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The map label for this gene is rsmE [H]

Identifier: 92112185

GI number: 92112185

Start: 57546

End: 58274

Strand: Direct

Name: rsmE [H]

Synonym: Csal_0049

Alternate gene names: 92112185

Gene position: 57546-58274 (Clockwise)

Preceding gene: 92112184

Following gene: 92112191

Centisome position: 1.56

GC content: 69.96

Gene sequence:

>729_bases
ATGGCCGGACCGCGCATTCATGTGGCGGCCACGCTGGTCGCCGCAGCGGAGCTCACCCTGCCCGAAGGTGCCTCGCGCCA
TGTGGCGGGCGCGCTACGCCTGCGCGAGGGCGCGGCGCTGCGCCTGTTCGATGGCGAGGGCCATGAAGCCGATGCCGAGA
TCGTCGCCGTGGGGCGCCGCGAGGTGCGCGTGCGGATCACTGCCGTGACCGAGGGAGGTGCCGAATCGCCGCTGGCGGTG
CACCTGGGCCAGGCGATCTCCAAGGGCGATCGCATGGACTACGCGATCCAGAAGGCCACCGAACTCGGCGTGGCGGCCAT
CACTCCGCTCTACACCGAGCACGGCGACGTGCGCCTCAAGGGCGAGCGCGAAGCCAAGAAACTCGCTCACTGGCAAGCCG
TCGCGGTCAGCGCCTGCGAGCAATGCGGGCGTAGCCGCGTACCCACCGTGCATCCTCCGCAAACGCTCGACGCCTGGCTG
GCAAGGCGTGACGAAACGCTGCGCCTCGTCCTGCACCCTTCCACCGACACTACATGGCGACATGCCAGCGACGTCGCCCG
CGTCGCGCTGCTCGTCGGCCCCGAAGGCGGTCTATCGCCCAACGAAATCGACACCGCCCGCGCCGCCGACTTCGCCGCCC
TGACCCTCGGCCCGCGCATCCTGCGCACCGAAACCGCCCCCGTCGTTGCCCTCACGCTGCTCCAGTATCACTTCGGCGAT
TTGGGGTAG

Upstream 100 bases:

>100_bases
CAGCTTCCCGCCACTGATGCTGTCGCCGGTCAATTTCGAGGGCATGTACGCGCAGAAGAAGAAGCGCGAGAGCGAAGCCG
CCGAGAACGCGCACTAAGCG

Downstream 100 bases:

>100_bases
AGCGCTCGCGACTCAATTGGCTGTCACCTTCCACGGAATCGGTGGCGGCATGATCCGTTCCCCATCGAATTCGGGCACGT
CGCCGAAGCGGTCGCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAGPRIHVAATLVAAAELTLPEGASRHVAGALRLREGAALRLFDGEGHEADAEIVAVGRREVRVRITAVTEGGAESPLAV
HLGQAISKGDRMDYAIQKATELGVAAITPLYTEHGDVRLKGEREAKKLAHWQAVAVSACEQCGRSRVPTVHPPQTLDAWL
ARRDETLRLVLHPSTDTTWRHASDVARVALLVGPEGGLSPNEIDTARAADFAALTLGPRILRTETAPVVALTLLQYHFGD
LG

Sequences:

>Translated_242_residues
MAGPRIHVAATLVAAAELTLPEGASRHVAGALRLREGAALRLFDGEGHEADAEIVAVGRREVRVRITAVTEGGAESPLAV
HLGQAISKGDRMDYAIQKATELGVAAITPLYTEHGDVRLKGEREAKKLAHWQAVAVSACEQCGRSRVPTVHPPQTLDAWL
ARRDETLRLVLHPSTDTTWRHASDVARVALLVGPEGGLSPNEIDTARAADFAALTLGPRILRTETAPVVALTLLQYHFGD
LG
>Mature_241_residues
AGPRIHVAATLVAAAELTLPEGASRHVAGALRLREGAALRLFDGEGHEADAEIVAVGRREVRVRITAVTEGGAESPLAVH
LGQAISKGDRMDYAIQKATELGVAAITPLYTEHGDVRLKGEREAKKLAHWQAVAVSACEQCGRSRVPTVHPPQTLDAWLA
RRDETLRLVLHPSTDTTWRHASDVARVALLVGPEGGLSPNEIDTARAADFAALTLGPRILRTETAPVVALTLLQYHFGDL
G

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=243, Percent_Identity=46.0905349794239, Blast_Score=223, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 25821; Mature: 25689

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPRIHVAATLVAAAELTLPEGASRHVAGALRLREGAALRLFDGEGHEADAEIVAVGRR
CCCCEEEHHHHHHHHHHEECCCCCCHHHHHHEEECCCCEEEEECCCCCCCCCEEEEECCE
EVRVRITAVTEGGAESPLAVHLGQAISKGDRMDYAIQKATELGVAAITPLYTEHGDVRLK
EEEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCEEECCCCEEEE
GEREAKKLAHWQAVAVSACEQCGRSRVPTVHPPQTLDAWLARRDETLRLVLHPSTDTTWR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHH
HASDVARVALLVGPEGGLSPNEIDTARAADFAALTLGPRILRTETAPVVALTLLQYHFGD
HHHHHEEEEEEECCCCCCCCCCCCHHHHCCEEEEECCCEEEECCCCHHHHHHHHHHHCCC
LG
CC
>Mature Secondary Structure 
AGPRIHVAATLVAAAELTLPEGASRHVAGALRLREGAALRLFDGEGHEADAEIVAVGRR
CCCEEEHHHHHHHHHHEECCCCCCHHHHHHEEECCCCEEEEECCCCCCCCCEEEEECCE
EVRVRITAVTEGGAESPLAVHLGQAISKGDRMDYAIQKATELGVAAITPLYTEHGDVRLK
EEEEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCEEECCCCEEEE
GEREAKKLAHWQAVAVSACEQCGRSRVPTVHPPQTLDAWLARRDETLRLVLHPSTDTTWR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHH
HASDVARVALLVGPEGGLSPNEIDTARAADFAALTLGPRILRTETAPVVALTLLQYHFGD
HHHHHEEEEEEECCCCCCCCCCCCHHHHCCEEEEECCCEEEECCCCHHHHHHHHHHHCCC
LG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8332061 [H]