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The map label for this gene is cvfB [H]

Identifier: 92112191

GI number: 92112191

Start: 75861

End: 76766

Strand: Direct

Name: cvfB [H]

Synonym: Csal_0056

Alternate gene names: 92112191

Gene position: 75861-76766 (Clockwise)

Preceding gene: 92112185

Following gene: 92112192

Centisome position: 2.05

GC content: 65.78

Gene sequence:

>906_bases
ATGAACGCCGAAAGGCAGCCCTCATGCTGTAAAGTTCGCCTTCTTCTATGCGATAAATCTTATCCTAGTCATCAGTCGCC
GATTTATACGCCAACCCCCCCGCCATGGCCTTTGCTCGCGTTGCCGGGCGGCGTCATAATGAGGACATATCTCTCGTCAG
TGGCCGCCATCATGTCCCGTTCCCCAGATCCCGCCCCGCGTTCCTCCGCTCCCGGCCGGCGTGCGTCGAGTTCGACGCGC
CCACCCCTGGCACGTATCGGTGAGGTGGCGTATCTCAAGGTGGTGGCGGTCAATACCACCGGGGCCTTTCTCGACTGGGG
CCAGCCGAAGGACGTGTTGCTGCCGTTCGCCGAGCAGCGCTTCCGGCCGGAGGTGGGCAAGCGCGTGCTGGTGATGCTGT
ACGAAGACGCCCAGGGACGGCCGGTGGCGTCCATGCGGCTCGATCGATTCCTGGCCGATGAGGCCACGGACCTCAAGGCC
GGCGATCAGGTGGCGCTGGTGGTCGCCGAGCGTACCGACCTGGGCTTCAAGGCGGTGGTCGATCACCGCTATTGGGGGCT
CCTGTACGCGGATGACATCGTCCATCCGCCGCGGCGCGGTCAGCGGCTGACGGGGTACATCAAGCGCGTACGCGAGGATG
GGCGTCTCGACCTTGCCATGCTGCCGCCCGGCGAGGCGGGGCTCGATGTGGTCGGCGACAAGGTGCTGGCACTGCTGCGC
TGTCACGGCGGCTTCGTGGCGCTGGGCGACAAGACCCCCGCCGCCGAGATCAAGGCGCGGGTGGGCGTGAGCAAGAGCGC
CTTCAAGCAGGCCGTGGGTCGGCTCTACAAGAAACGGCTGATCACCATCGAGGCGGAAGGCATCCGCCTGACGCGCGAGG
CGATCGACGACGCTTCGTCCGACTGA

Upstream 100 bases:

>100_bases
TCGCAGTTCATTAATAAGGATGGTTTTTGTAAAGCTAGATTGCTGTATTGTAAAAATAATTTCTTTGTCTGAGTAATCTG
TAACATTTCTGGGCAGGGCC

Downstream 100 bases:

>100_bases
GGCGTCGCCGGCGTCTTGGTCTTCCGTTGACGGCTGCGGCATACTGCGCGCATCCATTCCTTACCCGGAAGACCGATCAT
GAGCGAGCGCGCCTTGAAGC

Product: RNA binding S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNAERQPSCCKVRLLLCDKSYPSHQSPIYTPTPPPWPLLALPGGVIMRTYLSSVAAIMSRSPDPAPRSSAPGRRASSSTR
PPLARIGEVAYLKVVAVNTTGAFLDWGQPKDVLLPFAEQRFRPEVGKRVLVMLYEDAQGRPVASMRLDRFLADEATDLKA
GDQVALVVAERTDLGFKAVVDHRYWGLLYADDIVHPPRRGQRLTGYIKRVREDGRLDLAMLPPGEAGLDVVGDKVLALLR
CHGGFVALGDKTPAAEIKARVGVSKSAFKQAVGRLYKKRLITIEAEGIRLTREAIDDASSD

Sequences:

>Translated_301_residues
MNAERQPSCCKVRLLLCDKSYPSHQSPIYTPTPPPWPLLALPGGVIMRTYLSSVAAIMSRSPDPAPRSSAPGRRASSSTR
PPLARIGEVAYLKVVAVNTTGAFLDWGQPKDVLLPFAEQRFRPEVGKRVLVMLYEDAQGRPVASMRLDRFLADEATDLKA
GDQVALVVAERTDLGFKAVVDHRYWGLLYADDIVHPPRRGQRLTGYIKRVREDGRLDLAMLPPGEAGLDVVGDKVLALLR
CHGGFVALGDKTPAAEIKARVGVSKSAFKQAVGRLYKKRLITIEAEGIRLTREAIDDASSD
>Mature_301_residues
MNAERQPSCCKVRLLLCDKSYPSHQSPIYTPTPPPWPLLALPGGVIMRTYLSSVAAIMSRSPDPAPRSSAPGRRASSSTR
PPLARIGEVAYLKVVAVNTTGAFLDWGQPKDVLLPFAEQRFRPEVGKRVLVMLYEDAQGRPVASMRLDRFLADEATDLKA
GDQVALVVAERTDLGFKAVVDHRYWGLLYADDIVHPPRRGQRLTGYIKRVREDGRLDLAMLPPGEAGLDVVGDKVLALLR
CHGGFVALGDKTPAAEIKARVGVSKSAFKQAVGRLYKKRLITIEAEGIRLTREAIDDASSD

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CvfB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022967
- InterPro:   IPR011991
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32951; Mature: 32951

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAERQPSCCKVRLLLCDKSYPSHQSPIYTPTPPPWPLLALPGGVIMRTYLSSVAAIMSR
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHC
SPDPAPRSSAPGRRASSSTRPPLARIGEVAYLKVVAVNTTGAFLDWGQPKDVLLPFAEQR
CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCEEECCCCHHHCCCCHHHH
FRPEVGKRVLVMLYEDAQGRPVASMRLDRFLADEATDLKAGDQVALVVAERTDLGFKAVV
CCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHEEC
DHRYWGLLYADDIVHPPRRGQRLTGYIKRVREDGRLDLAMLPPGEAGLDVVGDKVLALLR
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH
CHGGFVALGDKTPAAEIKARVGVSKSAFKQAVGRLYKKRLITIEAEGIRLTREAIDDASS
HCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCEEEEHHHHCCCCC
D
C
>Mature Secondary Structure
MNAERQPSCCKVRLLLCDKSYPSHQSPIYTPTPPPWPLLALPGGVIMRTYLSSVAAIMSR
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHC
SPDPAPRSSAPGRRASSSTRPPLARIGEVAYLKVVAVNTTGAFLDWGQPKDVLLPFAEQR
CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCEEECCCCHHHCCCCHHHH
FRPEVGKRVLVMLYEDAQGRPVASMRLDRFLADEATDLKAGDQVALVVAERTDLGFKAVV
CCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHEEC
DHRYWGLLYADDIVHPPRRGQRLTGYIKRVREDGRLDLAMLPPGEAGLDVVGDKVLALLR
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH
CHGGFVALGDKTPAAEIKARVGVSKSAFKQAVGRLYKKRLITIEAEGIRLTREAIDDASS
HCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCEEEEHHHHCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA