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The map label for this gene is opuAC [H]

Identifier: 92115003

GI number: 92115003

Start: 3217201

End: 3218061

Strand: Direct

Name: opuAC [H]

Synonym: Csal_2886

Alternate gene names: 92115003

Gene position: 3217201-3218061 (Clockwise)

Preceding gene: 92115002

Following gene: 92115011

Centisome position: 87.03

GC content: 62.6

Gene sequence:

>861_bases
ATGAAAACGACTTTGTGCTCCCTGGCCGCCGCGGCAATCTTCACGGCCGCCACGACCGCCCAAGCCGAGGACAAGACGCT
GGTGATCGGCACCAACAACTGGGCCGAGAACATCGCGGTCGCCAACATGTGGAAGCTCATCCTCGAGAATCGGTACGACT
ACGATGTCGAACTCTCCGATGTCAGCAAGAACGCCCTCTACAGCGGCCTTGCCAACAGCGACTTCGACATCTCGCTCGAA
ATCTGGCTCCCCAACACCGATGCGCGCTATCTCGAGCCCTACAAGGATCAGCTCGAAATCAACGGCGCCTGGTACGAAGG
CACCGGGCTAGGCCTGGTGGTGCCGAGCTATGCCGACATCGACACCATTCCCGAACTCAAGGAGCAAGCCGAGGAATACG
GCTACCAGGGCAGCCCCAGCATTCTGGGCATCGACTCCGGCTCGGCGATCGCCGGTCTGACCGACGAGGCCATCGACGCG
TACGACCTCCCCATGGAACAGGTCAACAGCTCCGGGCCGGCGATGATGGCCGCGCTGGATGCGGCCTACCAGCAGGAAGA
GCCGATCGTCGTGACGCTGTGGAGCCCGCACTGGGCCTTTGCCGAGTACGACCTCAAGTACCTCGAGGATCCCAAGAACG
TCTACGGCGACAACGAAACCATCTACTGGTTCTCGCGCCCGGGCTTCACCGAGGACGATCCCTGGCTCACCGAGGTGCTC
AACGCCTGGCACATGGACGATGACAGCCTGGGCGGCCTGATGGCCGAGATCGAACAGGCCGGCGACCCGGTGGAAGGGGC
CGAGACCTGGATCGAGGACAATCAGGACCTCATCGACGAGTGGCTCGCCGCCGGCGAATGA

Upstream 100 bases:

>100_bases
TCCCTCGGCGACCGAACGATGCGACGACAACGTCGCCACCCTGACCGGGCCATGCTGTATAGACGCTTGCTTTTCCCACC
ACCCAACGAGGAATGACAAC

Downstream 100 bases:

>100_bases
CCTGCCAGTCACCGCGTCCGATCCACACGAGGCCTGATCCAAATGGGGCCTCGTCCGCAACGACAAGCGCCCCGGCATGC
GATATGCCGGGGCGCTTTTG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKTTLCSLAAAAIFTAATTAQAEDKTLVIGTNNWAENIAVANMWKLILENRYDYDVELSDVSKNALYSGLANSDFDISLE
IWLPNTDARYLEPYKDQLEINGAWYEGTGLGLVVPSYADIDTIPELKEQAEEYGYQGSPSILGIDSGSAIAGLTDEAIDA
YDLPMEQVNSSGPAMMAALDAAYQQEEPIVVTLWSPHWAFAEYDLKYLEDPKNVYGDNETIYWFSRPGFTEDDPWLTEVL
NAWHMDDDSLGGLMAEIEQAGDPVEGAETWIEDNQDLIDEWLAAGE

Sequences:

>Translated_286_residues
MKTTLCSLAAAAIFTAATTAQAEDKTLVIGTNNWAENIAVANMWKLILENRYDYDVELSDVSKNALYSGLANSDFDISLE
IWLPNTDARYLEPYKDQLEINGAWYEGTGLGLVVPSYADIDTIPELKEQAEEYGYQGSPSILGIDSGSAIAGLTDEAIDA
YDLPMEQVNSSGPAMMAALDAAYQQEEPIVVTLWSPHWAFAEYDLKYLEDPKNVYGDNETIYWFSRPGFTEDDPWLTEVL
NAWHMDDDSLGGLMAEIEQAGDPVEGAETWIEDNQDLIDEWLAAGE
>Mature_286_residues
MKTTLCSLAAAAIFTAATTAQAEDKTLVIGTNNWAENIAVANMWKLILENRYDYDVELSDVSKNALYSGLANSDFDISLE
IWLPNTDARYLEPYKDQLEINGAWYEGTGLGLVVPSYADIDTIPELKEQAEEYGYQGSPSILGIDSGSAIAGLTDEAIDA
YDLPMEQVNSSGPAMMAALDAAYQQEEPIVVTLWSPHWAFAEYDLKYLEDPKNVYGDNETIYWFSRPGFTEDDPWLTEVL
NAWHMDDDSLGGLMAEIEQAGDPVEGAETWIEDNQDLIDEWLAAGE

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 31682; Mature: 31682

Theoretical pI: Translated: 3.51; Mature: 3.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLCSLAAAAIFTAATTAQAEDKTLVIGTNNWAENIAVANMWKLILENRYDYDVELSD
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHH
VSKNALYSGLANSDFDISLEIWLPNTDARYLEPYKDQLEINGAWYEGTGLGLVVPSYADI
CCHHHHHHCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEECCEEECCCCCEEEECCCCCC
DTIPELKEQAEEYGYQGSPSILGIDSGSAIAGLTDEAIDAYDLPMEQVNSSGPAMMAALD
CCCHHHHHHHHHCCCCCCCCEEEECCCCEEECCCHHHCCHHCCCHHHHCCCCCHHHHHHH
AAYQQEEPIVVTLWSPHWAFAEYDLKYLEDPKNVYGDNETIYWFSRPGFTEDDPWLTEVL
HHHCCCCCEEEEEECCCCCHHHCCHHHHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHH
NAWHMDDDSLGGLMAEIEQAGDPVEGAETWIEDNQDLIDEWLAAGE
HHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKTTLCSLAAAAIFTAATTAQAEDKTLVIGTNNWAENIAVANMWKLILENRYDYDVELSD
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEHHH
VSKNALYSGLANSDFDISLEIWLPNTDARYLEPYKDQLEINGAWYEGTGLGLVVPSYADI
CCHHHHHHCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEECCEEECCCCCEEEECCCCCC
DTIPELKEQAEEYGYQGSPSILGIDSGSAIAGLTDEAIDAYDLPMEQVNSSGPAMMAALD
CCCHHHHHHHHHCCCCCCCCEEEECCCCEEECCCHHHCCHHCCCHHHHCCCCCHHHHHHH
AAYQQEEPIVVTLWSPHWAFAEYDLKYLEDPKNVYGDNETIYWFSRPGFTEDDPWLTEVL
HHHCCCCCEEEEEECCCCCHHHCCHHHHCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHH
NAWHMDDDSLGGLMAEIEQAGDPVEGAETWIEDNQDLIDEWLAAGE
HHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]