Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is pgpA [H]

Identifier: 91790307

GI number: 91790307

Start: 4731613

End: 4732158

Strand: Direct

Name: pgpA [H]

Synonym: Bpro_4475

Alternate gene names: 91790307

Gene position: 4731613-4732158 (Clockwise)

Preceding gene: 91790306

Following gene: 91790308

Centisome position: 90.99

GC content: 66.85

Gene sequence:

>546_bases
ATGACCACCATGAGCGATCCCCCCCCTCCGCCAGAGCCCCTCAACCCGCCCGGAACCCGGCCCAACGCCCGGTTTCTGCT
GGCGCATCCGGCGCATTTCATCGCCCTGGGTTTTGGCTCTGGCCTCAGCCCGGTGGCGCCCGGCACGGCCGGCACCCTGT
GGGCCTGGCTATCATTTCTGGTGCTGCAGCGCTGGCTGGCGCCCGCAGAGATGGGCTGGCTGATTGCCGCCTCTGCGCTG
GTGGGCTGGTGGGCCTGCACGGTGACCGCTAAAAACATGCGGGTGCTAGACCCCGGCAGCATCGTCTGGGACGAAGTGGT
GGCTTTCTGGCTGGTGCTGTGGCTGGTGATGCCCGCGGGTTTCTGGGGCCAGCTGGTGGCATTTGGCCTGTTCCGGTTTT
TTGATGCGGTCAAGCCGGGCCCCGTGGCCTGGGCCGACCGGCACTTCAAGGGCCTGGGTGCCCGTGGCGGCTTTGGCATC
CTGTTCGACGACATCGTCGCCGCGTTCTGCACCCTGCTGGTGATTGCCCTCTGGAGATTCTGGTGA

Upstream 100 bases:

>100_bases
CCGTTTACGCGGTTACTCTTACCAGCCGCCACCGCCTGCCCAAAATCAGGGCCTGCATCGACCACTGGACCGAATGGTTT
GAAAAAACCAGAACTACCCC

Downstream 100 bases:

>100_bases
GCAGCGAATTGCCATCAAAAGATGAGCCATCTACCCTGGCACTGGTTGGGCTGGTGGCCGATTTACTGCTGAAAAAGCAA
TGGATGATGGCCACTGCCGA

Product: phosphatidylglycerophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFLVLQRWLAPAEMGWLIAASAL
VGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAGFWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGI
LFDDIVAAFCTLLVIALWRFW

Sequences:

>Translated_181_residues
MTTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFLVLQRWLAPAEMGWLIAASAL
VGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAGFWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGI
LFDDIVAAFCTLLVIALWRFW
>Mature_180_residues
TTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFLVLQRWLAPAEMGWLIAASALV
GWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAGFWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGIL
FDDIVAAFCTLLVIALWRFW

Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=151, Percent_Identity=39.7350993377483, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 19829; Mature: 19698

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFL
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHEEEEECCCCCCCCCCCCHHHHHHHHHHH
VLQRWLAPAEMGWLIAASALVGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAG
HHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCC
FWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGILFDDIVAAFCTLLVIALWRF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
W
C
>Mature Secondary Structure 
TTMSDPPPPPEPLNPPGTRPNARFLLAHPAHFIALGFGSGLSPVAPGTAGTLWAWLSFL
CCCCCCCCCCCCCCCCCCCCCCEEEEECCHHEEEEECCCCCCCCCCCCHHHHHHHHHHH
VLQRWLAPAEMGWLIAASALVGWWACTVTAKNMRVLDPGSIVWDEVVAFWLVLWLVMPAG
HHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCC
FWGQLVAFGLFRFFDAVKPGPVAWADRHFKGLGARGGFGILFDDIVAAFCTLLVIALWRF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2846510; 9278503 [H]