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The map label for this gene is trbI [H]

Identifier: 92109680

GI number: 92109680

Start: 15988

End: 17289

Strand: Reverse

Name: trbI [H]

Synonym: Nham_4559

Alternate gene names: 92109680

Gene position: 17289-15988 (Counterclockwise)

Preceding gene: 92109681

Following gene: 92109679

Centisome position: 14.24

GC content: 63.13

Gene sequence:

>1302_bases
ATGGCGCAATCCCTGAAGCTCGGCGGCACACCGGAGGGCGAGGAGGCGAGAGGCATCCGACGCCTCAACCAGCTGCCGAT
CATCGTCGCCATCGTGCTGGTGATCGTGTTCTTCGCCGTGATCTTCTACGGCCTCACCTCGCGCGGGCTTTATGTCCATC
GAGCGGCCGGGATCGACACGGCTTCGTCCAGTCCAGCCACCACCTTCGCCGATCAGCTGAAGAAGGGAATCTCCAACGGC
ATTATCGGCGACCAGTCGGAGGCGCAAGCCTTTCAGCCGGCGCCGCAGTCCGAAGCGCCGAAACCCCCGAGCAATCCGCT
CGCCGGCCGACAACAAGCCGAAGCGTCGGCATCAACGCTCGAGCGGGAGGCAGTCTGGCGGGCGCGCCTCGAGCGGGAGG
CGCATGAGCAATATCTGCGCGAACGGCAGCGCGAGCGCATGGCGCGCGTCCAGGCCAACGATGCCGCCTATGATTCTCCA
CTTGCCCTCAATCTCGGCAAGCTTCAGACGTCGACCGCGCCGACGAGCGGCGGAGCACCGTCGAAGGCAACGTCGACACC
GGGCTTTGCCGGCGGCGCGAACGATCTCTACGCGGCGGCGCTGCGCGCGGGTTTCGGCACGCAGAACATCGATCCGAACG
GGCAGGGGGCGAAGGAGGACTTCTTCAACGCCGACCTGAAGAAGCTCGGCTACCTTCCCAACAAGGTGGTCGCGCCGACC
TCGGCCTATGAACTCAAACGCGGCTCGGTCATTCCGGCGACGTTGATCACCGGCATCAACTCCGATCTTCCCGGTCGCAT
CACCGCCCAGGTCAGCCAGAACGTCTACGACAGCGCCACGGGGCATGACCTGTTGATCCCGCAAGGCACGAAATTGTTGG
GGCGCTACGATTCCAAGATATCGTTCGGCCAAAGCCGTGTGCTGGTCATCTGGACGGACATCATCTTCCCGAACGGCGCG
ACGTTGCAGATCGGCGGCATGGCGGGCACGGATTCTGAAGGCTATGGCGGTTTCAACGATCAGGTCGACAACCACTATTT
CAAGGTGTTCGGCTCAGCGATCCTGATCGCTGCGATCGGCGCGGGCATCGATATGTCGGTGCCGGCGAGCTCTCCCTATG
GCTATCGGCAAACGCCAACGGACGCGGCGCGAAACAGCTTTGCCGAGACCTTCGGCCGCGTCGCCGAACAGACCATCAGC
AAGAATCTCAACGTCCAGCCGACGCTGGAGATTCGGCCGGGCTACGTATTCAACGTGCTCGTCGACCAGGACATGGTGTT
TCTAGGCGCTTACCGTGGATGA

Upstream 100 bases:

>100_bases
ACCGCACACGTCGAGCTCGGACGCACCTATGCCGCAACAACCGCCGGCGCGTCGCCGGCCAGTCCGCTCTCCGTCATGCG
GCGTGGATAGGGGACGGCTC

Downstream 100 bases:

>100_bases
AGTCCGCGCTATGATTACGATAGACTCTCTGTGAGATGCCGCTTTGTGCGCGAAATAAACGATCCAGTTGGCTGAATGAC
GATTGCTTCTCGTTCTCGCA

Product: conjugal transfer protein TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAQSLKLGGTPEGEEARGIRRLNQLPIIVAIVLVIVFFAVIFYGLTSRGLYVHRAAGIDTASSSPATTFADQLKKGISNG
IIGDQSEAQAFQPAPQSEAPKPPSNPLAGRQQAEASASTLEREAVWRARLEREAHEQYLRERQRERMARVQANDAAYDSP
LALNLGKLQTSTAPTSGGAPSKATSTPGFAGGANDLYAAALRAGFGTQNIDPNGQGAKEDFFNADLKKLGYLPNKVVAPT
SAYELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHDLLIPQGTKLLGRYDSKISFGQSRVLVIWTDIIFPNGA
TLQIGGMAGTDSEGYGGFNDQVDNHYFKVFGSAILIAAIGAGIDMSVPASSPYGYRQTPTDAARNSFAETFGRVAEQTIS
KNLNVQPTLEIRPGYVFNVLVDQDMVFLGAYRG

Sequences:

>Translated_433_residues
MAQSLKLGGTPEGEEARGIRRLNQLPIIVAIVLVIVFFAVIFYGLTSRGLYVHRAAGIDTASSSPATTFADQLKKGISNG
IIGDQSEAQAFQPAPQSEAPKPPSNPLAGRQQAEASASTLEREAVWRARLEREAHEQYLRERQRERMARVQANDAAYDSP
LALNLGKLQTSTAPTSGGAPSKATSTPGFAGGANDLYAAALRAGFGTQNIDPNGQGAKEDFFNADLKKLGYLPNKVVAPT
SAYELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHDLLIPQGTKLLGRYDSKISFGQSRVLVIWTDIIFPNGA
TLQIGGMAGTDSEGYGGFNDQVDNHYFKVFGSAILIAAIGAGIDMSVPASSPYGYRQTPTDAARNSFAETFGRVAEQTIS
KNLNVQPTLEIRPGYVFNVLVDQDMVFLGAYRG
>Mature_432_residues
AQSLKLGGTPEGEEARGIRRLNQLPIIVAIVLVIVFFAVIFYGLTSRGLYVHRAAGIDTASSSPATTFADQLKKGISNGI
IGDQSEAQAFQPAPQSEAPKPPSNPLAGRQQAEASASTLEREAVWRARLEREAHEQYLRERQRERMARVQANDAAYDSPL
ALNLGKLQTSTAPTSGGAPSKATSTPGFAGGANDLYAAALRAGFGTQNIDPNGQGAKEDFFNADLKKLGYLPNKVVAPTS
AYELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHDLLIPQGTKLLGRYDSKISFGQSRVLVIWTDIIFPNGAT
LQIGGMAGTDSEGYGGFNDQVDNHYFKVFGSAILIAAIGAGIDMSVPASSPYGYRQTPTDAARNSFAETFGRVAEQTISK
NLNVQPTLEIRPGYVFNVLVDQDMVFLGAYRG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 46189; Mature: 46058

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSLKLGGTPEGEEARGIRRLNQLPIIVAIVLVIVFFAVIFYGLTSRGLYVHRAAGIDT
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
ASSSPATTFADQLKKGISNGIIGDQSEAQAFQPAPQSEAPKPPSNPLAGRQQAEASASTL
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
EREAVWRARLEREAHEQYLRERQRERMARVQANDAAYDSPLALNLGKLQTSTAPTSGGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC
SKATSTPGFAGGANDLYAAALRAGFGTQNIDPNGQGAKEDFFNADLKKLGYLPNKVVAPT
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCC
SAYELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHDLLIPQGTKLLGRYDSKI
CHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCC
SFGQSRVLVIWTDIIFPNGATLQIGGMAGTDSEGYGGFNDQVDNHYFKVFGSAILIAAIG
CCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
AGIDMSVPASSPYGYRQTPTDAARNSFAETFGRVAEQTISKNLNVQPTLEIRPGYVFNVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE
VDQDMVFLGAYRG
ECCCEEEEECCCC
>Mature Secondary Structure 
AQSLKLGGTPEGEEARGIRRLNQLPIIVAIVLVIVFFAVIFYGLTSRGLYVHRAAGIDT
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
ASSSPATTFADQLKKGISNGIIGDQSEAQAFQPAPQSEAPKPPSNPLAGRQQAEASASTL
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
EREAVWRARLEREAHEQYLRERQRERMARVQANDAAYDSPLALNLGKLQTSTAPTSGGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC
SKATSTPGFAGGANDLYAAALRAGFGTQNIDPNGQGAKEDFFNADLKKLGYLPNKVVAPT
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCC
SAYELKRGSVIPATLITGINSDLPGRITAQVSQNVYDSATGHDLLIPQGTKLLGRYDSKI
CHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCC
SFGQSRVLVIWTDIIFPNGATLQIGGMAGTDSEGYGGFNDQVDNHYFKVFGSAILIAAIG
CCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
AGIDMSVPASSPYGYRQTPTDAARNSFAETFGRVAEQTISKNLNVQPTLEIRPGYVFNVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE
VDQDMVFLGAYRG
ECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]