGHREPIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG
EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQEVGEAVNPTDQNEVQREANP
VSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATAGNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRN
AYGYGYAQRKQYGNDQTFELVEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47160; Mature: 47160

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAI
CCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGGVAGSSVGEMLDPTVEYEYWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTT
HHHHCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCC
RFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHARMNGENYEPKEYVHYAGHRE
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCCC
PIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG
CCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCHHHC
EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
EVGEAVNPTDQNEVQREANPVSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATA
HHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRNAYGYGYAQRKQYGNDQTFEL
CHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHH
VEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII
HHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDNINRTVVVNDNADPITGEPGSHPIGTALGGTGGAAAGAAIGAIGGPLGMLIGGAIGAI
CCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGGVAGSSVGEMLDPTVEYEYWQETHTTRPYYHEDYDYDTDYHPAYAVGYATRAHYPNTT
HHHHCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCC
RFEEVEAELEQRWYEVKGDSRMTWLQAKDMVRDGWDKTHARMNGENYEPKEYVHYAGHRE
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHCCCCC
PIEPIHHGEDKPHPVATGTGALSGAAAGAAVGTAVGGPVGTLVGGAVGAIAGSKVGHEAG
CCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCHHHC
EMVNPTDSLEAHEKPHPIASGTGALGGAAAGAAVGTAVGGPVGTVIGGLAGAVAGGAGGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
EVGEAVNPTDQNEVQREANPVSSGTGMVGGAAAGAAIGAVGGPVGSVVGGAVGAVVGATA
HHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GNAVANAFEGNMEEDTYWRTQHATTDYYNPQYDYDTDYRNAYGYGYAQRKQYGNDQTFEL
CHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHH
VEQDLQRDWLNSRGNSRLEWSDARFAVRDAWNRPII
HHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA