| Definition | Nitrobacter hamburgensis X14 plasmid 3, complete sequence. |
|---|---|
| Accession | NC_007961 |
| Length | 121,408 |
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The map label for this gene is 92109699
Identifier: 92109699
GI number: 92109699
Start: 32627
End: 32881
Strand: Reverse
Name: 92109699
Synonym: Nham_4578
Alternate gene names: NA
Gene position: 32881-32627 (Counterclockwise)
Preceding gene: 92109708
Following gene: 92109698
Centisome position: 27.08
GC content: 63.53
Gene sequence:
>255_bases ATGGCGCTAAGCATCAAGGATCCCGAGACCGAAAAGCTCGCGCGCGCACTGGCCCAGCGCACCGGGGAGACCATCACCGT CGCAACCCGCCGCGCGATCGAGGAGCGGCTGAAGCGAACGGAATCGCAGGCGCGCAAGGCCGCCCTTCTGGAGGATATGG AGGCGATGCAGCGTCGACTGAATGCGCTTCCGATTCTCGATCCCCGCAGCCCCGACGACATCATCGGCTACGACGAAAAT GGCGTTCCAAACTGA
Upstream 100 bases:
>100_bases GCGAAGGAACCTCGCCCGCCGTCAAAAATGTGCTGGGCGCTTGGGTCGAGACGCCTTATATAGGTAGAATATTGAAGAGT AGGAACCAAGGAACCCTGCA
Downstream 100 bases:
>100_bases TGGTGATCGATACGTCCCCGATTGTCGCGATCTTCTTCAATGAGCCGGACGCTGCGCGCTTTCGTGAGCGCATCGCCGAC GATCCGGTCCGCCTGATCTC
Product: Rv0623-like transcription factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDEN GVPN
Sequences:
>Translated_84_residues MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDEN GVPN >Mature_83_residues ALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRLNALPILDPRSPDDIIGYDENG VPN
Specific function: Unknown
COG id: COG4423
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9431; Mature: 9300
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRL CCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALPILDPRSPDDIIGYDENGVPN HCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALSIKDPETEKLARALAQRTGETITVATRRAIEERLKRTESQARKAALLEDMEAMQRRL CCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALPILDPRSPDDIIGYDENGVPN HCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA