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The map label for this gene is trbG [H]

Identifier: 92109682

GI number: 92109682

Start: 17755

End: 18594

Strand: Reverse

Name: trbG [H]

Synonym: Nham_4561

Alternate gene names: 92109682

Gene position: 18594-17755 (Counterclockwise)

Preceding gene: 92109683

Following gene: 92109681

Centisome position: 15.32

GC content: 62.98

Gene sequence:

>840_bases
ATGCACCCATACACCATCAGACTCAAGACAGGGCTTTTCATCGCTGCCGCTGCCTTCGGCTTGCTGCTCGCCGATGTCAG
CGCCCACGCGCAGGTGATGAATGCCAAGGAGCGGAAAGGCACCCACATCTCGAGCCAGTGGCGCGGATCGACCGGGCTCG
TGACGCGCGGAGCCGACGGCAAGGTGATTTTCCTCTTCGGAGAGGTGCAGCCTTCCGTGGTCTGCTCGCCACTTGAGGTC
TGCGATATCGAACTCCAGGCGGGTGAGGTCGTGCGCGATGTGCTGGTCGGCGACACGGTGCGCTGGAAGGTCGAGCCGGC
GACGTCGGGCGCGGTCGGCGGCCAAGCTATCCACCTGATCGTCAAGCCGTCGGAGCCCGGGCTCGTCACCTCGATGGTGG
TGACCACCTCGCGACGGACCTACCACATCCAGCTCAAGTCGAACGCAATACAATACATGGCGCGCGTCGGCTTCGAATAT
CCCGAGGACGTCAGCAGCAAGTTGGCCAACATTAACGCGCGTCTTGGCACTGAGACGATCCCCGGCGCCGGCGTCCCGGC
CGAGCAGCTGAACTTCGCCTATAGCGTCAGTGGCAGCGCCTCCTGGCGGCCGACCCGCGTCTACAGCGACGGCCTCAAGA
CCTACATCCAGTTTCCGTCGTCGCTCGCCGGACAGGATGCGCCGGTGCTTTTCGTCGAATCGGGCGGCAAGGACCGGATC
GTCAACTATCGGCTGAAGGGTGACATGATGGTGGTCGATTATCAGATCGACACCGCCATTCTGGTCTCCGGCGTGAGCTT
TTGGCATCAGGAGAAGGTGACGATCCGGAGGGGAGGCTGA

Upstream 100 bases:

>100_bases
CTCCACCCCAGGACGAGCAAACCATCCGGCTCAATCCGATCGGCCTCTACCTGCGTGATTTCGACTGGACGGCGCAACTA
TGAAAGGGGCGGGGACACTG

Downstream 100 bases:

>100_bases
CCATGCGCGTGGACTCTTTGACCCGCCGAGCCATCCTTCTTTGCATCGTCGCCCTGTCGCTCGCGGGCTGCGCGTCATTC
GGAACCGGCGGCCTGGTGGC

Product: conjugal transfer protein TrbG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MHPYTIRLKTGLFIAAAAFGLLLADVSAHAQVMNAKERKGTHISSQWRGSTGLVTRGADGKVIFLFGEVQPSVVCSPLEV
CDIELQAGEVVRDVLVGDTVRWKVEPATSGAVGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSNAIQYMARVGFEY
PEDVSSKLANINARLGTETIPGAGVPAEQLNFAYSVSGSASWRPTRVYSDGLKTYIQFPSSLAGQDAPVLFVESGGKDRI
VNYRLKGDMMVVDYQIDTAILVSGVSFWHQEKVTIRRGG

Sequences:

>Translated_279_residues
MHPYTIRLKTGLFIAAAAFGLLLADVSAHAQVMNAKERKGTHISSQWRGSTGLVTRGADGKVIFLFGEVQPSVVCSPLEV
CDIELQAGEVVRDVLVGDTVRWKVEPATSGAVGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSNAIQYMARVGFEY
PEDVSSKLANINARLGTETIPGAGVPAEQLNFAYSVSGSASWRPTRVYSDGLKTYIQFPSSLAGQDAPVLFVESGGKDRI
VNYRLKGDMMVVDYQIDTAILVSGVSFWHQEKVTIRRGG
>Mature_279_residues
MHPYTIRLKTGLFIAAAAFGLLLADVSAHAQVMNAKERKGTHISSQWRGSTGLVTRGADGKVIFLFGEVQPSVVCSPLEV
CDIELQAGEVVRDVLVGDTVRWKVEPATSGAVGGQAIHLIVKPSEPGLVTSMVVTTSRRTYHIQLKSNAIQYMARVGFEY
PEDVSSKLANINARLGTETIPGAGVPAEQLNFAYSVSGSASWRPTRVYSDGLKTYIQFPSSLAGQDAPVLFVESGGKDRI
VNYRLKGDMMVVDYQIDTAILVSGVSFWHQEKVTIRRGG

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 30184; Mature: 30184

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPYTIRLKTGLFIAAAAFGLLLADVSAHAQVMNAKERKGTHISSQWRGSTGLVTRGADG
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEECCCC
KVIFLFGEVQPSVVCSPLEVCDIELQAGEVVRDVLVGDTVRWKVEPATSGAVGGQAIHLI
EEEEEEECCCCCEEECCHHEEEEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEE
VKPSEPGLVTSMVVTTSRRTYHIQLKSNAIQYMARVGFEYPEDVSSKLANINARLGTETI
EECCCCCEEEEEEEEECCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PGAGVPAEQLNFAYSVSGSASWRPTRVYSDGLKTYIQFPSSLAGQDAPVLFVESGGKDRI
CCCCCCHHHCEEEEEECCCCCCCCCEEHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCEE
VNYRLKGDMMVVDYQIDTAILVSGVSFWHQEKVTIRRGG
EEEEEECCEEEEEEECCCEEEEHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MHPYTIRLKTGLFIAAAAFGLLLADVSAHAQVMNAKERKGTHISSQWRGSTGLVTRGADG
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEECCCC
KVIFLFGEVQPSVVCSPLEVCDIELQAGEVVRDVLVGDTVRWKVEPATSGAVGGQAIHLI
EEEEEEECCCCCEEECCHHEEEEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEE
VKPSEPGLVTSMVVTTSRRTYHIQLKSNAIQYMARVGFEYPEDVSSKLANINARLGTETI
EECCCCCEEEEEEEEECCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PGAGVPAEQLNFAYSVSGSASWRPTRVYSDGLKTYIQFPSSLAGQDAPVLFVESGGKDRI
CCCCCCHHHCEEEEEECCCCCCCCCEEHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCEE
VNYRLKGDMMVVDYQIDTAILVSGVSFWHQEKVTIRRGG
EEEEEECCEEEEEEECCCEEEEHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]