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The map label for this gene is glpD [H]

Identifier: 93004845

GI number: 93004845

Start: 16601

End: 18256

Strand: Reverse

Name: glpD [H]

Synonym: Pcryo_0014

Alternate gene names: 93004845

Gene position: 18256-16601 (Counterclockwise)

Preceding gene: 93004846

Following gene: 93004844

Centisome position: 0.6

GC content: 47.16

Gene sequence:

>1656_bases
ATGAACCGAGCTAATCAATATCAACAACGCCAGCAAGCATTAGCACCACTGTCTCGTTCTGAACCATGGGATATGCTCAT
CATCGGTGGCGGGATCACTGGTGCTGGTATTGCTCGCGAAGCAGCAAGGCGCGGCTTAGCAGTACTATTAATTGAACAAA
AAGACTTCGCTTGGGGCACCTCCAGCCGCTCAAGCAAAATGGTACATGGCGGGCTACGTTACATTGCCTCGGGCGATTTC
AAGACGACACTGCACAGCGTACGCGAGCGTGAACGCATGCTGAATGAAGCGAGTGGTCTCGTTAATGAGATGCACTATGT
CATGCCTCATTACAAAGGCAAGTTTCCACCGCCATGGATATTTAATAATCTGCTTAGGGTATATGATAAGCTCGCGGGTA
AGCACTACTTTAAGTACTTTGAAAAAGACGCCTTTCTTAGCCTTAACCCTCATATTAAACAAGATAAGTTTTTGGGTGCC
AGTCAATTTAGTGATGCTGTGACCGATGACTCACGGCTCGTGATGCGGGTATTGGACGAAGCTATTCATGATGGTGCGCA
TGCGATTAACTATCTTAAAGCAGAATCACTCATAACCACTGAACAAGGCTTAGTGGTGGGGGCTACTCTAAAAGATACCT
CGCCTCAACATAGCACCCATACTCACGACGTTCAGGCCAAAGTCGTGGTCAGTGCCACGGGCGCTTGGGCAGATACGTTA
CGGATGCAAGCCAGTCAGCAAACGGAACAAACCTTTCATAAGCAAATTCGTCCATCGCGTGGCAGTCATTTGGTGGTTAG
TCAAGAGCGCCTACCGCTCAATCAAGCGTATACCTTTTTGCATCCTGTCGATAAAAGAGCAATCTTTGTCTTTCCGTGGG
AGAACCGAACCGTTCTTGGTACTACTGATTTGGACCATCCACCCTTAGATGATACAGAAGTCGGCATTACCAATGCTGAG
GTGGACTATCTTTTGACCGCGACCAACGATCTTTTTGATGATGTAGATATTAGCCGCAAGGATGTCATCAGCTCATGGGC
AGGCGTGCGACCACTGATTTCTGATGGCAATGATGGTAAGCGCGTCAGTCCTAGTAAGGAAAAACGCGATCATAGCGTCT
GGTTGGATAATAATCTGGTCACTGTAAGCGGTGGCAAATTAACCACCTTTCGCCTAATCGCCCTTGATGTACTAAAAGTC
TGTCAAAAGGTGCTCGAACTCGATGAATCAGCTACTCAAGATAATGTGTTATATAGCAGCCAAGTTTTTAGCAAGCAAAC
CTCAACCAATCCTAAATTTACTGCCCTGCCGCTACCATTACAACAGCGCTTAAAAGGTTTTTATGGCCTACAGCTCGATA
CTTTGCTAGAGCTGGCTCATGACGATGACTTGGCTTATGTGACCGATAGCAATACCATTTGGGCGGAGATTCGCTTTGCT
GCTCGCTATGAGCAGGTTATTCATTTGGATGATTTATTACTACGACGCACGCGCTTGGGTCTTATATTGCCCAATGGTGC
GATGACCCCGCTAATCAGTCAGCGAGTCAAGCAAATATGTCAGCAGGAGCTAGGCTGGGATGAGCAAAAATGGCAGCAAG
AGGCTGACCGTTATCAAGCCTTATGGCAACGCTACTATTATCTGCCTGTGGCTTAG

Upstream 100 bases:

>100_bases
TATAATATAGTGTATTTATTTTATTTAGTAACGACTATGAATTAGATTATTTGGATAACATACATAGTTGAAATTAAATA
ACAATTAAAATGAGTCGTCT

Downstream 100 bases:

>100_bases
CGCTTTTTTATATCCTAATTTATCTATACTAAACTCAGTGTTGAAAAGATATGACGGAACTGGGATGATTTTTTTAGCCT
CTATCGGCGTAGGCACAGCA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MNRANQYQQRQQALAPLSRSEPWDMLIIGGGITGAGIAREAARRGLAVLLIEQKDFAWGTSSRSSKMVHGGLRYIASGDF
KTTLHSVRERERMLNEASGLVNEMHYVMPHYKGKFPPPWIFNNLLRVYDKLAGKHYFKYFEKDAFLSLNPHIKQDKFLGA
SQFSDAVTDDSRLVMRVLDEAIHDGAHAINYLKAESLITTEQGLVVGATLKDTSPQHSTHTHDVQAKVVVSATGAWADTL
RMQASQQTEQTFHKQIRPSRGSHLVVSQERLPLNQAYTFLHPVDKRAIFVFPWENRTVLGTTDLDHPPLDDTEVGITNAE
VDYLLTATNDLFDDVDISRKDVISSWAGVRPLISDGNDGKRVSPSKEKRDHSVWLDNNLVTVSGGKLTTFRLIALDVLKV
CQKVLELDESATQDNVLYSSQVFSKQTSTNPKFTALPLPLQQRLKGFYGLQLDTLLELAHDDDLAYVTDSNTIWAEIRFA
ARYEQVIHLDDLLLRRTRLGLILPNGAMTPLISQRVKQICQQELGWDEQKWQQEADRYQALWQRYYYLPVA

Sequences:

>Translated_551_residues
MNRANQYQQRQQALAPLSRSEPWDMLIIGGGITGAGIAREAARRGLAVLLIEQKDFAWGTSSRSSKMVHGGLRYIASGDF
KTTLHSVRERERMLNEASGLVNEMHYVMPHYKGKFPPPWIFNNLLRVYDKLAGKHYFKYFEKDAFLSLNPHIKQDKFLGA
SQFSDAVTDDSRLVMRVLDEAIHDGAHAINYLKAESLITTEQGLVVGATLKDTSPQHSTHTHDVQAKVVVSATGAWADTL
RMQASQQTEQTFHKQIRPSRGSHLVVSQERLPLNQAYTFLHPVDKRAIFVFPWENRTVLGTTDLDHPPLDDTEVGITNAE
VDYLLTATNDLFDDVDISRKDVISSWAGVRPLISDGNDGKRVSPSKEKRDHSVWLDNNLVTVSGGKLTTFRLIALDVLKV
CQKVLELDESATQDNVLYSSQVFSKQTSTNPKFTALPLPLQQRLKGFYGLQLDTLLELAHDDDLAYVTDSNTIWAEIRFA
ARYEQVIHLDDLLLRRTRLGLILPNGAMTPLISQRVKQICQQELGWDEQKWQQEADRYQALWQRYYYLPVA
>Mature_551_residues
MNRANQYQQRQQALAPLSRSEPWDMLIIGGGITGAGIAREAARRGLAVLLIEQKDFAWGTSSRSSKMVHGGLRYIASGDF
KTTLHSVRERERMLNEASGLVNEMHYVMPHYKGKFPPPWIFNNLLRVYDKLAGKHYFKYFEKDAFLSLNPHIKQDKFLGA
SQFSDAVTDDSRLVMRVLDEAIHDGAHAINYLKAESLITTEQGLVVGATLKDTSPQHSTHTHDVQAKVVVSATGAWADTL
RMQASQQTEQTFHKQIRPSRGSHLVVSQERLPLNQAYTFLHPVDKRAIFVFPWENRTVLGTTDLDHPPLDDTEVGITNAE
VDYLLTATNDLFDDVDISRKDVISSWAGVRPLISDGNDGKRVSPSKEKRDHSVWLDNNLVTVSGGKLTTFRLIALDVLKV
CQKVLELDESATQDNVLYSSQVFSKQTSTNPKFTALPLPLQQRLKGFYGLQLDTLLELAHDDDLAYVTDSNTIWAEIRFA
ARYEQVIHLDDLLLRRTRLGLILPNGAMTPLISQRVKQICQQELGWDEQKWQQEADRYQALWQRYYYLPVA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=563, Percent_Identity=29.8401420959147, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI285002231, Length=563, Percent_Identity=29.8401420959147, Blast_Score=207, Evalue=3e-53,
Organism=Escherichia coli, GI2367226, Length=499, Percent_Identity=30.8617234468938, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1788574, Length=486, Percent_Identity=26.7489711934156, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI115534726, Length=556, Percent_Identity=31.294964028777, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17509253, Length=566, Percent_Identity=30.7420494699647, Blast_Score=191, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322036, Length=594, Percent_Identity=27.1043771043771, Blast_Score=177, Evalue=5e-45,
Organism=Drosophila melanogaster, GI161077125, Length=571, Percent_Identity=31.1733800350263, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24653942, Length=571, Percent_Identity=31.1733800350263, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24653944, Length=571, Percent_Identity=31.1733800350263, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI20130025, Length=571, Percent_Identity=31.1733800350263, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24586295, Length=563, Percent_Identity=27.1758436944938, Blast_Score=145, Evalue=8e-35,
Organism=Drosophila melanogaster, GI19921278, Length=551, Percent_Identity=26.6787658802178, Blast_Score=139, Evalue=8e-33,
Organism=Drosophila melanogaster, GI45550977, Length=409, Percent_Identity=24.6943765281174, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 62443; Mature: 62443

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRANQYQQRQQALAPLSRSEPWDMLIIGGGITGAGIAREAARRGLAVLLIEQKDFAWGT
CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCC
SSRSSKMVHGGLRYIASGDFKTTLHSVRERERMLNEASGLVNEMHYVMPHYKGKFPPPWI
CCCCCHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
FNNLLRVYDKLAGKHYFKYFEKDAFLSLNPHIKQDKFLGASQFSDAVTDDSRLVMRVLDE
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
AIHDGAHAINYLKAESLITTEQGLVVGATLKDTSPQHSTHTHDVQAKVVVSATGAWADTL
HHHCHHHHHHHHHHHHEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHH
RMQASQQTEQTFHKQIRPSRGSHLVVSQERLPLNQAYTFLHPVDKRAIFVFPWENRTVLG
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHEECCCCEEEEEECCCCEEEE
TTDLDHPPLDDTEVGITNAEVDYLLTATNDLFDDVDISRKDVISSWAGVRPLISDGNDGK
CCCCCCCCCCCCCCCEECCCEEEEEEECCHHHCCCCCCHHHHHHHHCCCCCHHCCCCCCC
RVSPSKEKRDHSVWLDNNLVTVSGGKLTTFRLIALDVLKVCQKVLELDESATQDNVLYSS
CCCCCHHCCCCEEEECCCEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
QVFSKQTSTNPKFTALPLPLQQRLKGFYGLQLDTLLELAHDDDLAYVTDSNTIWAEIRFA
HHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCEEEEEEEHH
ARYEQVIHLDDLLLRRTRLGLILPNGAMTPLISQRVKQICQQELGWDEQKWQQEADRYQA
HHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LWQRYYYLPVA
HHHHHEEECCC
>Mature Secondary Structure
MNRANQYQQRQQALAPLSRSEPWDMLIIGGGITGAGIAREAARRGLAVLLIEQKDFAWGT
CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCC
SSRSSKMVHGGLRYIASGDFKTTLHSVRERERMLNEASGLVNEMHYVMPHYKGKFPPPWI
CCCCCHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
FNNLLRVYDKLAGKHYFKYFEKDAFLSLNPHIKQDKFLGASQFSDAVTDDSRLVMRVLDE
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
AIHDGAHAINYLKAESLITTEQGLVVGATLKDTSPQHSTHTHDVQAKVVVSATGAWADTL
HHHCHHHHHHHHHHHHEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHH
RMQASQQTEQTFHKQIRPSRGSHLVVSQERLPLNQAYTFLHPVDKRAIFVFPWENRTVLG
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHEECCCCEEEEEECCCCEEEE
TTDLDHPPLDDTEVGITNAEVDYLLTATNDLFDDVDISRKDVISSWAGVRPLISDGNDGK
CCCCCCCCCCCCCCCEECCCEEEEEEECCHHHCCCCCCHHHHHHHHCCCCCHHCCCCCCC
RVSPSKEKRDHSVWLDNNLVTVSGGKLTTFRLIALDVLKVCQKVLELDESATQDNVLYSS
CCCCCHHCCCCEEEECCCEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
QVFSKQTSTNPKFTALPLPLQQRLKGFYGLQLDTLLELAHDDDLAYVTDSNTIWAEIRFA
HHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCEEEEEEEHH
ARYEQVIHLDDLLLRRTRLGLILPNGAMTPLISQRVKQICQQELGWDEQKWQQEADRYQA
HHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LWQRYYYLPVA
HHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA