| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is artJ [H]
Identifier: 93005158
GI number: 93005158
Start: 395224
End: 396141
Strand: Direct
Name: artJ [H]
Synonym: Pcryo_0327
Alternate gene names: 93005158
Gene position: 395224-396141 (Clockwise)
Preceding gene: 93005157
Following gene: 93005159
Centisome position: 12.92
GC content: 44.66
Gene sequence:
>918_bases ATGAGTAACTATCTTGTCATAGGCTCAAATTCAGTGACCAGTCAGCGGTTTTCAAAACCTATGCTAGCAGTGGCAGCATT TTTAGCTTTAGTCGGTTGTAGTAACGGTCAAGATAAAGGGGCTGAAAGGACTAACTCAGACGCTAATAATACTGCGGAGA CAGCTGAGAAAAAAGCAGATGCGACAGAGGGTAATGTGCTGCGTATCGGTACTGAGGGTGCTTATGCGCCCTTTAACTAT ACCAATGCAGATGGCACGCTCGGCGGTTTTGATATCGAAATTGCCAATGCTATCTGTGCTGATATGCAAGTAACTTGTGA GATTGTGGCGCAAGATTGGGACGGTATCATCCCCGGTCTCAAGGCTGGTAAATATGACGCTATCGTCGCTGCGATGTCAG TCACCCCTGAGCGCGCTCAACAAGTTGCTTTTACGGATCCGTATTTTAGCAATGCGCTAGTGTTTTTAGCCAAAAAAGAT AGCACCTTTGACCCTGCTAAGGTGACTGATATTAATGCCCACTCTATCGCCGCTCAGCGCTCCACCATCTCATCACAGTG GCTAGAAAACACTTATCCAAAAGCGGATATGAAGCTATATGATACATTAAGTAATGCGTTTTTAGATTTGGGTGCTGGTC GCGTCGATGCCATGATATCGGATAAACTGCCAGCGATTGAATGGCTCAGCTCGACGTCCGGTAATAATTATGTGTTAAAG GGCGCGGAGATTGATATCAATGATAACTTTGCGATTGCCGTCCGTCCGAATGATGAAGCTCTACAAGCAAAAATTAATAC CTCATTGAGCAATATTAAAGCCAACGGCACTTATGATAAGATCAATCAAAAATACTTTGCTGTGCCAGCAAGTGCGACAC TAACAGAAGCACCAGCTATAGATAGTGCTACACAGTAA
Upstream 100 bases:
>100_bases ATACCTGTGATGACAAATATGTATTGATCCTAAGTTTTGAGGAATGCATATTTGCCAGCACTTATCAAAATTTCACGACG TAATAAACTCAAGGATGATT
Downstream 100 bases:
>100_bases AGGCTCAGTAGTATTACGGTTTTCACGACTGCATTAATATTGTGTTAATAAGCATGAGGACATCACCATTATGGTGATGT CCTTTTTCTTGCGTACTTAT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSNYLVIGSNSVTSQRFSKPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKADATEGNVLRIGTEGAYAPFNY TNADGTLGGFDIEIANAICADMQVTCEIVAQDWDGIIPGLKAGKYDAIVAAMSVTPERAQQVAFTDPYFSNALVFLAKKD STFDPAKVTDINAHSIAAQRSTISSQWLENTYPKADMKLYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLK GAEIDINDNFAIAVRPNDEALQAKINTSLSNIKANGTYDKINQKYFAVPASATLTEAPAIDSATQ
Sequences:
>Translated_305_residues MSNYLVIGSNSVTSQRFSKPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKADATEGNVLRIGTEGAYAPFNY TNADGTLGGFDIEIANAICADMQVTCEIVAQDWDGIIPGLKAGKYDAIVAAMSVTPERAQQVAFTDPYFSNALVFLAKKD STFDPAKVTDINAHSIAAQRSTISSQWLENTYPKADMKLYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLK GAEIDINDNFAIAVRPNDEALQAKINTSLSNIKANGTYDKINQKYFAVPASATLTEAPAIDSATQ >Mature_304_residues SNYLVIGSNSVTSQRFSKPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKADATEGNVLRIGTEGAYAPFNYT NADGTLGGFDIEIANAICADMQVTCEIVAQDWDGIIPGLKAGKYDAIVAAMSVTPERAQQVAFTDPYFSNALVFLAKKDS TFDPAKVTDINAHSIAAQRSTISSQWLENTYPKADMKLYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLKG AEIDINDNFAIAVRPNDEALQAKINTSLSNIKANGTYDKINQKYFAVPASATLTEAPAIDSATQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=234, Percent_Identity=36.3247863247863, Blast_Score=161, Evalue=4e-41, Organism=Escherichia coli, GI1787088, Length=230, Percent_Identity=33.4782608695652, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI1788649, Length=226, Percent_Identity=35.3982300884956, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=32.5991189427313, Blast_Score=130, Evalue=8e-32, Organism=Escherichia coli, GI1788228, Length=225, Percent_Identity=25.3333333333333, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787031, Length=221, Percent_Identity=27.6018099547511, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32510; Mature: 32379
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYLVIGSNSVTSQRFSKPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKAD CCCEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC ATEGNVLRIGTEGAYAPFNYTNADGTLGGFDIEIANAICADMQVTCEIVAQDWDGIIPGL CCCCCEEEEECCCCCCCCEECCCCCCCCCEEEEEHHHHHCCHHEEEEEEECCCCCCCCCC KAGKYDAIVAAMSVTPERAQQVAFTDPYFSNALVFLAKKDSTFDPAKVTDINAHSIAAQR CCCCHHEEEEEEECCHHHHHEEEECCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHH STISSQWLENTYPKADMKLYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCEEEEE GAEIDINDNFAIAVRPNDEALQAKINTSLSNIKANGTYDKINQKYFAVPASATLTEAPAI CEEEEECCCEEEEECCCCHHHHEECCCCHHHEECCCCHHHCCCEEEEECCCCCCCCCCCC DSATQ CCCCC >Mature Secondary Structure SNYLVIGSNSVTSQRFSKPMLAVAAFLALVGCSNGQDKGAERTNSDANNTAETAEKKAD CCEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCC ATEGNVLRIGTEGAYAPFNYTNADGTLGGFDIEIANAICADMQVTCEIVAQDWDGIIPGL CCCCCEEEEECCCCCCCCEECCCCCCCCCEEEEEHHHHHCCHHEEEEEEECCCCCCCCCC KAGKYDAIVAAMSVTPERAQQVAFTDPYFSNALVFLAKKDSTFDPAKVTDINAHSIAAQR CCCCHHEEEEEEECCHHHHHEEEECCCCCCCEEEEEEECCCCCCCCEEEECCHHHHHHHH STISSQWLENTYPKADMKLYDTLSNAFLDLGAGRVDAMISDKLPAIEWLSSTSGNNYVLK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCEEEEE GAEIDINDNFAIAVRPNDEALQAKINTSLSNIKANGTYDKINQKYFAVPASATLTEAPAI CEEEEECCCEEEEECCCCHHHHEECCCCHHHEECCCCHHHCCCEEEEECCCCCCCCCCCC DSATQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]