Click here to switch to the map view.

The map label for this gene is ygcE [H]

Identifier: 93004844

GI number: 93004844

Start: 14853

End: 16421

Strand: Reverse

Name: ygcE [H]

Synonym: Pcryo_0013

Alternate gene names: 93004844

Gene position: 16421-14853 (Counterclockwise)

Preceding gene: 93004845

Following gene: 93004842

Centisome position: 0.54

GC content: 48.82

Gene sequence:

>1569_bases
ATGACCGACAACTTTGATGCGCCTATTTATTTCTTAGCTATCGACAATGGCACCCAAAGCGTGAGAGCGCTTATCTTTGA
TCAATTCGGCACCGAGATAGCCAAAGCACGCGTCCCTATCGAGCCGTATTTTTCTGAGCAGCCTAGTTTTGCCGAGCAAC
ATGCTGACTACTATTGGCAAAAATTAAGCGAGGCCTGTCAGCAGTTGTGGCAAACCTGCGATATTAGCCCAGCGCAAATT
GCCGGCGTCAGTCTCGCCACCCAGCGCTATACCATGATATGTTTGGACAAGGATAAACAACCGCTACGTCCAGCCATTGT
GTGGATGGATTTGCGTCGCGGCGAGAACAATGACATAGGCTTTCTAGGTCCACTCACCAAAGTCATCGGTATGGGCGAGC
TGGTACAAGAGGCGCAGCAAAAAGCACGCTGTAATTGGCTTGCGCATCATGAACCAGAAATGTGGGCAAAAACCACTCAT
TATGTCAATTTATCCGCGTACCTCACCTATCAGCTCACAGGCGAGATTGCCGACTCTACTGGTCATGCCTTAGGCTATCT
GCCTTACGATTACAAAGCGCAAGCATGGTTTAAGCCAAACAACATCAAATGGCGACTGTTTAGTTGCCGACTAGAGCAAA
TGCCCAAACTTATGCCACCTGGGCAGCTACTTGGTCATATTACCGCTCACGCTGCCGCCGCTACTGGTATTCTTGAAGGC
ACGCCAATGATTGCTGCCGCCAGTGATAAAGCGTGCGAAGCGTTGGGTTCCGCCGGACTTGCCGCCGATACCGCCTGCTT
AAGCTTTGGCACTACTGCGACTATTAATACCACGTCGAGCCATTATATTGAGATACTCAAGCACATGCCCGCTTATACCG
CCGCCGCGCCAAATTACTACAATCATGAGTATATGATTTATCGCGGCTTTTGGATGGTCAGCTGGTTTAAGGAGCAATTT
GCCCAGTATGAAGAGCAACTGGCAAAAACGCAGGGTGTTGATACTGAAAAACTACTCGATAAGGCAGTCAAAGACATTCC
AGCAGGCTGTATGGGTTTGATGATGCAGCCGTACTGGTCGCCCGGTGTTCGTCATCCGGGTCTTGAAGGCAAAGGTGCGC
TTATTGGTTTTGGTGATGTACATACGCGAGCGCATGTCTACCGCGCTATTTTGGAAGGGCTGGCTTATGAGCTAAAGCTT
GGTTTTGATACCATTGAGAAGCGTACAGGCAAAGCCATTAAACATCTGCGTGTGTCTGGCGGTGGTTCCCAAAGTGACTC
AGCGATGCAACTGACGGCAGATATCTTCGGTATGCCCGCTTATCGACCGCATACTTATGAAGCCTCAGGCTTAGGCGCTG
CTATCAATTGTGCGGTGGGACTTGGCGTTTATCCCGACCATTTAACCGCAACTCAGGCCATGACCCATTTGGGTGATGGA
TTCTTACCTATCGAAGCCAATGTCCAGCTCTACAAACGCCTTTATAATGAGGTTTATCTCAAAATGTATGAGCGCTTAAA
GCCTTTATATCAAAGCATTCAAGATATTACGGGTTATCCAGCTAAGTAA

Upstream 100 bases:

>100_bases
TCTATCGGCGTAGGCACAGCAAGCTAGAAAAATTAATACCCGTTCCGCTTTATACTCTAAGTTAGCTTCAATCTATATTC
CCACATAGTTAAGGATGACT

Downstream 100 bases:

>100_bases
TACAGTCAGTTCGATATAAAAGAGGCATGTTAAAAATAGCGTTATGCTGGGATAAACTTTCCTCGCTTGCTGTGCACTTC
GCACTCCAGAAGCTTCGCAA

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MTDNFDAPIYFLAIDNGTQSVRALIFDQFGTEIAKARVPIEPYFSEQPSFAEQHADYYWQKLSEACQQLWQTCDISPAQI
AGVSLATQRYTMICLDKDKQPLRPAIVWMDLRRGENNDIGFLGPLTKVIGMGELVQEAQQKARCNWLAHHEPEMWAKTTH
YVNLSAYLTYQLTGEIADSTGHALGYLPYDYKAQAWFKPNNIKWRLFSCRLEQMPKLMPPGQLLGHITAHAAAATGILEG
TPMIAAASDKACEALGSAGLAADTACLSFGTTATINTTSSHYIEILKHMPAYTAAAPNYYNHEYMIYRGFWMVSWFKEQF
AQYEEQLAKTQGVDTEKLLDKAVKDIPAGCMGLMMQPYWSPGVRHPGLEGKGALIGFGDVHTRAHVYRAILEGLAYELKL
GFDTIEKRTGKAIKHLRVSGGGSQSDSAMQLTADIFGMPAYRPHTYEASGLGAAINCAVGLGVYPDHLTATQAMTHLGDG
FLPIEANVQLYKRLYNEVYLKMYERLKPLYQSIQDITGYPAK

Sequences:

>Translated_522_residues
MTDNFDAPIYFLAIDNGTQSVRALIFDQFGTEIAKARVPIEPYFSEQPSFAEQHADYYWQKLSEACQQLWQTCDISPAQI
AGVSLATQRYTMICLDKDKQPLRPAIVWMDLRRGENNDIGFLGPLTKVIGMGELVQEAQQKARCNWLAHHEPEMWAKTTH
YVNLSAYLTYQLTGEIADSTGHALGYLPYDYKAQAWFKPNNIKWRLFSCRLEQMPKLMPPGQLLGHITAHAAAATGILEG
TPMIAAASDKACEALGSAGLAADTACLSFGTTATINTTSSHYIEILKHMPAYTAAAPNYYNHEYMIYRGFWMVSWFKEQF
AQYEEQLAKTQGVDTEKLLDKAVKDIPAGCMGLMMQPYWSPGVRHPGLEGKGALIGFGDVHTRAHVYRAILEGLAYELKL
GFDTIEKRTGKAIKHLRVSGGGSQSDSAMQLTADIFGMPAYRPHTYEASGLGAAINCAVGLGVYPDHLTATQAMTHLGDG
FLPIEANVQLYKRLYNEVYLKMYERLKPLYQSIQDITGYPAK
>Mature_521_residues
TDNFDAPIYFLAIDNGTQSVRALIFDQFGTEIAKARVPIEPYFSEQPSFAEQHADYYWQKLSEACQQLWQTCDISPAQIA
GVSLATQRYTMICLDKDKQPLRPAIVWMDLRRGENNDIGFLGPLTKVIGMGELVQEAQQKARCNWLAHHEPEMWAKTTHY
VNLSAYLTYQLTGEIADSTGHALGYLPYDYKAQAWFKPNNIKWRLFSCRLEQMPKLMPPGQLLGHITAHAAAATGILEGT
PMIAAASDKACEALGSAGLAADTACLSFGTTATINTTSSHYIEILKHMPAYTAAAPNYYNHEYMIYRGFWMVSWFKEQFA
QYEEQLAKTQGVDTEKLLDKAVKDIPAGCMGLMMQPYWSPGVRHPGLEGKGALIGFGDVHTRAHVYRAILEGLAYELKLG
FDTIEKRTGKAIKHLRVSGGGSQSDSAMQLTADIFGMPAYRPHTYEASGLGAAINCAVGLGVYPDHLTATQAMTHLGDGF
LPIEANVQLYKRLYNEVYLKMYERLKPLYQSIQDITGYPAK

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=482, Percent_Identity=21.3692946058091, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI189409120, Length=482, Percent_Identity=21.5767634854772, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI4504007, Length=482, Percent_Identity=21.5767634854772, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI41393575, Length=475, Percent_Identity=21.2631578947368, Blast_Score=92, Evalue=1e-18,
Organism=Escherichia coli, GI1789138, Length=491, Percent_Identity=30.9572301425662, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1790005, Length=531, Percent_Identity=26.3653483992467, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1787789, Length=472, Percent_Identity=25.4237288135593, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1789987, Length=449, Percent_Identity=25.1670378619154, Blast_Score=102, Evalue=5e-23,
Organism=Drosophila melanogaster, GI17864214, Length=477, Percent_Identity=24.1090146750524, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24654573, Length=406, Percent_Identity=23.3990147783251, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24655555, Length=477, Percent_Identity=23.4800838574423, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655560, Length=477, Percent_Identity=23.4800838574423, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655570, Length=477, Percent_Identity=23.4800838574423, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655574, Length=477, Percent_Identity=23.4800838574423, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24655565, Length=477, Percent_Identity=23.4800838574423, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: NA

Molecular weight: Translated: 58121; Mature: 57990

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNFDAPIYFLAIDNGTQSVRALIFDQFGTEIAKARVPIEPYFSEQPSFAEQHADYYWQ
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
KLSEACQQLWQTCDISPAQIAGVSLATQRYTMICLDKDKQPLRPAIVWMDLRRGENNDIG
HHHHHHHHHHHHCCCCHHHHCCCEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC
FLGPLTKVIGMGELVQEAQQKARCNWLAHHEPEMWAKTTHYVNLSAYLTYQLTGEIADST
CHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEEEEEEEEEEEEEECCCC
GHALGYLPYDYKAQAWFKPNNIKWRLFSCRLEQMPKLMPPGQLLGHITAHAAAATGILEG
CCEEEECCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
TPMIAAASDKACEALGSAGLAADTACLSFGTTATINTTSSHYIEILKHMPAYTAAAPNYY
CCCEEECCCHHHHHHCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHCCCCCCC
NHEYMIYRGFWMVSWFKEQFAQYEEQLAKTQGVDTEKLLDKAVKDIPAGCMGLMMQPYWS
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
PGVRHPGLEGKGALIGFGDVHTRAHVYRAILEGLAYELKLGFDTIEKRTGKAIKHLRVSG
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHEEECC
GGSQSDSAMQLTADIFGMPAYRPHTYEASGLGAAINCAVGLGVYPDHLTATQAMTHLGDG
CCCCCCCHHEEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC
FLPIEANVQLYKRLYNEVYLKMYERLKPLYQSIQDITGYPAK
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDNFDAPIYFLAIDNGTQSVRALIFDQFGTEIAKARVPIEPYFSEQPSFAEQHADYYWQ
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
KLSEACQQLWQTCDISPAQIAGVSLATQRYTMICLDKDKQPLRPAIVWMDLRRGENNDIG
HHHHHHHHHHHHCCCCHHHHCCCEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCC
FLGPLTKVIGMGELVQEAQQKARCNWLAHHEPEMWAKTTHYVNLSAYLTYQLTGEIADST
CHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEEEEEEEEEEEEEECCCC
GHALGYLPYDYKAQAWFKPNNIKWRLFSCRLEQMPKLMPPGQLLGHITAHAAAATGILEG
CCEEEECCCCCCEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
TPMIAAASDKACEALGSAGLAADTACLSFGTTATINTTSSHYIEILKHMPAYTAAAPNYY
CCCEEECCCHHHHHHCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCHHCCCCCCC
NHEYMIYRGFWMVSWFKEQFAQYEEQLAKTQGVDTEKLLDKAVKDIPAGCMGLMMQPYWS
CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
PGVRHPGLEGKGALIGFGDVHTRAHVYRAILEGLAYELKLGFDTIEKRTGKAIKHLRVSG
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHEEECC
GGSQSDSAMQLTADIFGMPAYRPHTYEASGLGAAINCAVGLGVYPDHLTATQAMTHLGDG
CCCCCCCHHEEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC
FLPIEANVQLYKRLYNEVYLKMYERLKPLYQSIQDITGYPAK
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]