Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790505

Identifier: 91790505

GI number: 91790505

Start: 4963929

End: 4964720

Strand: Reverse

Name: 91790505

Synonym: Bpro_4676

Alternate gene names: NA

Gene position: 4964720-4963929 (Counterclockwise)

Preceding gene: 91790506

Following gene: 91790503

Centisome position: 95.47

GC content: 59.97

Gene sequence:

>792_bases
ATGAAAGTACGTGTATTGGGCTGTTCGGGAGCCATTGCCAGGGACTGCCGCACCACGTCTTTTTTGCTGGACCATGATTT
GCTGGTCGACGCGGGTACGGGTGTCGGGGATCTCACCCTCGATGAAATGCGTGGCATTGACCACGTCCTGCTGACACATT
CCCATCTGGATCACGTGGCCGCGCTGCCGCTGATGGTGGACGCGATCGCCGGTCAGAAAACCAGGCCGATACAGATCCAT
GCCCTGCAAGGCACGATCGACGCGCTGAAGGCCCACATTTTCAACAACACGATCTGGCCCGATTTCTCAAGAATTCCAGA
TCCGGCAACACCTTTCATCAGTTTTCATCCGCTGGAGCTGGGTCAAACCCTGGAGTTGGCCGGCAAGCATATTGAAGTGC
TTCCCGCCGTGCACACGGTGCCAGCCGTCGGATATGCGGTGAGCGCCGGCAAGGGCTGCTGGGTGTTTACCGGCGACACC
GAGCGCAATCCTGCGCTGTGGGCCCGCATTAACCAGCTGGACGTCGCGATGCTGGTCATCGAGACCGCCTTCAGCAACCG
CGAGCGTGACCTGGCCAAACGCAGCCTGCATCTGGCGCCCCATGCGCTTGCCAGCGAACTTGACTGCATTGCAAGCGGCA
AGAGCTATCCCATCTACATCACCCACACCAAGCCCGCCGAGACAGAGCTCATCATGGCCGAGATCCAGCGCTTCGACCAG
ACGCGCACCCTGGCGCGCCACATTTCGCATGACATCCGGTGGCTGCGGGCGGGTCAGGAGTTTGAACTGTGA

Upstream 100 bases:

>100_bases
TGAAGCGTGTAGTCTCCACGAGCTGGCTGTTTTTTGACCCCAAGCGGGATGGCGCAACCAGTTTCGAAACCATGTAACCT
CAAGCCAGGGTGGAAACCTC

Downstream 100 bases:

>100_bases
AAGTCCTTGTTTAGGGCTCGTTCGGGAATAACTTGCACATTTGACTCGCCAGCTTCGGGCGCGCTGCGTTGTTGCGACTC
GCTTGTGTGGCCTGGCCACA

Product: cyclic-AMP phosphodiesterase

Products: NA

Alternate protein names: Cyclic-AMP Phosphodiesterase; Metal Dependent Phosphohydrolase; CAMP Phosphodiesterase; Beta-Lactamase Domain-Containing Protein; CAMP Phosphodiesterase Class-II; Beta-Lactamase-Like; 3 5'-Cyclic-Nucleotide Phosphodiesterase; Metallo-Beta-Lactamase; Response Regulator; CAMP Phosphodiesterases Class-II; Camp Phosphodiesterases Class-Ii; Cyclic-AMP Phosphodiesterase Class-II; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Superfamily Metal-Dependent Hydrolase; CAMP Phosphodiesterase-Like Protein; GAF Domain Protein; Beta-Lactamase-Like Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIH
ALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDT
ERNPALWARINQLDVAMLVIETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ
TRTLARHISHDIRWLRAGQEFEL

Sequences:

>Translated_263_residues
MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIH
ALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDT
ERNPALWARINQLDVAMLVIETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ
TRTLARHISHDIRWLRAGQEFEL
>Mature_263_residues
MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVAALPLMVDAIAGQKTRPIQIH
ALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLELGQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDT
ERNPALWARINQLDVAMLVIETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ
TRTLARHISHDIRWLRAGQEFEL

Specific function: Unknown

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29034; Mature: 29034

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVA
CEEEEEECCCCHHHHCCHHHEEECCCEEEECCCCCCCCCHHHHCCCCEEEEEHHHHHHHH
ALPLMVDAIAGQKTRPIQIHALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLEL
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCC
GQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDTERNPALWARINQLDVAMLVI
CCHHHHCCCEEEEEHHHHHHHHHCEEEECCCEEEEEECCCCCCCHHEEEHHHHHHHHHHH
ETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
TRTLARHISHDIRWLRAGQEFEL
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKVRVLGCSGAIARDCRTTSFLLDHDLLVDAGTGVGDLTLDEMRGIDHVLLTHSHLDHVA
CEEEEEECCCCHHHHCCHHHEEECCCEEEECCCCCCCCCHHHHCCCCEEEEEHHHHHHHH
ALPLMVDAIAGQKTRPIQIHALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHPLEL
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEECCCC
GQTLELAGKHIEVLPAVHTVPAVGYAVSAGKGCWVFTGDTERNPALWARINQLDVAMLVI
CCHHHHCCCEEEEEHHHHHHHHHCEEEECCCEEEEEECCCCCCCHHEEEHHHHHHHHHHH
ETAFSNRERDLAKRSLHLAPHALASELDCIASGKSYPIYITHTKPAETELIMAEIQRFDQ
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
TRTLARHISHDIRWLRAGQEFEL
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA