Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790448

Identifier: 91790448

GI number: 91790448

Start: 4900800

End: 4901582

Strand: Reverse

Name: 91790448

Synonym: Bpro_4619

Alternate gene names: NA

Gene position: 4901582-4900800 (Counterclockwise)

Preceding gene: 91790449

Following gene: 91790446

Centisome position: 94.26

GC content: 72.41

Gene sequence:

>783_bases
ATGAGCCTGACCCTCGACAAACGCCAGCGCGCCATGCTGCGCGAAATGGGGGTGCGGGTCTGGCTGCCGCAAGCGCCAGA
CCGGCCCGTAACGGTGCAAGCCGAGGTCGAATCTGCCATGGATGCGGTAGTCCCTGGTGCCGGGTTGGCGGGGGCTGCGG
TTCATTTCCCTGAAAACAGGCCGGTTGCGGTGCGAGAGCGCCCCGTGCCTGCGCAAGCACCCCAAGCGCCCTCAGCGCCC
CGGGCCGAGGCGCAGCCGGGCGGCGGGCCGGTGGGCTGGCGCGTCGGCGCCGCGCAGGCGCTGTACGCGGAAGGAGCCCA
GGCGCATGGCGCACGCTGGCTGGTGCTCGCCGAAACGCCAGCCGCGGCCCTGCAGGCCGAGCCCTTCAGCCCCTTCCTCG
GCGATGCTGGCAAGCTGCTCGACAACATGCTGCGCGCGGCCCGCTTGAACCAGGCCGGCGTCGTGTTGCTGGCGCCGCTG
GTCCGGCTGGCGGCCTCCGGCTCGGCGGCGGCCGGCCTGCAGGCGGCGCTGGCGGATCTGGCTGCCCATGCGCTGCCCGA
CGTGGTGCTGGTGATGGGCCGCCTGGCGGCGCAGGCGGTGTTGCAGTCCACCGAGCCCCTGGGCCGGCTCCGGGGCCAGG
TACACAGCGTGCTCGGTGCGAACACCGTCGTGACCTACGACGCCACCTACCTGCTGCGCAACCCGGCCGACAAAGCCAAG
GCCTGGGAAGACCTGTGCCTGGCCATGCGCCTGGCCCGCAGTTCGGCATCCCCTGACAACTGA

Upstream 100 bases:

>100_bases
TCGGCACGCGTCGCAACTACTACCCGGCCGGCGCGGCGCGGCGCGAAGACGCCATTGTCATGAGTCTGGCGCTGTGAGTC
CTCATGGTGAAAGCCCTCCA

Downstream 100 bases:

>100_bases
TTTCTCAGCCTGCTTTTTCGGCTTCGGACGAGCGGCCGGGTACCAGCACCGACGCGATGGCGACCACCATCAAGACCACG
GCAGTCCAATCCTGCCAGTG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase-Related Protein; Phage DNA Polymerase; Uracil-DNA Glycosylase Superfamily; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSLTLDKRQRAMLREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENRPVAVRERPVPAQAPQAPSAP
RAEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETPAAALQAEPFSPFLGDAGKLLDNMLRAARLNQAGVVLLAPL
VRLAASGSAAAGLQAALADLAAHALPDVVLVMGRLAAQAVLQSTEPLGRLRGQVHSVLGANTVVTYDATYLLRNPADKAK
AWEDLCLAMRLARSSASPDN

Sequences:

>Translated_260_residues
MSLTLDKRQRAMLREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENRPVAVRERPVPAQAPQAPSAP
RAEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETPAAALQAEPFSPFLGDAGKLLDNMLRAARLNQAGVVLLAPL
VRLAASGSAAAGLQAALADLAAHALPDVVLVMGRLAAQAVLQSTEPLGRLRGQVHSVLGANTVVTYDATYLLRNPADKAK
AWEDLCLAMRLARSSASPDN
>Mature_259_residues
SLTLDKRQRAMLREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENRPVAVRERPVPAQAPQAPSAPR
AEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETPAAALQAEPFSPFLGDAGKLLDNMLRAARLNQAGVVLLAPLV
RLAASGSAAAGLQAALADLAAHALPDVVLVMGRLAAQAVLQSTEPLGRLRGQVHSVLGANTVVTYDATYLLRNPADKAKA
WEDLCLAMRLARSSASPDN

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 27033; Mature: 26902

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTLDKRQRAMLREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENR
CCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEECCCCC
PVAVRERPVPAQAPQAPSAPRAEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETP
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC
AAALQAEPFSPFLGDAGKLLDNMLRAARLNQAGVVLLAPLVRLAASGSAAAGLQAALADL
HHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
AAHALPDVVLVMGRLAAQAVLQSTEPLGRLRGQVHSVLGANTVVTYDATYLLRNPADKAK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHEEECCCHHHHH
AWEDLCLAMRLARSSASPDN
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLTLDKRQRAMLREMGVRVWLPQAPDRPVTVQAEVESAMDAVVPGAGLAGAAVHFPENR
CCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEECCCCC
PVAVRERPVPAQAPQAPSAPRAEAQPGGGPVGWRVGAAQALYAEGAQAHGARWLVLAETP
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC
AAALQAEPFSPFLGDAGKLLDNMLRAARLNQAGVVLLAPLVRLAASGSAAAGLQAALADL
HHHHCCCCCCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
AAHALPDVVLVMGRLAAQAVLQSTEPLGRLRGQVHSVLGANTVVTYDATYLLRNPADKAK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHEEECCCHHHHH
AWEDLCLAMRLARSSASPDN
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA