| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dctR [H]
Identifier: 91790481
GI number: 91790481
Start: 4937316
End: 4937942
Strand: Reverse
Name: dctR [H]
Synonym: Bpro_4652
Alternate gene names: 91790481
Gene position: 4937942-4937316 (Counterclockwise)
Preceding gene: 91790482
Following gene: 91790480
Centisome position: 94.96
GC content: 62.84
Gene sequence:
>627_bases ATGGAACCCATTCAAAATGCCACGGTTTATATCGTCGACGATGACGCCAGCGTACGCGATGCGCTGGCCTGGCTGTTGCG GTCGCGTCGTCTGCCCAGTGAGACCTTCGACAGCGCCGAGGCCTTCGATGCGCGGGTGTCGCAGCAGTTTGAGGTGAAGT CGCCTTCCTGCGTCCTGCTGGACGTGCGGATGGCGGGCCTGAGTGGTCTGGCCATGTTTGAGAAACTGATTGGCTACGGC CTGCTGCCGACCCTGCCGGTGATTTTCCTGACGGGCCATGCGGATGTGCCGACGGCCGTCGATGCGGTCAAGCGTGGCGC CTTTGATTTCTGCGAGAAGCCGTTTTCGGACAACGCACTCGTCGACCGCATCGAGCAGGCGCTCAAGTTTTCCGCGGCGG CGCTGGCCCAGCACAGCGAATCGATCAGCCGGCAGGCGCGGCTGGACGGGCTGACCGACCGCGAGCGGGATGTGATGCGG CTGGTGGTGGGCGGCCTGCCCAACAAGCTGGTGGCCGACCAGCTCGACATCAGTGTGCGGACGGTGGAAGTTCACCGTGC CCGCGTTTTTGACAAAATGGGAGTCAAGTCGGCGGTAGAGCTTGCGAACCTGCTACGAAACCTGTAG
Upstream 100 bases:
>100_bases ACGATTTTCAGTTTCACCTTGCCGGTGGCGCTGGCGCGGGATGGCCATGCCGATGTCGATGCCGCTGGTACCGCCAAGGA AATGGCCTAGAGTACGCACC
Downstream 100 bases:
>100_bases CGGGTTGGGTTTATTCCTTGTCGGCGCCGGCGTCTGATGCAGGGGGCACCGAATCGGCTTTCAGTTCGCCATTTTTTCGG CCTGAAAACATCGTCCACCA
Product: two component LuxR family transcriptional regulator
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEPIQNATVYIVDDDASVRDALAWLLRSRRLPSETFDSAEAFDARVSQQFEVKSPSCVLLDVRMAGLSGLAMFEKLIGYG LLPTLPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNALVDRIEQALKFSAAALAQHSESISRQARLDGLTDRERDVMR LVVGGLPNKLVADQLDISVRTVEVHRARVFDKMGVKSAVELANLLRNL
Sequences:
>Translated_208_residues MEPIQNATVYIVDDDASVRDALAWLLRSRRLPSETFDSAEAFDARVSQQFEVKSPSCVLLDVRMAGLSGLAMFEKLIGYG LLPTLPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNALVDRIEQALKFSAAALAQHSESISRQARLDGLTDRERDVMR LVVGGLPNKLVADQLDISVRTVEVHRARVFDKMGVKSAVELANLLRNL >Mature_208_residues MEPIQNATVYIVDDDASVRDALAWLLRSRRLPSETFDSAEAFDARVSQQFEVKSPSCVLLDVRMAGLSGLAMFEKLIGYG LLPTLPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNALVDRIEQALKFSAAALAQHSESISRQARLDGLTDRERDVMR LVVGGLPNKLVADQLDISVRTVEVHRARVFDKMGVKSAVELANLLRNL
Specific function: Member of the two-component regulatory system dctS/dctR involved in the transport of C4-dicarboxylates. DctR functions as a transcriptional repressor of genes for C4-dicarboxylate transport [H]
COG id: COG4566
COG function: function code T; Response regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=126, Percent_Identity=38.0952380952381, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786747, Length=208, Percent_Identity=25, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 22899; Mature: 22899
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPIQNATVYIVDDDASVRDALAWLLRSRRLPSETFDSAEAFDARVSQQFEVKSPSCVLL CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE DVRMAGLSGLAMFEKLIGYGLLPTLPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNAL EEHHHCCHHHHHHHHHHCCCCHHHHHHEEEECCCCCCHHHHHHHHCHHHHHCCCCCCCHH VDRIEQALKFSAAALAQHSESISRQARLDGLTDRERDVMRLVVGGLPNKLVADQLDISVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCEEE TVEVHRARVFDKMGVKSAVELANLLRNL HHHHHHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure MEPIQNATVYIVDDDASVRDALAWLLRSRRLPSETFDSAEAFDARVSQQFEVKSPSCVLL CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE DVRMAGLSGLAMFEKLIGYGLLPTLPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNAL EEHHHCCHHHHHHHHHHCCCCHHHHHHEEEECCCCCCHHHHHHHHCHHHHHCCCCCCCHH VDRIEQALKFSAAALAQHSESISRQARLDGLTDRERDVMRLVVGGLPNKLVADQLDISVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCEEE TVEVHRARVFDKMGVKSAVELANLLRNL HHHHHHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8455557 [H]