| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is murI [H]
Identifier: 92113464
GI number: 92113464
Start: 1530476
End: 1531279
Strand: Direct
Name: murI [H]
Synonym: Csal_1338
Alternate gene names: 92113464
Gene position: 1530476-1531279 (Clockwise)
Preceding gene: 92113463
Following gene: 92113465
Centisome position: 41.4
GC content: 72.76
Gene sequence:
>804_bases ATGACGGCGCCGATCCTGATCTTCGACTCCGGCGTCGGCGGGCTGTCGGTGGTGGGGGCCTTGCGGGCGCGCCTGCCCGG CGCGGCGCTGGCCTATGTCTGCGACAATGCGGCCTTGCCGTACGGGACCAAGCCCGATGCCTGGCTGGTCGCGCGCATCG TGGCGGCGTGCCGCGCGGCGGTGGCGGCCAGCGGCGCGTGCGCGCTGGTGGTGGCCTGCAACACGGCCAGCACCTTGGCG CTACAGGCGCTGCGCGAGAGCCTGACGGTCCCGGTGATCGGCACCGTGCCGGCGATCAAGCCTGCCGCCCAGCTCTTGCG CAGTGGCGTGTTCGGGTTGCTGGCGACCTCGGCGACGGTATCGCGTCCTTATACGCAGCGCCTGATCGGCGAGTTCGCCA CGCATTGCACGGTCATCCGGCTGGCCGCCGATCCGCTGGTGGCGCAGGCCGAGCGGGTGCTGGCCGGTCGTGCGCCCGAC GAGGCGGTCATCGCCGCGAGCCTGGCGCCCTTATGGGAAGCGCCGGACCTCGATACCGTGGTGCTTGGGTGCACGCATTT CCCGCTGCTGCGCGAGACGCTGGCGGCCCAGGCACCGCGTGACGTGCGCTGGATAGACTCCGGCGACGCCATCGCGCGGC GTGTGGCGCAGGTGGTGACGCCCGCTCCGTGCAACATGCCCGGCGCGGGCGAGAGCTGGGCCAGTGCGCCGCACCGGCCG GGGCTGGCGCGGGCCCTGGCGGAATACGGTTTCAGCGCGCCGCGCGCCCTGTCGCTGCCCGACGTTTTCTCGGACAGAGC TTGA
Upstream 100 bases:
>100_bases CGATCAGCGTGCACCTGCTGTATGCCGAGCGTGAATTCATCCCCGCACGTTTGCGGGCGCTGGTGGACACCTTGCTGGCA CACTTTGCGGAGGCTCGCGC
Downstream 100 bases:
>100_bases TCTGCTGATATTCATGAGGCGGTATCGCCGTGGGCGAGACCGCGAGTTTTCGTTGAAAGGAGTTTTCGTGGCCGTACCCG TCGTCGAACCCGAACGTTAC
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAAVAASGACALVVACNTASTLA LQALRESLTVPVIGTVPAIKPAAQLLRSGVFGLLATSATVSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPD EAVIAASLAPLWEAPDLDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGESWASAPHRP GLARALAEYGFSAPRALSLPDVFSDRA
Sequences:
>Translated_267_residues MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAAVAASGACALVVACNTASTLA LQALRESLTVPVIGTVPAIKPAAQLLRSGVFGLLATSATVSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPD EAVIAASLAPLWEAPDLDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGESWASAPHRP GLARALAEYGFSAPRALSLPDVFSDRA >Mature_266_residues TAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAAVAASGACALVVACNTASTLAL QALRESLTVPVIGTVPAIKPAAQLLRSGVFGLLATSATVSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDE AVIAASLAPLWEAPDLDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGESWASAPHRPG LARALAEYGFSAPRALSLPDVFSDRA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=262, Percent_Identity=43.8931297709924, Blast_Score=177, Evalue=7e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 27516; Mature: 27385
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA CCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH VAASGACALVVACNTASTLALQALRESLTVPVIGTVPAIKPAAQLLRSGVFGLLATSATV HHCCCCEEEEEEECCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH SRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPLWEAPDLDTV CCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEE VLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGESWASAPHRP EECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC GLARALAEYGFSAPRALSLPDVFSDRA HHHHHHHHHCCCCCCCCCCCHHHCCCC >Mature Secondary Structure TAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA CCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH VAASGACALVVACNTASTLALQALRESLTVPVIGTVPAIKPAAQLLRSGVFGLLATSATV HHCCCCEEEEEEECCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH SRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPLWEAPDLDTV CCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEE VLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGESWASAPHRP EECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCC GLARALAEYGFSAPRALSLPDVFSDRA HHHHHHHHHCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA