| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is narQ [H]
Identifier: 91790428
GI number: 91790428
Start: 4876063
End: 4877976
Strand: Reverse
Name: narQ [H]
Synonym: Bpro_4599
Alternate gene names: 91790428
Gene position: 4877976-4876063 (Counterclockwise)
Preceding gene: 91790429
Following gene: 91790427
Centisome position: 93.8
GC content: 66.56
Gene sequence:
>1914_bases ATGCAGCACACGGCCTCGCTCTCCAAAAAACTCGTTCGCATAGGCGCCAGCCTGCTGGTCGTTTCGCTGATCTCCATCGG GCTGACCCTTTGGGTGACGTGGCAGCTCGAGGGAGGCGCAGCGGCCGTCAATGAGGCCGGGCGCATGCGCATGCAGACCT GGCGGCTGGTCAGCGCGGTGCAGGCCGGCGTGGAGCGCGCCGAGCTGCAGGGCCTCGTGGTCCGGTTCGATGAGAGTCTG GCCGTGCTGCGCGAGGGGGACCCTTCCAGGCCGCTGTTCGTGCCCTGGGACGACCAGGTGCGCCAGCGTTTTGCCGAAGT CGAGTCCCTGTGGCGCGATCAGCGGCCGTTGTGGCTGGCCGAACCGGCTCCGCAGGTGCAGGTCCTGCAGAAGGCCGGGG AGGAGTTTGTGGCGGCCAGCGACCGCCTGGTGCTGGTGATCGAGCAGCACCAGTCCCGGCTGACCGCCATCCTGAACCTG TTTCAGCTCCTGCTGCTGGCACTGGCCATTGGTGGGGCGGTCATCATGCTCTATACCGGGTACATGTATGTGATCAACCC CCTGGGGCAGCTTCGCCAGGGCTTGCGCAAGCTGGAGTCCGGGGATTTCAGGACGCGTATCGAGGTCGACACCGTGGACG AGTTTGGCCAGGTAGCGGCCGGCTTCAACCACATGGCGGCGACCCTGCAGTCGCTCTATGAAGGGCTGGAAGCCAAGGTC GAGGCCAAGACGCGGCGCATCGAGGCGCAACACGCCCGGCTCGAGGCGCTCTACAAGGTCAGCGCATTTCTGGCCCAGGC CGGGAGCATTGACGAGCTGGCGCGCGGGTTTGCCCAGCGCGTGCGCGCCGTGATGAAGGCCGACGCGGCAGCGGTCCGCT GGTCTGACGATGCCAACCAGCGTTACCTGATGCTGGCTTCCGACTGCTTTCCGCAGGACCTGGTGGAGGAAGAGCGCAGC CTGCTGGCCGGGGCCTGTGCCTGCGGCAACCTGCGGCCGGACGCGCGCACCCGCGTGATTCCGATTCTCAGCCACGACGA AGCGCCCGTTCGCCATTGCGCCAAGGTGGGCTACGAAAGCGTGGTCAGCGTGCCGATACGGCTGCAGCAGCGCCTGCTCG GCGAGTTCAACCTGTTCTTTCGCGCGCCTGTCCTGCTGAGCGCCGACGAAATCGAACTGCTGGATGCGCTGGCCAGCCAC CTGGCCAGTTCGCTGGAAGGTTTGCGCGCCGACGCCCTGGACCGGGAGGCGGCGGTTGCGGAGGAGCGCGCGCTGCTGGC GCGCAACCTGCATGACTCGATTGCGCAGTCGCTGGCATTTCTCAAGATCCAGGTGCAGCTGCTGCGGACAGCCGTGCAGA AGGGGCAGGAGCCCCAGGTGCAGGGCGCACTCGACGAACTGGACCTCGGGCTGCGCGAAAGCATTGGCGACGTTCGCGAA CTGCTGGTGCATTTCCGCACGCGCACCAACACCGACGACATCGAGCAGGCGCTGCAGGAAACGCTGCAGAAATTCCAGAG CCAGACAGCTTTGCCTGCACAGCTGCAGGTCCAGGGTCAGGGTCTCCCGCTGCCGTCCGACGTTCAGGTGCAGGTGCTGC ACGTGGTGCAGGAGGCGCTGTCCAATGTGCGCAAGCATGCCGGCGCCACGCAGGTCGACCTGGAAGTGGCCAAGGGCGCG CGCTGGCGTTTTGTGGTGCGCGACAACGGTGCCGGTTTCGATACCGGAAAGCACCCGGGAGAGTCGCATGTCGGCCTCAA CATCATGCGCGAGCGTGCCGGGCGCATCGGTGCCGAGGTGGACATTGTCTCCACGGCGGGTCAGGGAACCACGGTGACGC TGACACTGCCGCCGCATCCGGAGGTGAGCGGCGGTGTGGCGACGAAGATACCGGATCCGGCACCCGCCGACTGA
Upstream 100 bases:
>100_bases CTGCACCGGCTGGCCGGCATGGTCTGCCGGGAGTGCGCGGCACCGTCCGCTGCGCCTCGCGGGTTGCGCAATCCGGTGGA GATCGCACGGGGCTAGAGGC
Downstream 100 bases:
>100_bases GGAATGAACACGATGAAAGCTGTTGAATTGCTGGTAGTCGACGACCACACCCTGTTTCGCCGCGGACTCGTTGCGCTGCT GTCGCAGGATGGGCGCTTCG
Product: signal transduction histidine kinase, nitrate/nitrite-specific, NarQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MQHTASLSKKLVRIGASLLVVSLISIGLTLWVTWQLEGGAAAVNEAGRMRMQTWRLVSAVQAGVERAELQGLVVRFDESL AVLREGDPSRPLFVPWDDQVRQRFAEVESLWRDQRPLWLAEPAPQVQVLQKAGEEFVAASDRLVLVIEQHQSRLTAILNL FQLLLLALAIGGAVIMLYTGYMYVINPLGQLRQGLRKLESGDFRTRIEVDTVDEFGQVAAGFNHMAATLQSLYEGLEAKV EAKTRRIEAQHARLEALYKVSAFLAQAGSIDELARGFAQRVRAVMKADAAAVRWSDDANQRYLMLASDCFPQDLVEEERS LLAGACACGNLRPDARTRVIPILSHDEAPVRHCAKVGYESVVSVPIRLQQRLLGEFNLFFRAPVLLSADEIELLDALASH LASSLEGLRADALDREAAVAEERALLARNLHDSIAQSLAFLKIQVQLLRTAVQKGQEPQVQGALDELDLGLRESIGDVRE LLVHFRTRTNTDDIEQALQETLQKFQSQTALPAQLQVQGQGLPLPSDVQVQVLHVVQEALSNVRKHAGATQVDLEVAKGA RWRFVVRDNGAGFDTGKHPGESHVGLNIMRERAGRIGAEVDIVSTAGQGTTVTLTLPPHPEVSGGVATKIPDPAPAD
Sequences:
>Translated_637_residues MQHTASLSKKLVRIGASLLVVSLISIGLTLWVTWQLEGGAAAVNEAGRMRMQTWRLVSAVQAGVERAELQGLVVRFDESL AVLREGDPSRPLFVPWDDQVRQRFAEVESLWRDQRPLWLAEPAPQVQVLQKAGEEFVAASDRLVLVIEQHQSRLTAILNL FQLLLLALAIGGAVIMLYTGYMYVINPLGQLRQGLRKLESGDFRTRIEVDTVDEFGQVAAGFNHMAATLQSLYEGLEAKV EAKTRRIEAQHARLEALYKVSAFLAQAGSIDELARGFAQRVRAVMKADAAAVRWSDDANQRYLMLASDCFPQDLVEEERS LLAGACACGNLRPDARTRVIPILSHDEAPVRHCAKVGYESVVSVPIRLQQRLLGEFNLFFRAPVLLSADEIELLDALASH LASSLEGLRADALDREAAVAEERALLARNLHDSIAQSLAFLKIQVQLLRTAVQKGQEPQVQGALDELDLGLRESIGDVRE LLVHFRTRTNTDDIEQALQETLQKFQSQTALPAQLQVQGQGLPLPSDVQVQVLHVVQEALSNVRKHAGATQVDLEVAKGA RWRFVVRDNGAGFDTGKHPGESHVGLNIMRERAGRIGAEVDIVSTAGQGTTVTLTLPPHPEVSGGVATKIPDPAPAD >Mature_637_residues MQHTASLSKKLVRIGASLLVVSLISIGLTLWVTWQLEGGAAAVNEAGRMRMQTWRLVSAVQAGVERAELQGLVVRFDESL AVLREGDPSRPLFVPWDDQVRQRFAEVESLWRDQRPLWLAEPAPQVQVLQKAGEEFVAASDRLVLVIEQHQSRLTAILNL FQLLLLALAIGGAVIMLYTGYMYVINPLGQLRQGLRKLESGDFRTRIEVDTVDEFGQVAAGFNHMAATLQSLYEGLEAKV EAKTRRIEAQHARLEALYKVSAFLAQAGSIDELARGFAQRVRAVMKADAAAVRWSDDANQRYLMLASDCFPQDLVEEERS LLAGACACGNLRPDARTRVIPILSHDEAPVRHCAKVGYESVVSVPIRLQQRLLGEFNLFFRAPVLLSADEIELLDALASH LASSLEGLRADALDREAAVAEERALLARNLHDSIAQSLAFLKIQVQLLRTAVQKGQEPQVQGALDELDLGLRESIGDVRE LLVHFRTRTNTDDIEQALQETLQKFQSQTALPAQLQVQGQGLPLPSDVQVQVLHVVQEALSNVRKHAGATQVDLEVAKGA RWRFVVRDNGAGFDTGKHPGESHVGLNIMRERAGRIGAEVDIVSTAGQGTTVTLTLPPHPEVSGGVATKIPDPAPAD
Specific function: Acts as a sensor for nitrate/nitrite and transduces signal of nitrate/nitrite availability to the narL/narP proteins. NarQ probably activates narL and narP by phosphorylation. NarQ probably negatively regulates the narL protein by dephosphorylation [H]
COG id: COG3850
COG function: function code T; Signal transduction histidine kinase, nitrate/nitrite-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788812, Length=623, Percent_Identity=27.4478330658106, Blast_Score=178, Evalue=8e-46, Organism=Escherichia coli, GI1787474, Length=235, Percent_Identity=32.3404255319149, Blast_Score=105, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR016380 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 69850; Mature: 69850
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHTASLSKKLVRIGASLLVVSLISIGLTLWVTWQLEGGAAAVNEAGRMRMQTWRLVSAV CCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH QAGVERAELQGLVVRFDESLAVLREGDPSRPLFVPWDDQVRQRFAEVESLWRDQRPLWLA HHHHHHHHHHHHHEEECCHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEE EPAPQVQVLQKAGEEFVAASDRLVLVIEQHQSRLTAILNLFQLLLLALAIGGAVIMLYTG CCCHHHHHHHHCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YMYVINPLGQLRQGLRKLESGDFRTRIEVDTVDEFGQVAAGFNHMAATLQSLYEGLEAKV HHHHHCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKTRRIEAQHARLEALYKVSAFLAQAGSIDELARGFAQRVRAVMKADAAAVRWSDDANQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHEEEECCCCCC RYLMLASDCFPQDLVEEERSLLAGACACGNLRPDARTRVIPILSHDEAPVRHCAKVGYES EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCHHH VVSVPIRLQQRLLGEFNLFFRAPVLLSADEIELLDALASHLASSLEGLRADALDREAAVA HHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EERALLARNLHDSIAQSLAFLKIQVQLLRTAVQKGQEPQVQGALDELDLGLRESIGDVRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCHHHHHHHHHH LLVHFRTRTNTDDIEQALQETLQKFQSQTALPAQLQVQGQGLPLPSDVQVQVLHVVQEAL HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH SNVRKHAGATQVDLEVAKGARWRFVVRDNGAGFDTGKHPGESHVGLNIMRERAGRIGAEV HHHHHHCCCCEEEHEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEE DIVSTAGQGTTVTLTLPPHPEVSGGVATKIPDPAPAD EEEEECCCCEEEEEEECCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MQHTASLSKKLVRIGASLLVVSLISIGLTLWVTWQLEGGAAAVNEAGRMRMQTWRLVSAV CCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH QAGVERAELQGLVVRFDESLAVLREGDPSRPLFVPWDDQVRQRFAEVESLWRDQRPLWLA HHHHHHHHHHHHHEEECCHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEE EPAPQVQVLQKAGEEFVAASDRLVLVIEQHQSRLTAILNLFQLLLLALAIGGAVIMLYTG CCCHHHHHHHHCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YMYVINPLGQLRQGLRKLESGDFRTRIEVDTVDEFGQVAAGFNHMAATLQSLYEGLEAKV HHHHHCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKTRRIEAQHARLEALYKVSAFLAQAGSIDELARGFAQRVRAVMKADAAAVRWSDDANQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHEEEECCCCCC RYLMLASDCFPQDLVEEERSLLAGACACGNLRPDARTRVIPILSHDEAPVRHCAKVGYES EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCHHH VVSVPIRLQQRLLGEFNLFFRAPVLLSADEIELLDALASHLASSLEGLRADALDREAAVA HHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EERALLARNLHDSIAQSLAFLKIQVQLLRTAVQKGQEPQVQGALDELDLGLRESIGDVRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCHHHHHHHHHH LLVHFRTRTNTDDIEQALQETLQKFQSQTALPAQLQVQGQGLPLPSDVQVQVLHVVQEAL HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH SNVRKHAGATQVDLEVAKGARWRFVVRDNGAGFDTGKHPGESHVGLNIMRERAGRIGAEV HHHHHHCCCCEEEHEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEE DIVSTAGQGTTVTLTLPPHPEVSGGVATKIPDPAPAD EEEEECCCCEEEEEEECCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1528845; 1508040; 9205837; 9278503 [H]