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The map label for this gene is dadA [H]

Identifier: 92114826

GI number: 92114826

Start: 3034935

End: 3036257

Strand: Direct

Name: dadA [H]

Synonym: Csal_2708

Alternate gene names: 92114826

Gene position: 3034935-3036257 (Clockwise)

Preceding gene: 92114825

Following gene: 92114827

Centisome position: 82.1

GC content: 67.42

Gene sequence:

>1323_bases
ATGGGCTCACAGGATCAGGCCGTCCACGACAATGCCGATCAGGCCGACGTCATCGTCGTCGGGGCCGGCGTGATCGGTAT
CGTCAGCGCCCTCGCGCTGAGTCGCCGAGGCTTGAACGTGATGGTGGTGGACAAGCAGGCCCCCGGCATGGGGGCTTCCT
TCGGCAACGCGGGCCACATGGCCACCGAGCAGGTCTTTCCCATCGCCGATGCGTCGATCATCAAGCGCCTGCCTGGCATG
CTGATGGACCCCAAGGGGCCACTGCGTCTGGACTGGCGCTATCTTCCCAAGGCGCTGCCCTGGTTCATCCGCCTGCTGTC
GAATCTGCGTCCGGCGCCTTACCAGGCCAGCGTGAGCGGTCTCCGTGCTCTCAACGAGGCAAGTCTCGACGCCTGGCGAC
GGCTCCTCGACACGGTCGATGGTGCCCACCTGCTCAAGCAGGACGGTTCCTTCATGGTCTACGAGCAGGACAACTCGTTG
GCCGCGCTGCAGGCATTGCAAGCCTGCATGGCAACCCAGGGCGTGCCGGTCGAATCCTGGTCGGGCAACGCCATCCGCGA
TGTGGCGCCACAACTTTCCGACGCGATTCGCGGCGGCCTGTTCTTTCCTGCGACCGGCCATGTCGTCGATCCTCTCGCGC
TCGTCCGGCACCTGGTGACGGCGGCCAAGTCGGCGGGCGTCACCTTCCGTCAGGACGACGTCGTCTCCGGCCACGTTCAT
GCCCAGGGAGTCACGCTCGAGGCGGCCGGCGCCGGGCGGCTCCACGGCCGCCAGGTGCTGGTGGCCTGTGGCGCTCACTC
GGCACCGCTCACCGCCCGCCTCACCGGGATACGCGTCCCGCTGGATACCGAGCGAGGCTATCACCTGATGCTGCCCGGCG
AGCAGTCGCGCCTGCCCCTGGCGGTCACGTCGCTGGAGCGTCGCTTCATCATGACACCGATGACGGACGGCCTGCGTCTG
GCGGGCACCGTCGAATTCGCGGGACTGAAACGACCGCCCGACATGGAAAGGGCCTGGCAGCTGCATCGCTTGAGCCAGGG
CCTGTTCAAGACGCCCCTCGATGCCGCCGCAGCGACCCCCTGGATGGGGTTTCGTCCCTCGCTGCCCGATTCGCTGCCCG
TCATCGATAGCGCGCAAGACGGCAGGGTACTGCTGGCGTTCGGGCATCACCATCTGGGGCTTACCCAGGCCGCGGTGACG
GCCGAACTGGTGGCCGAGCTGGCAACGTCAGGCGCCACGGAAGCCGGCACTTCCCGGCAGCCGCCTTCTGTCCGTGACCG
AGCACTTCCCGAGCTGGCGCCTTACCGGCTCGATCGCTTCTAG

Upstream 100 bases:

>100_bases
CATCACGACTTTGGTCGACGCGGTATTGAAGCCGGCATCGACATATCTTATATTTTATACAATCGACAAATACAACAGGC
ACCACCGCGAGGAAATCTCC

Downstream 100 bases:

>100_bases
ACGCAATCCCCTCAACTCAGACAACAAGACCGAAGGAGATCTTATGTCCTCACCTCAAGGCCCCACTAGGCTACCCGGCA
TGATGGAGGTGCTCGCCGTC

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MGSQDQAVHDNADQADVIVVGAGVIGIVSALALSRRGLNVMVVDKQAPGMGASFGNAGHMATEQVFPIADASIIKRLPGM
LMDPKGPLRLDWRYLPKALPWFIRLLSNLRPAPYQASVSGLRALNEASLDAWRRLLDTVDGAHLLKQDGSFMVYEQDNSL
AALQALQACMATQGVPVESWSGNAIRDVAPQLSDAIRGGLFFPATGHVVDPLALVRHLVTAAKSAGVTFRQDDVVSGHVH
AQGVTLEAAGAGRLHGRQVLVACGAHSAPLTARLTGIRVPLDTERGYHLMLPGEQSRLPLAVTSLERRFIMTPMTDGLRL
AGTVEFAGLKRPPDMERAWQLHRLSQGLFKTPLDAAAATPWMGFRPSLPDSLPVIDSAQDGRVLLAFGHHHLGLTQAAVT
AELVAELATSGATEAGTSRQPPSVRDRALPELAPYRLDRF

Sequences:

>Translated_440_residues
MGSQDQAVHDNADQADVIVVGAGVIGIVSALALSRRGLNVMVVDKQAPGMGASFGNAGHMATEQVFPIADASIIKRLPGM
LMDPKGPLRLDWRYLPKALPWFIRLLSNLRPAPYQASVSGLRALNEASLDAWRRLLDTVDGAHLLKQDGSFMVYEQDNSL
AALQALQACMATQGVPVESWSGNAIRDVAPQLSDAIRGGLFFPATGHVVDPLALVRHLVTAAKSAGVTFRQDDVVSGHVH
AQGVTLEAAGAGRLHGRQVLVACGAHSAPLTARLTGIRVPLDTERGYHLMLPGEQSRLPLAVTSLERRFIMTPMTDGLRL
AGTVEFAGLKRPPDMERAWQLHRLSQGLFKTPLDAAAATPWMGFRPSLPDSLPVIDSAQDGRVLLAFGHHHLGLTQAAVT
AELVAELATSGATEAGTSRQPPSVRDRALPELAPYRLDRF
>Mature_439_residues
GSQDQAVHDNADQADVIVVGAGVIGIVSALALSRRGLNVMVVDKQAPGMGASFGNAGHMATEQVFPIADASIIKRLPGML
MDPKGPLRLDWRYLPKALPWFIRLLSNLRPAPYQASVSGLRALNEASLDAWRRLLDTVDGAHLLKQDGSFMVYEQDNSLA
ALQALQACMATQGVPVESWSGNAIRDVAPQLSDAIRGGLFFPATGHVVDPLALVRHLVTAAKSAGVTFRQDDVVSGHVHA
QGVTLEAAGAGRLHGRQVLVACGAHSAPLTARLTGIRVPLDTERGYHLMLPGEQSRLPLAVTSLERRFIMTPMTDGLRLA
GTVEFAGLKRPPDMERAWQLHRLSQGLFKTPLDAAAATPWMGFRPSLPDSLPVIDSAQDGRVLLAFGHHHLGLTQAAVTA
ELVAELATSGATEAGTSRQPPSVRDRALPELAPYRLDRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=411, Percent_Identity=25.7907542579075, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47068; Mature: 46936

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSQDQAVHDNADQADVIVVGAGVIGIVSALALSRRGLNVMVVDKQAPGMGASFGNAGHM
CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
ATEQVFPIADASIIKRLPGMLMDPKGPLRLDWRYLPKALPWFIRLLSNLRPAPYQASVSG
HHHCCCCCCCHHHHHHCCCCEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LRALNEASLDAWRRLLDTVDGAHLLKQDGSFMVYEQDNSLAALQALQACMATQGVPVESW
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
SGNAIRDVAPQLSDAIRGGLFFPATGHVVDPLALVRHLVTAAKSAGVTFRQDDVVSGHVH
CCCHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCEECEEE
AQGVTLEAAGAGRLHGRQVLVACGAHSAPLTARLTGIRVPLDTERGYHLMLPGEQSRLPL
ECCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCE
AVTSLERRFIMTPMTDGLRLAGTVEFAGLKRPPDMERAWQLHRLSQGLFKTPLDAAAATP
EEEHHCCEEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCC
WMGFRPSLPDSLPVIDSAQDGRVLLAFGHHHLGLTQAAVTAELVAELATSGATEAGTSRQ
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPSVRDRALPELAPYRLDRF
CCCHHHHCCCHHCCHHHCCC
>Mature Secondary Structure 
GSQDQAVHDNADQADVIVVGAGVIGIVSALALSRRGLNVMVVDKQAPGMGASFGNAGHM
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
ATEQVFPIADASIIKRLPGMLMDPKGPLRLDWRYLPKALPWFIRLLSNLRPAPYQASVSG
HHHCCCCCCCHHHHHHCCCCEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LRALNEASLDAWRRLLDTVDGAHLLKQDGSFMVYEQDNSLAALQALQACMATQGVPVESW
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
SGNAIRDVAPQLSDAIRGGLFFPATGHVVDPLALVRHLVTAAKSAGVTFRQDDVVSGHVH
CCCHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCEECEEE
AQGVTLEAAGAGRLHGRQVLVACGAHSAPLTARLTGIRVPLDTERGYHLMLPGEQSRLPL
ECCEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCE
AVTSLERRFIMTPMTDGLRLAGTVEFAGLKRPPDMERAWQLHRLSQGLFKTPLDAAAATP
EEEHHCCEEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCC
WMGFRPSLPDSLPVIDSAQDGRVLLAFGHHHLGLTQAAVTAELVAELATSGATEAGTSRQ
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPSVRDRALPELAPYRLDRF
CCCHHHHCCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA