Definition Nitrobacter hamburgensis X14 plasmid 3, complete sequence.
Accession NC_007961
Length 121,408

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The map label for this gene is 92109699

Identifier: 92109699

GI number: 92109699

Start: 32627

End: 32881

Strand: Reverse

Name: 92109699

Synonym: Nham_4578

Alternate gene names: NA

Gene position: 32881-32627 (Counterclockwise)

Preceding gene: 92109708

Following gene: 92109698

Centisome position: 27.08

GC content: 63.53

Gene sequence:

>255_bases
ATGGCGCTAAGCATCAAGGATCCCGAGACCGAAAAGCTCGCGCGCGCACTGGCCCAGCGCACCGGGGAGACCATCACCGT
CGCAACCCGCCGCGCGATCGAGGAGCGGCTGAAGCGAACGGAATCGCAGGCGCGCAAGGCCGCCCTTCTGGAGGATATGG
AGGCGATGCAGCGTCGACTGAATGCGCTTCCGATTCTCGATCCCCGCAGCCCCGACGACATCATCGGCTACGACGAAAAT
GGCGTTCCAAACTGA

Upstream 100 bases:

>100_bases
GCGAAGGAACCTCGCCCGCCGTCAAAAATGTGCTGGGCGCTTGGGTCGAGACGCCTTATATAGGTAGAATATTGAAGAGT
AGGAACCAAGGAACCCTGCA

Downstream 100 bases:

>100_bases
TGGTGATCGATACGTCCCCGATTGTCGCGATCTTCTTCAATGAGCCGGACGCTGCGCGCTTTCGTGAGCGCATCGCCGAC
GATCCGGTCCGCCTGATCTC

Product: Rv0623-like transcription factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDEN
GVPN

Sequences:

>Translated_84_residues
MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDEN
GVPN
>Mature_83_residues
ALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDENG
VPN

Specific function: Unknown

COG id: COG4423

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9431; Mature: 9300

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRL
CCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NALPILDPRSPDDIIGYDENGVPN
HCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRL
CCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NALPILDPRSPDDIIGYDENGVPN
HCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA