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The map label for this gene is 92109698

Identifier: 92109698

GI number: 92109698

Start: 32241

End: 32627

Strand: Reverse

Name: 92109698

Synonym: Nham_4577

Alternate gene names: NA

Gene position: 32627-32241 (Counterclockwise)

Preceding gene: 92109699

Following gene: 92109697

Centisome position: 26.87

GC content: 64.34

Gene sequence:

>387_bases
ATGGTGATCGATACGTCCCCGATTGTCGCGATCTTCTTCAATGAGCCGGACGCTGCGCGCTTTCGTGAGCGCATCGCCGA
CGATCCGGTCCGCCTGATCTCGGCGGCAACCGTCCTCGAAGCGGCCATGGTCATCGAGGCCCGTTTGGGCGAGGCGGGAG
GGACAGAACTCGATCTCTGGCTGCATAAGGCGGACGTCGAGATCGTTCCCGTGACTGCGGAGCACGCCGACCAGGCCCGG
CGCGCCTGGCGTCGCTACGGCAAAGGCCGCCACCCGGCCGGATTGAATTTCGGCGACTGCTTTTCCTATGCCCTGGCCGC
CCTCAGCGGTGAACCCCTGCTGTACAAGGGCAACGACTTTTCGCAGACCGACATCAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
ATATGGAGGCGATGCAGCGTCGACTGAATGCGCTTCCGATTCTCGATCCCCGCAGCCCCGACGACATCATCGGCTACGAC
GAAAATGGCGTTCCAAACTG

Downstream 100 bases:

>100_bases
CGATGAACAATCTCTCTCCCGGCAGCGACAGCCTTCTCGTCCCTTCGCAGGCCGTGCGAGAGCCGGGCGACGCTCCCTCC
CCTCCTCTACCCGCCCACCT

Product: PilT protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MVIDTSPIVAIFFNEPDAARFRERIADDPVRLISAATVLEAAMVIEARLGEAGGTELDLWLHKADVEIVPVTAEHADQAR
RAWRRYGKGRHPAGLNFGDCFSYALAALSGEPLLYKGNDFSQTDIKAA

Sequences:

>Translated_128_residues
MVIDTSPIVAIFFNEPDAARFRERIADDPVRLISAATVLEAAMVIEARLGEAGGTELDLWLHKADVEIVPVTAEHADQAR
RAWRRYGKGRHPAGLNFGDCFSYALAALSGEPLLYKGNDFSQTDIKAA
>Mature_128_residues
MVIDTSPIVAIFFNEPDAARFRERIADDPVRLISAATVLEAAMVIEARLGEAGGTELDLWLHKADVEIVPVTAEHADQAR
RAWRRYGKGRHPAGLNFGDCFSYALAALSGEPLLYKGNDFSQTDIKAA

Specific function: Unknown

COG id: COG3742

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0110 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 13999; Mature: 13999

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDTSPIVAIFFNEPDAARFRERIADDPVRLISAATVLEAAMVIEARLGEAGGTELDLW
CEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LHKADVEIVPVTAEHADQARRAWRRYGKGRHPAGLNFGDCFSYALAALSGEPLLYKGNDF
EEECCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
SQTDIKAA
CCCCCCCC
>Mature Secondary Structure
MVIDTSPIVAIFFNEPDAARFRERIADDPVRLISAATVLEAAMVIEARLGEAGGTELDLW
CEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LHKADVEIVPVTAEHADQARRAWRRYGKGRHPAGLNFGDCFSYALAALSGEPLLYKGNDF
EEECCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
SQTDIKAA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]