| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is engB [H]
Identifier: 93005116
GI number: 93005116
Start: 344339
End: 345109
Strand: Reverse
Name: engB [H]
Synonym: Pcryo_0285
Alternate gene names: 93005116
Gene position: 345109-344339 (Counterclockwise)
Preceding gene: 93005121
Following gene: 93005113
Centisome position: 11.28
GC content: 44.49
Gene sequence:
>771_bases ATGAGTACCCCGTTCAACGATGTCGCCGCCAAGCATGCGGCTTTTAATACCAAAGCCCGTCAGCGTATTCAGCAAACTGA ATTTATGATGTCAGCACCAACCTTTCGTCTGTGTCCTGCAGATATAGGCTTAGAGGTGGCATTTGCTGGTCGCTCAAACG CTGGTAAGTCTTCTGCCATTAATGCGCTTACCAACCAGCGCCAATTGGCACGCTCATCTAAAACGCCTGGTCGTACGCAG ATGATTAACTTTTTTAATGTTGGTGATGCTGATAGACGATTGGTAGATTTGCCAGGTTATGGCTATGCCGCTGTACCGCT TGAGATGAAAAAAGAATGGCAGGTTGAGCTAGAAGAATATTTGGTATCGCGCTCAAGCCTTGCAGGTCTGGTTCTGATGA GCGATATCCGTCATCCATTGAAGTTCTTTGATGAGCAAATGCTACGTTGGGCAAAAGATGGTGAGCTGCCCGTTCATATC TTGTTAACGAAAGCAGATAAGCTAAAGTATGGTGCCTCTAAAAATGCGTTGCTTAATACTCGTAAAAGACTGAAAGAACT GGGTCTGAACTGTAGTATTCAGCTATTTTCAGCCTTAAGAAAAGAAGGTCTGGATGAATTAGCAGGCGTTATGGGTAACT GGTATGAGTATCAGCTGGATGCAGACAAAATTATTGAGTCCTCTTTTGCGTTGCTAGAAGGTGATGAGCTAGAAGACGCA ATCGAACAGGATGCGCTTCAAAAAGACAGCTCTCAACAAGACAGCAAATAA
Upstream 100 bases:
>100_bases TAGTAGCCAAAGATGCTGTGCTATTAACCGAGCAATTGCAAAATCTTTTACTATTTTATCTAAATTTAAGTATCTAAATT TTAACCGTAATGAGTCATTT
Downstream 100 bases:
>100_bases ATCTCATATCCTTCAATGAAAAAGGGTTTATCGTTATTATCGATAAACCCTTTTTTTGTTATCATTTTTATCATTTAAGC AGATTACCATTTACACCGAT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSTPFNDVAAKHAAFNTKARQRIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQ MINFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHPLKFFDEQMLRWAKDGELPVHI LLTKADKLKYGASKNALLNTRKRLKELGLNCSIQLFSALRKEGLDELAGVMGNWYEYQLDADKIIESSFALLEGDELEDA IEQDALQKDSSQQDSK
Sequences:
>Translated_256_residues MSTPFNDVAAKHAAFNTKARQRIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQ MINFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHPLKFFDEQMLRWAKDGELPVHI LLTKADKLKYGASKNALLNTRKRLKELGLNCSIQLFSALRKEGLDELAGVMGNWYEYQLDADKIIESSFALLEGDELEDA IEQDALQKDSSQQDSK >Mature_255_residues STPFNDVAAKHAAFNTKARQRIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQM INFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHPLKFFDEQMLRWAKDGELPVHIL LTKADKLKYGASKNALLNTRKRLKELGLNCSIQLFSALRKEGLDELAGVMGNWYEYQLDADKIIESSFALLEGDELEDAI EQDALQKDSSQQDSK
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=216, Percent_Identity=32.8703703703704, Blast_Score=78, Evalue=8e-15, Organism=Escherichia coli, GI145693205, Length=192, Percent_Identity=57.8125, Blast_Score=229, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320543, Length=131, Percent_Identity=33.587786259542, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 28682; Mature: 28551
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPFNDVAAKHAAFNTKARQRIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCHHHH NALTNQRQLARSSKTPGRTQMINFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEY HHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHH LVSRSSLAGLVLMSDIRHPLKFFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCHHHHHH RKRLKELGLNCSIQLFSALRKEGLDELAGVMGNWYEYQLDADKIIESSFALLEGDELEDA HHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHHH IEQDALQKDSSQQDSK HHHHHHHCCCCCCCCC >Mature Secondary Structure STPFNDVAAKHAAFNTKARQRIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCHHHH NALTNQRQLARSSKTPGRTQMINFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEY HHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHH LVSRSSLAGLVLMSDIRHPLKFFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCHHHHHH RKRLKELGLNCSIQLFSALRKEGLDELAGVMGNWYEYQLDADKIIESSFALLEGDELEDA HHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHHH IEQDALQKDSSQQDSK HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA