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The map label for this gene is omlA [H]

Identifier: 93005121

GI number: 93005121

Start: 348684

End: 349100

Strand: Reverse

Name: omlA [H]

Synonym: Pcryo_0290

Alternate gene names: 93005121

Gene position: 349100-348684 (Counterclockwise)

Preceding gene: 93005123

Following gene: 93005116

Centisome position: 11.41

GC content: 41.25

Gene sequence:

>417_bases
ATGAGTCATCTTACCATGATAAAGACCCTAAATTTACGTCCGTTTCATTCTTCAAGCGCATTACGCAAGATTGTCATTAC
CAGCATATTGGGCGCCGCTGTTACCATGTCTGGCTGCTCGTTACTGAGTGTTTATAAGATTGATTTGCCACAAGGGACGC
CTATTACTCAAACCCAAGCACAAAAATTACAAGTGGGTATGAATCAAAATCAGGTACTATATCTTCTTGGTAGTCCAGCC
ATTAGAGATACCCTAGAGCCGAACCGTTGGGACTATATTTATGACTATCAAGCAGGGACTGAAGGTCAACGTAGAGGTAT
CGCTGACGTTAAAAACGCCAGTCAGCATCTAAAAGTATACTTTGATAATAATGGCATAGTGACTCGCATTCAGGGTTTAG
AGTCTCTACCTAAATAA

Upstream 100 bases:

>100_bases
CGTAAGTGGTAGGCAATTGCAAGTAAATGACGTATCATTTATCCAAGATTGTCGGTAAGACCAGCATCTACTGTGCTTAG
CCGTACCTAACCCATTTTTT

Downstream 100 bases:

>100_bases
TCGCTTCGATAGCGAGCTTTAATCCTCAGACTCGAGATTTACTTTTGCGCTGAGACATAGGATCAGCGCTTAAGCTTCTA
TATACCTCTATCCGATCAAA

Product: SmpA/OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSHLTMIKTLNLRPFHSSSALRKIVITSILGAAVTMSGCSLLSVYKIDLPQGTPITQTQAQKLQVGMNQNQVLYLLGSPA
IRDTLEPNRWDYIYDYQAGTEGQRRGIADVKNASQHLKVYFDNNGIVTRIQGLESLPK

Sequences:

>Translated_138_residues
MSHLTMIKTLNLRPFHSSSALRKIVITSILGAAVTMSGCSLLSVYKIDLPQGTPITQTQAQKLQVGMNQNQVLYLLGSPA
IRDTLEPNRWDYIYDYQAGTEGQRRGIADVKNASQHLKVYFDNNGIVTRIQGLESLPK
>Mature_137_residues
SHLTMIKTLNLRPFHSSSALRKIVITSILGAAVTMSGCSLLSVYKIDLPQGTPITQTQAQKLQVGMNQNQVLYLLGSPAI
RDTLEPNRWDYIYDYQAGTEGQRRGIADVKNASQHLKVYFDNNGIVTRIQGLESLPK

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=102, Percent_Identity=35.2941176470588, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 15333; Mature: 15202

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLTMIKTLNLRPFHSSSALRKIVITSILGAAVTMSGCSLLSVYKIDLPQGTPITQTQA
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHH
QKLQVGMNQNQVLYLLGSPAIRDTLEPNRWDYIYDYQAGTEGQRRGIADVKNASQHLKVY
HHHCCCCCCCCEEEEECCCCHHCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCEEEEE
FDNNGIVTRIQGLESLPK
ECCCCEEEEECCCCCCCC
>Mature Secondary Structure 
SHLTMIKTLNLRPFHSSSALRKIVITSILGAAVTMSGCSLLSVYKIDLPQGTPITQTQA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHH
QKLQVGMNQNQVLYLLGSPAIRDTLEPNRWDYIYDYQAGTEGQRRGIADVKNASQHLKVY
HHHCCCCCCCCEEEEECCCCHHCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCEEEEE
FDNNGIVTRIQGLESLPK
ECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]