| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cynT [H]
Identifier: 91790419
GI number: 91790419
Start: 4863691
End: 4864458
Strand: Reverse
Name: cynT [H]
Synonym: Bpro_4590
Alternate gene names: 91790419
Gene position: 4864458-4863691 (Counterclockwise)
Preceding gene: 91790420
Following gene: 91790418
Centisome position: 93.54
GC content: 64.06
Gene sequence:
>768_bases ATGAATGAAAACGCGGACCCCGCGGACGAACTGCTGTTGCGTCTGCGGCGTTTCCACTCCGACTATTTTCCGCTGCACCA GCAGCGCTTCCAGGACCTGGTGGCCCAGGGACAGCATCCCAAGACGCTGTTCATCGGCTGCTCGGACTCGCGTCTGGTGC CTTACCTGCTGACCGGTGCCGGCCCCGGGGAGCTGTTCATTGTGCGCAACGTGGGGGCCTTCATTCCCCCTTATGACGGC TACGTCACCGACCCGCATGAGCCCGGTGGCGGCTGCCCGCCGGGAGGGCGTGCGCGTCTGGAGGCCGCCCGGCAGTGGGT GGGCCTGCATGGCACCACGGCGGCGATTGAGTTCGCGGTGCTGAATCTGCATGTGGAGCGCATCATCGTCTGTGGGCACA GCCATTGCGGCGCCATCCGCGCTGCCTACGACGGGGTTTCGGCGGAGGCGGTGGCGCTACAGGCCTGGCTCAAGCTGGCC CGTGAAGCCCTGCTGCCCGTGCAGTCCAGCCCCGAGGCCTTGCGCCGCACCGAGCAGCGCGCGGTGGTGCTGCAGCTGGA GCGCCTGATGGGCTATCCCATGGTCAGGCGCGAGGTGGAAAACGGCAGGCTCACGCTGCATGGCTGGCATTACGTGATTG AAGATGGTGAAGTCCATACCTTTGATGTACGACAAGGAAATTTTGTGCCGGCTTCTGTAGCCTCGAATAGCGGCACTGGC CCGTACCAACCTTATGTGGAGCGCGATGGACAAATCTTTTCCAGCTGA
Upstream 100 bases:
>100_bases AGTCGCGCGCCAGGGCGCTGCACCAGTACATGTGCCTGCTGGTGGGTGAGGCCGAGGTCGAAGGCATCACGCTGGAAGGG GCTGATTCGCCTCTGGTGCA
Downstream 100 bases:
>100_bases CCCGGCCGAGACGGCCGGTGTCGACGCAGCGGCGGTGGCTGCCGCTTTGCAGGCGCTTTCGCGCGATTCGGGCCTGCGGC CCTGGCAGCTTGGCAACAAG
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase 1 [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNENADPADELLLRLRRFHSDYFPLHQQRFQDLVAQGQHPKTLFIGCSDSRLVPYLLTGAGPGELFIVRNVGAFIPPYDG YVTDPHEPGGGCPPGGRARLEAARQWVGLHGTTAAIEFAVLNLHVERIIVCGHSHCGAIRAAYDGVSAEAVALQAWLKLA REALLPVQSSPEALRRTEQRAVVLQLERLMGYPMVRREVENGRLTLHGWHYVIEDGEVHTFDVRQGNFVPASVASNSGTG PYQPYVERDGQIFSS
Sequences:
>Translated_255_residues MNENADPADELLLRLRRFHSDYFPLHQQRFQDLVAQGQHPKTLFIGCSDSRLVPYLLTGAGPGELFIVRNVGAFIPPYDG YVTDPHEPGGGCPPGGRARLEAARQWVGLHGTTAAIEFAVLNLHVERIIVCGHSHCGAIRAAYDGVSAEAVALQAWLKLA REALLPVQSSPEALRRTEQRAVVLQLERLMGYPMVRREVENGRLTLHGWHYVIEDGEVHTFDVRQGNFVPASVASNSGTG PYQPYVERDGQIFSS >Mature_255_residues MNENADPADELLLRLRRFHSDYFPLHQQRFQDLVAQGQHPKTLFIGCSDSRLVPYLLTGAGPGELFIVRNVGAFIPPYDG YVTDPHEPGGGCPPGGRARLEAARQWVGLHGTTAAIEFAVLNLHVERIIVCGHSHCGAIRAAYDGVSAEAVALQAWLKLA REALLPVQSSPEALRRTEQRAVVLQLERLMGYPMVRREVENGRLTLHGWHYVIEDGEVHTFDVRQGNFVPASVASNSGTG PYQPYVERDGQIFSS
Specific function: Reversible hydration of carbon dioxide. Carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (CynS) diffuses out of the cell faster than it would be hydrated to bicarbonate, so the apparent function of this enzyme is to c
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786534, Length=227, Percent_Identity=35.6828193832599, Blast_Score=133, Evalue=1e-32, Organism=Caenorhabditis elegans, GI115532990, Length=241, Percent_Identity=25.3112033195021, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 28173; Mature: 28173
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENADPADELLLRLRRFHSDYFPLHQQRFQDLVAQGQHPKTLFIGCSDSRLVPYLLTGA CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECC GPGELFIVRNVGAFIPPYDGYVTDPHEPGGGCPPGGRARLEAARQWVGLHGTTAAIEFAV CCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH LNLHVERIIVCGHSHCGAIRAAYDGVSAEAVALQAWLKLAREALLPVQSSPEALRRTEQR EEEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AVVLQLERLMGYPMVRREVENGRLTLHGWHYVIEDGEVHTFDVRQGNFVPASVASNSGTG HHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCC PYQPYVERDGQIFSS CCCCHHCCCCEECCC >Mature Secondary Structure MNENADPADELLLRLRRFHSDYFPLHQQRFQDLVAQGQHPKTLFIGCSDSRLVPYLLTGA CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECC GPGELFIVRNVGAFIPPYDGYVTDPHEPGGGCPPGGRARLEAARQWVGLHGTTAAIEFAV CCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH LNLHVERIIVCGHSHCGAIRAAYDGVSAEAVALQAWLKLAREALLPVQSSPEALRRTEQR EEEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AVVLQLERLMGYPMVRREVENGRLTLHGWHYVIEDGEVHTFDVRQGNFVPASVASNSGTG HHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCC PYQPYVERDGQIFSS CCCCHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]