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The map label for this gene is cmoB

Identifier: 92114666

GI number: 92114666

Start: 2859287

End: 2860288

Strand: Direct

Name: cmoB

Synonym: Csal_2548

Alternate gene names: 92114666

Gene position: 2859287-2860288 (Clockwise)

Preceding gene: 92114665

Following gene: 92114667

Centisome position: 77.35

GC content: 67.17

Gene sequence:

>1002_bases
ATGCCTGATCGCTCTCTGCCCCCTGCCCAGCGGGCCCTGTTCGATGCCCTGCTCGATCACGGCCTGAGCGAATGGGTCGC
CCGCCTGCCCGCGCAACTCGCCGATGGCCTGGACCGCAAGCGCTTCGGCGACCTGCCCGCCTGGGAGAAGGCCGTCGCCA
AGCTGCCCACGCTGCCCGAGGCGCGTGATGTCGCTCTCGACAGCGACAGCGTGCGTGTCGATCTCGCGCTCACCGAGAGC
CAGCAACGTCAGTGCGAGAACCTGCTGCGCAAGTTGATGCCCTGGCGCAAGGGACCCTACACCCTGGGCGGCATCCACAT
CGATACCGAGTGGCGCTCGGACTGGAAATGGCAACGCGTGGCACCGCACCTGTCCCCGCTCGAGGGACGTCGCGTGCTGG
ATGTCGGCGGCGGCAACGGCTATCACGGCTGGCGCATGGTGGGCGCAGGCGCGGCCTTCGTGCTGATCGTCGACCCCTCG
CCGCGTTTCTACTATCAATTCCAGGCCGTGCGCCATTTCGTCGGCGATGCCGATGGCTGGCGCACGCATTTCCTGCCGGT
CGGCATCGAGGCGGTACCGCCGAAGCTGGAAGCGTTCGACACCACCTTTTCGATGGGTGTGCTCTACCATCGGCCCTCTC
CCCTGGAGCACCTGATGCAGCTCCGCGACACCCTGCGCCCGGGGGGCGAGCTCGTCCTCGAGACTCTGGTGGTCGAAGGC
GACGCGAACACGGTCTTCATGCCCGGCGAACGCTATGCCGCCATGCCCAACGTATATTTCCTGCCCTCGTCGAAGGCCCT
AGCGCACTGGCTCGAGCGCTGCGGTTTCGAGGACGTCCGCGTCGTCGACGAGGCCCCGACATCGCTGGCGGAACAGCGCA
GCACCGAGTGGATGACCTTCCACTCGCTGGCCGACTTTCTCGACCCCGAGGATGCGACACTGACGCTCGAAGGCTACCCG
GCGCCTCGACGGGCCGTTCTGGTGGCACGCAAGCCGGAGTGA

Upstream 100 bases:

>100_bases
ACCCTCGACGCGCACCACGAGCGCCTGCACGAGGCCGGCTTCACCCGTGTCAGCACCTGGTTCCAGTATCTCAACTTCGC
CTCGATGGTCGCCTTCAAGG

Downstream 100 bases:

>100_bases
CTTGCCCTTCTTCGTCATGCGAACGATAATATTTATCATTATCATCGTCGAAGGAGACTCCTCATGCTGTCGCTCTTCAA
TACGGCTCTCGAGGGCACCC

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPDRSLPPAQRALFDALLDHGLSEWVARLPAQLADGLDRKRFGDLPAWEKAVAKLPTLPEARDVALDSDSVRVDLALTES
QQRQCENLLRKLMPWRKGPYTLGGIHIDTEWRSDWKWQRVAPHLSPLEGRRVLDVGGGNGYHGWRMVGAGAAFVLIVDPS
PRFYYQFQAVRHFVGDADGWRTHFLPVGIEAVPPKLEAFDTTFSMGVLYHRPSPLEHLMQLRDTLRPGGELVLETLVVEG
DANTVFMPGERYAAMPNVYFLPSSKALAHWLERCGFEDVRVVDEAPTSLAEQRSTEWMTFHSLADFLDPEDATLTLEGYP
APRRAVLVARKPE

Sequences:

>Translated_333_residues
MPDRSLPPAQRALFDALLDHGLSEWVARLPAQLADGLDRKRFGDLPAWEKAVAKLPTLPEARDVALDSDSVRVDLALTES
QQRQCENLLRKLMPWRKGPYTLGGIHIDTEWRSDWKWQRVAPHLSPLEGRRVLDVGGGNGYHGWRMVGAGAAFVLIVDPS
PRFYYQFQAVRHFVGDADGWRTHFLPVGIEAVPPKLEAFDTTFSMGVLYHRPSPLEHLMQLRDTLRPGGELVLETLVVEG
DANTVFMPGERYAAMPNVYFLPSSKALAHWLERCGFEDVRVVDEAPTSLAEQRSTEWMTFHSLADFLDPEDATLTLEGYP
APRRAVLVARKPE
>Mature_332_residues
PDRSLPPAQRALFDALLDHGLSEWVARLPAQLADGLDRKRFGDLPAWEKAVAKLPTLPEARDVALDSDSVRVDLALTESQ
QRQCENLLRKLMPWRKGPYTLGGIHIDTEWRSDWKWQRVAPHLSPLEGRRVLDVGGGNGYHGWRMVGAGAAFVLIVDPSP
RFYYQFQAVRHFVGDADGWRTHFLPVGIEAVPPKLEAFDTTFSMGVLYHRPSPLEHLMQLRDTLRPGGELVLETLVVEGD
ANTVFMPGERYAAMPNVYFLPSSKALAHWLERCGFEDVRVVDEAPTSLAEQRSTEWMTFHSLADFLDPEDATLTLEGYPA
PRRAVLVARKPE

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=320, Percent_Identity=55, Blast_Score=356, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_CHRSD (Q1QUG3)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_574594.1
- ProteinModelPortal:   Q1QUG3
- STRING:   Q1QUG3
- GeneID:   4026129
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_2548
- NMPDR:   fig|290398.4.peg.1908
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- ProtClustDB:   PRK15068
- BioCyc:   CSAL290398:CSAL_2548-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 37499; Mature: 37368

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDRSLPPAQRALFDALLDHGLSEWVARLPAQLADGLDRKRFGDLPAWEKAVAKLPTLPE
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCCCC
ARDVALDSDSVRVDLALTESQQRQCENLLRKLMPWRKGPYTLGGIHIDTEWRSDWKWQRV
CCCEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCHHHH
APHLSPLEGRRVLDVGGGNGYHGWRMVGAGAAFVLIVDPSPRFYYQFQAVRHFVGDADGW
CCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEEEEECCCCCEEHHHHHHHHHHCCCCCC
RTHFLPVGIEAVPPKLEAFDTTFSMGVLYHRPSPLEHLMQLRDTLRPGGELVLETLVVEG
EEEEEEECCCCCCCCHHHHCCHHHCCEEEECCCHHHHHHHHHHHHCCCHHEEEEEEEEEC
DANTVFMPGERYAAMPNVYFLPSSKALAHWLERCGFEDVRVVDEAPTSLAEQRSTEWMTF
CCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEHHHCHHHHHHHHCCCHHHH
HSLADFLDPEDATLTLEGYPAPRRAVLVARKPE
HHHHHHCCCCCCEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
PDRSLPPAQRALFDALLDHGLSEWVARLPAQLADGLDRKRFGDLPAWEKAVAKLPTLPE
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCCCC
ARDVALDSDSVRVDLALTESQQRQCENLLRKLMPWRKGPYTLGGIHIDTEWRSDWKWQRV
CCCEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCHHHH
APHLSPLEGRRVLDVGGGNGYHGWRMVGAGAAFVLIVDPSPRFYYQFQAVRHFVGDADGW
CCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEEEEECCCCCEEHHHHHHHHHHCCCCCC
RTHFLPVGIEAVPPKLEAFDTTFSMGVLYHRPSPLEHLMQLRDTLRPGGELVLETLVVEG
EEEEEEECCCCCCCCHHHHCCHHHCCEEEECCCHHHHHHHHHHHHCCCHHEEEEEEEEEC
DANTVFMPGERYAAMPNVYFLPSSKALAHWLERCGFEDVRVVDEAPTSLAEQRSTEWMTF
CCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEHHHCHHHHHHHHCCCHHHH
HSLADFLDPEDATLTLEGYPAPRRAVLVARKPE
HHHHHHCCCCCCEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA