| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790504
Identifier: 91790504
GI number: 91790504
Start: 4963600
End: 4963947
Strand: Direct
Name: 91790504
Synonym: Bpro_4675
Alternate gene names: NA
Gene position: 4963600-4963947 (Clockwise)
Preceding gene: 91790500
Following gene: 91790512
Centisome position: 95.45
GC content: 59.2
Gene sequence:
>348_bases TTGTCACTTGATGCAGACGGATCGCACCCGCTTGAGGACCGTCACGCCCATCAGGACTTCTCCATGCCGTCCATTTTCAG GGTGCGCATGCTGCTGCTGACAGCGCAAGAGAATCGCATTCCTTCGACCACCCGGCCGTCGTATCTGGTCGCCCTAAGGG CTCGTTCGGGAATAGGTTGTGCATTTGGCCGTCGGATTCGGGATGCGCTGCCAGGCGCGGGGAGCGCCGTGTGGCCAGGC CACACAAGCGAGTCGCAACAACGCAGCGCGCCCGAAGCTGGCGAGTCAAATGTGCAAGTTATTCCCGAACGAGCCCTAAA CAAGGACTTTCACAGTTCAAACTCCTGA
Upstream 100 bases:
>100_bases GCCAAAGCCTCCAATTCGAGAACTTTTTCCTGCTTTTTAACCAGTCCCCGTCAGCACGACCGCTCTTTTTTGGCACGAAG CGCCCTCTCTCGCGACATTT
Downstream 100 bases:
>100_bases CCCGCCCGCAGCCACCGGATGTCATGCGAAATGTGGCGCGCCAGGGTGCGCGTCTGGTCGAAGCGCTGGATCTCGGCCAT GATGAGCTCTGTCTCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSLDADGSHPLEDRHAHQDFSMPSIFRVRMLLLTAQENRIPSTTRPSYLVALRARSGIGCAFGRRIRDALPGAGSAVWPG HTSESQQRSAPEAGESNVQVIPERALNKDFHSSNS
Sequences:
>Translated_115_residues MSLDADGSHPLEDRHAHQDFSMPSIFRVRMLLLTAQENRIPSTTRPSYLVALRARSGIGCAFGRRIRDALPGAGSAVWPG HTSESQQRSAPEAGESNVQVIPERALNKDFHSSNS >Mature_114_residues SLDADGSHPLEDRHAHQDFSMPSIFRVRMLLLTAQENRIPSTTRPSYLVALRARSGIGCAFGRRIRDALPGAGSAVWPGH TSESQQRSAPEAGESNVQVIPERALNKDFHSSNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12580; Mature: 12449
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDADGSHPLEDRHAHQDFSMPSIFRVRMLLLTAQENRIPSTTRPSYLVALRARSGIGC CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCH AFGRRIRDALPGAGSAVWPGHTSESQQRSAPEAGESNVQVIPERALNKDFHSSNS HHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCHHHCCCCCCCCCC >Mature Secondary Structure SLDADGSHPLEDRHAHQDFSMPSIFRVRMLLLTAQENRIPSTTRPSYLVALRARSGIGC CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCH AFGRRIRDALPGAGSAVWPGHTSESQQRSAPEAGESNVQVIPERALNKDFHSSNS HHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA