Click here to switch to the map view.

The map label for this gene is nocQ [H]

Identifier: 93005159

GI number: 93005159

Start: 396578

End: 397312

Strand: Direct

Name: nocQ [H]

Synonym: Pcryo_0328

Alternate gene names: 93005159

Gene position: 396578-397312 (Clockwise)

Preceding gene: 93005158

Following gene: 93005160

Centisome position: 12.96

GC content: 46.67

Gene sequence:

>735_bases
GTGTTTGACTTACAAGGATTTGGCGCGCTTTTATTGAGCGGCGCTACCGTCACCATACAGCTTGCCATGACCAGTCTGAT
CATCGGCATGGTCTTAGGTTTGCTCGGTGCCACAGCAAAGCTGTCTAATATCTGGCTGCTGCGCAAAATTGCGACTGTCT
ATACCGCCACGATGCGCGGTATTCCTGAGCTACTATTGGTACTGTTTATCTACTATGGTGGCTCTATACTGCTAATGAGC
ATCCTCAAAAAGTTTGGCTATAACGACTATGTCGAGATTAGTGCTTTTTGGGGCGGCGTGATGGCACTTTCTATTGCTTT
CGGTGCTTATGCGACTGAAATCTTCCGTATGTCGATTCAAGAGATTCCTATAGGACAGCGAGAAGCGGCGCAAGCGATTG
GTATGCGTCCTTTTCAGACTTTTTATCGCATAACCTTACCTCAAGTATGGCAGATTGCATTGCCAGGTTTGGGTAATCTA
TTTTTGGTTTTGCTTAAAGATACGGCACTGGTGTCGGTCGTAGGTCTCAAAGATATCATGTATCAGTCCTCGCGCGCCGC
GCAATCAACACAGCAGCCATTTACCTTTTATATGGCAGCGGCAATAATTTATTTAGGTTTGACCATGCTGATTACTGGCT
TTATGATGTGGCTTGAATGGCGTGCCAATCCGGCAGCGCGTTATGCTAAAAAGCTCAGCCGTCAAACCACTCACCGTCAA
TCGACCATAGGATAA

Upstream 100 bases:

>100_bases
GGGTCTAAAGTACGTTTATTAACTGTATTCAGCTATTGATGCTGATTTTTTTAACTCATATTTTGCAATTTGCTAATATA
AAGAGACTGAGTGGATAATC

Downstream 100 bases:

>100_bases
AGGGGAAGACACTATGGATTGGAATTGGCAGGTTATTTTTGATCATATCCCAGACTTACTCGGTGGCGCGGTATTGACCG
TACAGCTGGTTTTGTTCTCG

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MFDLQGFGALLLSGATVTIQLAMTSLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLLVLFIYYGGSILLMS
ILKKFGYNDYVEISAFWGGVMALSIAFGAYATEIFRMSIQEIPIGQREAAQAIGMRPFQTFYRITLPQVWQIALPGLGNL
FLVLLKDTALVSVVGLKDIMYQSSRAAQSTQQPFTFYMAAAIIYLGLTMLITGFMMWLEWRANPAARYAKKLSRQTTHRQ
STIG

Sequences:

>Translated_244_residues
MFDLQGFGALLLSGATVTIQLAMTSLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLLVLFIYYGGSILLMS
ILKKFGYNDYVEISAFWGGVMALSIAFGAYATEIFRMSIQEIPIGQREAAQAIGMRPFQTFYRITLPQVWQIALPGLGNL
FLVLLKDTALVSVVGLKDIMYQSSRAAQSTQQPFTFYMAAAIIYLGLTMLITGFMMWLEWRANPAARYAKKLSRQTTHRQ
STIG
>Mature_244_residues
MFDLQGFGALLLSGATVTIQLAMTSLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLLVLFIYYGGSILLMS
ILKKFGYNDYVEISAFWGGVMALSIAFGAYATEIFRMSIQEIPIGQREAAQAIGMRPFQTFYRITLPQVWQIALPGLGNL
FLVLLKDTALVSVVGLKDIMYQSSRAAQSTQQPFTFYMAAAIIYLGLTMLITGFMMWLEWRANPAARYAKKLSRQTTHRQ
STIG

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787087, Length=238, Percent_Identity=39.0756302521008, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=38.7665198237885, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1788226, Length=220, Percent_Identity=35, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=30.188679245283, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788645, Length=227, Percent_Identity=30.3964757709251, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786873, Length=199, Percent_Identity=30.6532663316583, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI87082239, Length=216, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786874, Length=209, Percent_Identity=24.8803827751196, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27035; Mature: 27035

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCC
>Mature Secondary Structure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HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]