Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is rimI [H]

Identifier: 91790449

GI number: 91790449

Start: 4901606

End: 4902109

Strand: Reverse

Name: rimI [H]

Synonym: Bpro_4620

Alternate gene names: 91790449

Gene position: 4902109-4901606 (Counterclockwise)

Preceding gene: 91790450

Following gene: 91790448

Centisome position: 94.27

GC content: 65.87

Gene sequence:

>504_bases
ATGAACGCTGTTTTCAAACCCCTCGAAGCCCAGTTCGAAGCCATGACACCCGCGTGGCTGGAGGCGGTCGTGCGGGTGGA
GCAAAGCGCCTACGAGCATCCGTGGACGCAGGGCAATTTCGCCGATTCGCTCAAGGCCGGCTACCAGGCGCAGCTGCTGA
CGGGCGGCAACCACGCGGGCCCGACTGCCGGTGGCCCCCCGTACAACGAGTTGCTGGGCTATTTTGTGGCCATGAAGGGT
GTGGACGAGGTGCATCTGCTCAACATCACCGTGGCCCCAGCCCATCAGCGCCAGGGGTGGGCGCAGGTCATGCTGGACGC
GCTGGCCCTGTGGTCGCGCGGGCAGGGCGCGCAGTGGCTGTGGCTGGAAGTGCGCATGAGCAACGTGCGCGCCCAGGCCG
TTTATGAACGCTATGGTTTTCGCCATGTCGGCACGCGTCGCAACTACTACCCGGCCGGCGCGGCGCGGCGCGAAGACGCC
ATTGTCATGAGTCTGGCGCTGTGA

Upstream 100 bases:

>100_bases
GTAGCGCTGACCACCGACGAACGGGCCGAGGTCAAGGCCCGGGCGGCGCTTGCAGCCCTGTCGGCCGCCAACTCCGCCTG
AAGCCGCTGGCCATCCTTCC

Downstream 100 bases:

>100_bases
GTCCTCATGGTGAAAGCCCTCCAATGAGCCTGACCCTCGACAAACGCCAGCGCGCCATGCTGCGCGAAATGGGGGTGCGG
GTCTGGCTGCCGCAAGCGCC

Product: 30S ribosomal protein S18P alanine acetyltransferase

Products: NA

Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNAVFKPLEAQFEAMTPAWLEAVVRVEQSAYEHPWTQGNFADSLKAGYQAQLLTGGNHAGPTAGGPPYNELLGYFVAMKG
VDEVHLLNITVAPAHQRQGWAQVMLDALALWSRGQGAQWLWLEVRMSNVRAQAVYERYGFRHVGTRRNYYPAGAARREDA
IVMSLAL

Sequences:

>Translated_167_residues
MNAVFKPLEAQFEAMTPAWLEAVVRVEQSAYEHPWTQGNFADSLKAGYQAQLLTGGNHAGPTAGGPPYNELLGYFVAMKG
VDEVHLLNITVAPAHQRQGWAQVMLDALALWSRGQGAQWLWLEVRMSNVRAQAVYERYGFRHVGTRRNYYPAGAARREDA
IVMSLAL
>Mature_167_residues
MNAVFKPLEAQFEAMTPAWLEAVVRVEQSAYEHPWTQGNFADSLKAGYQAQLLTGGNHAGPTAGGPPYNELLGYFVAMKG
VDEVHLLNITVAPAHQRQGWAQVMLDALALWSRGQGAQWLWLEVRMSNVRAQAVYERYGFRHVGTRRNYYPAGAARREDA
IVMSLAL

Specific function: This enzyme acetylates the N-terminal alanine of a ribosomal protein S18 [H]

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI2367381, Length=149, Percent_Identity=36.9127516778523, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006464 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 18588; Mature: 18588

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVFKPLEAQFEAMTPAWLEAVVRVEQSAYEHPWTQGNFADSLKAGYQAQLLTGGNHAG
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCC
PTAGGPPYNELLGYFVAMKGVDEVHLLNITVAPAHQRQGWAQVMLDALALWSRGQGAQWL
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCEEE
WLEVRMSNVRAQAVYERYGFRHVGTRRNYYPAGAARREDAIVMSLAL
EEEEEEHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MNAVFKPLEAQFEAMTPAWLEAVVRVEQSAYEHPWTQGNFADSLKAGYQAQLLTGGNHAG
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCC
PTAGGPPYNELLGYFVAMKGVDEVHLLNITVAPAHQRQGWAQVMLDALALWSRGQGAQWL
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCEEE
WLEVRMSNVRAQAVYERYGFRHVGTRRNYYPAGAARREDAIVMSLAL
EEEEEEHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA