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The map label for this gene is glxA [H]

Identifier: 92114580

GI number: 92114580

Start: 2769113

End: 2770126

Strand: Direct

Name: glxA [H]

Synonym: Csal_2462

Alternate gene names: 92114580

Gene position: 2769113-2770126 (Clockwise)

Preceding gene: 92114579

Following gene: 92114586

Centisome position: 74.91

GC content: 66.17

Gene sequence:

>1014_bases
GTGATTGACACGCGACGTCCGACGCCCGGGCCGGAGCGCATCGCGATCCTGCTGATGCCGCAGTTTTCCTTTGCCGGTCT
GGGCGCGATTCTGGATCCGCTGTTCATCGTCAACTGGCTGACTCAGGAATCGCGCTTCAAGTGGCAGTTGCTGGGCAGCG
ATGCCACGGTCGCCGCCTCCAACGGCGTCCCCCTGAACGTGGATACCGAGTGGCCGGCACCGGCCGATCTGGACAGCGTG
TTCGTCCTCGCCAGTTTCGAGACCAAGACGTATACCGGCGACAAGCGCATCGCCATGTGGCTGCGCCAGTGTGCGGCGGC
CGGGGTGGCGTTGGGCGGCATCGAGATGGGCAGCGAAGTACTGGCCGCGGCGGGCGTGCTCGACGAGCATCAGGTGGCCG
TGCACTGGGATAATCTGGAAGGCTTTCGCGAGCTTTATCCACGCATCCAGGCCACCAGCGACCTCTATCGCATCGCCGGC
CAGCGGCTGAGCTGCGCCGGTGGCACCGCCGTGCTCGACATGATGTTCGCCTGGCTCACGCCACGTGTGGAGCCGCCCTA
CATGGAGGAATTGCGCAATCACTTGCTGGAACGCCGCCAGCGTCGCGACGACAGCGAACAATTGTCGGCGGCCCCCGAGC
ACCATGTCGAGACGTCGGCGCAGTTGCGCAAGGTGATTCGCACCATGCGCCGCACCCTGGAAACGCCGCTCTCGGCACCG
GCGCTGGCTGCCCTCGTCGGGCTCTCGCCGCGCCAGCTGGAGCGGCGCTTCAAGGCCGAACTCGGTGTCACGCCGATTCG
TTACTATCTCTGGCTGCGCATCAATCGCGCGCATCGACTGCTGCAGCAGACCGACCTGAGCGTGGCAGAGGTCGCCAGTT
GCGCCGGCTTCGGCTCCCTGGAGCATTTCTCACGTGCCTACCGGCGCTTCTTCGGCTGCGCCCCCAGCGACGACCGCCTG
CAATCGCGAGACGCCCCGGTGGTCCCGGTGCGACTCTTCCCGATCAAGCGCTGA

Upstream 100 bases:

>100_bases
AAGACCGCCCGGCAATGGGAGGATTATCTGGCGCAAGGCTCGGCGCACATGCACCTTGCCGCCTTGATGCGCCTGCTCGA
TCGCGACGCCCCCGATTACC

Downstream 100 bases:

>100_bases
GCGCCCTCGATCGTCACGACAAGTCGCTATCTTCCGGGGCCGTCCCGGAAAGCACGTCGGGAATGGTCTGCCGTACATAG
CGGCCCGGCGCGGGCTCGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIDTRRPTPGPERIAILLMPQFSFAGLGAILDPLFIVNWLTQESRFKWQLLGSDATVAASNGVPLNVDTEWPAPADLDSV
FVLASFETKTYTGDKRIAMWLRQCAAAGVALGGIEMGSEVLAAAGVLDEHQVAVHWDNLEGFRELYPRIQATSDLYRIAG
QRLSCAGGTAVLDMMFAWLTPRVEPPYMEELRNHLLERRQRRDDSEQLSAAPEHHVETSAQLRKVIRTMRRTLETPLSAP
ALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRLLQQTDLSVAEVASCAGFGSLEHFSRAYRRFFGCAPSDDRL
QSRDAPVVPVRLFPIKR

Sequences:

>Translated_337_residues
MIDTRRPTPGPERIAILLMPQFSFAGLGAILDPLFIVNWLTQESRFKWQLLGSDATVAASNGVPLNVDTEWPAPADLDSV
FVLASFETKTYTGDKRIAMWLRQCAAAGVALGGIEMGSEVLAAAGVLDEHQVAVHWDNLEGFRELYPRIQATSDLYRIAG
QRLSCAGGTAVLDMMFAWLTPRVEPPYMEELRNHLLERRQRRDDSEQLSAAPEHHVETSAQLRKVIRTMRRTLETPLSAP
ALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRLLQQTDLSVAEVASCAGFGSLEHFSRAYRRFFGCAPSDDRL
QSRDAPVVPVRLFPIKR
>Mature_337_residues
MIDTRRPTPGPERIAILLMPQFSFAGLGAILDPLFIVNWLTQESRFKWQLLGSDATVAASNGVPLNVDTEWPAPADLDSV
FVLASFETKTYTGDKRIAMWLRQCAAAGVALGGIEMGSEVLAAAGVLDEHQVAVHWDNLEGFRELYPRIQATSDLYRIAG
QRLSCAGGTAVLDMMFAWLTPRVEPPYMEELRNHLLERRQRRDDSEQLSAAPEHHVETSAQLRKVIRTMRRTLETPLSAP
ALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRLLQQTDLSVAEVASCAGFGSLEHFSRAYRRFFGCAPSDDRL
QSRDAPVVPVRLFPIKR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI226510985, Length=96, Percent_Identity=39.5833333333333, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37806; Mature: 37806

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTRRPTPGPERIAILLMPQFSFAGLGAILDPLFIVNWLTQESRFKWQLLGSDATVAAS
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEC
NGVPLNVDTEWPAPADLDSVFVLASFETKTYTGDKRIAMWLRQCAAAGVALGGIEMGSEV
CCEEEECCCCCCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHHHHHHEECCHHHHHHH
LAAAGVLDEHQVAVHWDNLEGFRELYPRIQATSDLYRIAGQRLSCAGGTAVLDMMFAWLT
HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
PRVEPPYMEELRNHLLERRQRRDDSEQLSAAPEHHVETSAQLRKVIRTMRRTLETPLSAP
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRLLQQTDLSVAEVASCAGFGSL
HHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHEEEHHHHHHHHHHCCCHHHHHHHCCCCCH
EHFSRAYRRFFGCAPSDDRLQSRDAPVVPVRLFPIKR
HHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCC
>Mature Secondary Structure
MIDTRRPTPGPERIAILLMPQFSFAGLGAILDPLFIVNWLTQESRFKWQLLGSDATVAAS
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEC
NGVPLNVDTEWPAPADLDSVFVLASFETKTYTGDKRIAMWLRQCAAAGVALGGIEMGSEV
CCEEEECCCCCCCCCCCCCEEEEEEECCCEECCCHHHHHHHHHHHHHHHEECCHHHHHHH
LAAAGVLDEHQVAVHWDNLEGFRELYPRIQATSDLYRIAGQRLSCAGGTAVLDMMFAWLT
HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
PRVEPPYMEELRNHLLERRQRRDDSEQLSAAPEHHVETSAQLRKVIRTMRRTLETPLSAP
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ALAALVGLSPRQLERRFKAELGVTPIRYYLWLRINRAHRLLQQTDLSVAEVASCAGFGSL
HHHHHHCCCHHHHHHHHHHHCCCCCEEEHHHEEEHHHHHHHHHHCCCHHHHHHHCCCCCH
EHFSRAYRRFFGCAPSDDRLQSRDAPVVPVRLFPIKR
HHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]