| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pgpA [H]
Identifier: 91790307
GI number: 91790307
Start: 4731613
End: 4732158
Strand: Direct
Name: pgpA [H]
Synonym: Bpro_4475
Alternate gene names: 91790307
Gene position: 4731613-4732158 (Clockwise)
Preceding gene: 91790306
Following gene: 91790308
Centisome position: 90.99
GC content: 66.85
Gene sequence:
>546_bases ATGACCACCATGAGCGATCCCCCCCCTCCGCCAGAGCCCCTCAACCCGCCCGGAACCCGGCCCAACGCCCGGTTTCTGCT GGCGCATCCGGCGCATTTCATCGCCCTGGGTTTTGGCTCTGGCCTCAGCCCGGTGGCGCCCGGCACGGCCGGCACCCTGT GGGCCTGGCTATCATTTCTGGTGCTGCAGCGCTGGCTGGCGCCCGCAGAGATGGGCTGGCTGATTGCCGCCTCTGCGCTG GTGGGCTGGTGGGCCTGCACGGTGACCGCTAAAAACATGCGGGTGCTAGACCCCGGCAGCATCGTCTGGGACGAAGTGGT GGCTTTCTGGCTGGTGCTGTGGCTGGTGATGCCCGCGGGTTTCTGGGGCCAGCTGGTGGCATTTGGCCTGTTCCGGTTTT TTGATGCGGTCAAGCCGGGCCCCGTGGCCTGGGCCGACCGGCACTTCAAGGGCCTGGGTGCCCGTGGCGGCTTTGGCATC CTGTTCGACGACATCGTCGCCGCGTTCTGCACCCTGCTGGTGATTGCCCTCTGGAGATTCTGGTGA
Upstream 100 bases:
>100_bases CCGTTTACGCGGTTACTCTTACCAGCCGCCACCGCCTGCCCAAAATCAGGGCCTGCATCGACCACTGGACCGAATGGTTT GAAAAAACCAGAACTACCCC
Downstream 100 bases:
>100_bases GCAGCGAATTGCCATCAAAAGATGAGCCATCTACCCTGGCACTGGTTGGGCTGGTGGCCGATTTACTGCTGAAAAAGCAA TGGATGATGGCCACTGCCGA
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFLVLQRWLAPAEMGWLIAASAL VGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAGFWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGI LFDDIVAAFCTLLVIALWRFW
Sequences:
>Translated_181_residues MTTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFLVLQRWLAPAEMGWLIAASAL VGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAGFWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGI LFDDIVAAFCTLLVIALWRFW >Mature_180_residues TTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFLVLQRWLAPAEMGWLIAASALV GWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAGFWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGIL FDDIVAAFCTLLVIALWRFW
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=151, Percent_Identity=39.7350993377483, Blast_Score=98, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 19829; Mature: 19698
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFL CCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHEEEEECCCCCCCCCCCCHHHHHHHHHHH VLQRWLAPAEMGWLIAASALVGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAG HHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCC FWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGILFDDIVAAFCTLLVIALWRF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC W C >Mature Secondary Structure TTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFL CCCCCCCCCCCCCCCCCCCCCCEEEEECCHHEEEEECCCCCCCCCCCCHHHHHHHHHHH VLQRWLAPAEMGWLIAASALVGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAG HHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCC FWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGILFDDIVAAFCTLLVIALWRF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC W C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]