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The map label for this gene is ltrA [H]

Identifier: 91790306

GI number: 91790306

Start: 4730708

End: 4731616

Strand: Direct

Name: ltrA [H]

Synonym: Bpro_4474

Alternate gene names: 91790306

Gene position: 4730708-4731616 (Clockwise)

Preceding gene: 91790304

Following gene: 91790307

Centisome position: 90.97

GC content: 66.78

Gene sequence:

>909_bases
ATGCGCCACCTCGACTTCGACGACATGCACCTGTTCGCCCGCGTGGCCGAGCTGGGCACGCTCTCGGCCGTGGCGCGCGA
GCGCGAAGTGCCAGTCAGTCAGGTCTCGCGCACCTTGGCGCGCATTGAAAAAGCCTGCGGCGCGCGGCTGATCCACCGCT
CCACCCACGGCCTGGCGCCCACGGCCGAGGGTGAAACCTTTTTGCAGTACTGCCGCCGCATAATTGGCACGCTCGACGAG
CTGGAAGGCGAATTTGCCCAGCAGACCCAGCAAGCCAGCGGCTGGGTGCGCGTGGCCGCCAGCACCGTGATGGCCGAATA
CCTGCTGGTGCCCAGCCTCGCAAGCCTGCACCAGCGCCACCCGCGGCTGTGCGTGGAGTTCCAGGTGGAAGACCGGCTGG
TGGACATGGCGCACGACGGCATCGATATCGCCATCCGCACCGGTGTGCCACCCACTGACACCGTGGTAGCGCGGCAAATC
GGCGCGCTGGGCCGCAGGCTGTATGCCACGCCGGGCTACCTGCAGGCGCATGGCACGCCCAGGCATCCCGATGAGCTGCG
CCGCCACGAGCTGATCACAAACAGCGCCGTACCCATGCTCAACCGCTGGCCGTTCCAGAGCAAGGGCCAATCCAGCATGA
TCGCGGCCGAAGCCTGCTGGCGCTCGGACAGCACGGGCATCACCACCAAGCTCGCCCTGCACGGCCTGGGTATCTCGCGC
ATGGCCACCCTGGTGGCCGAGCCGCTGGTGCGCCAGGGCCTGCTGGTGCCGGTGCTGGCGGACTTCGTCGATGACCAGCC
CAGCCCCGTTTACGCGGTTACTCTTACCAGCCGCCACCGCCTGCCCAAAATCAGGGCCTGCATCGACCACTGGACCGAAT
GGTTTGAAAAAACCAGAACTACCCCATGA

Upstream 100 bases:

>100_bases
CACTTTAGGCAAGGGCTGCCCTCCGGGAAACGGCAGGCGGCGCAAATGGGTTTTGCATCCACTGCAAAGCCGCTGGAGGC
GTGCTGGTTACCATTGACCC

Downstream 100 bases:

>100_bases
CCACCATGAGCGATCCCCCCCCTCCGCCAGAGCCCCTCAACCCGCCCGGAACCCGGCCCAACGCCCGGTTTCTGCTGGCG
CATCCGGCGCATTTCATCGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRHLDFDDMHLFARVAELGTLSAVAREREVPVSQVSRTLARIEKACGARLIHRSTHGLAPTAEGETFLQYCRRIIGTLDE
LEGEFAQQTQQASGWVRVAASTVMAEYLLVPSLASLHQRHPRLCVEFQVEDRLVDMAHDGIDIAIRTGVPPTDTVVARQI
GALGRRLYATPGYLQAHGTPRHPDELRRHELITNSAVPMLNRWPFQSKGQSSMIAAEACWRSDSTGITTKLALHGLGISR
MATLVAEPLVRQGLLVPVLADFVDDQPSPVYAVTLTSRHRLPKIRACIDHWTEWFEKTRTTP

Sequences:

>Translated_302_residues
MRHLDFDDMHLFARVAELGTLSAVAREREVPVSQVSRTLARIEKACGARLIHRSTHGLAPTAEGETFLQYCRRIIGTLDE
LEGEFAQQTQQASGWVRVAASTVMAEYLLVPSLASLHQRHPRLCVEFQVEDRLVDMAHDGIDIAIRTGVPPTDTVVARQI
GALGRRLYATPGYLQAHGTPRHPDELRRHELITNSAVPMLNRWPFQSKGQSSMIAAEACWRSDSTGITTKLALHGLGISR
MATLVAEPLVRQGLLVPVLADFVDDQPSPVYAVTLTSRHRLPKIRACIDHWTEWFEKTRTTP
>Mature_302_residues
MRHLDFDDMHLFARVAELGTLSAVAREREVPVSQVSRTLARIEKACGARLIHRSTHGLAPTAEGETFLQYCRRIIGTLDE
LEGEFAQQTQQASGWVRVAASTVMAEYLLVPSLASLHQRHPRLCVEFQVEDRLVDMAHDGIDIAIRTGVPPTDTVVARQI
GALGRRLYATPGYLQAHGTPRHPDELRRHELITNSAVPMLNRWPFQSKGQSSMIAAEACWRSDSTGITTKLALHGLGISR
MATLVAEPLVRQGLLVPVLADFVDDQPSPVYAVTLTSRHRLPKIRACIDHWTEWFEKTRTTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693193, Length=267, Percent_Identity=32.9588014981273, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786401, Length=288, Percent_Identity=26.7361111111111, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789639, Length=288, Percent_Identity=26.0416666666667, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87081978, Length=299, Percent_Identity=27.7591973244147, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1789440, Length=296, Percent_Identity=24.6621621621622, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1787589, Length=271, Percent_Identity=22.8782287822878, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787128, Length=292, Percent_Identity=22.9452054794521, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33676; Mature: 33676

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLDFDDMHLFARVAELGTLSAVAREREVPVSQVSRTLARIEKACGARLIHRSTHGLAP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAEGETFLQYCRRIIGTLDELEGEFAQQTQQASGWVRVAASTVMAEYLLVPSLASLHQRH
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PRLCVEFQVEDRLVDMAHDGIDIAIRTGVPPTDTVVARQIGALGRRLYATPGYLQAHGTP
CCEEEEEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCC
RHPDELRRHELITNSAVPMLNRWPFQSKGQSSMIAAEACWRSDSTGITTKLALHGLGISR
CCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
MATLVAEPLVRQGLLVPVLADFVDDQPSPVYAVTLTSRHRLPKIRACIDHWTEWFEKTRT
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
TP
CC
>Mature Secondary Structure
MRHLDFDDMHLFARVAELGTLSAVAREREVPVSQVSRTLARIEKACGARLIHRSTHGLAP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TAEGETFLQYCRRIIGTLDELEGEFAQQTQQASGWVRVAASTVMAEYLLVPSLASLHQRH
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PRLCVEFQVEDRLVDMAHDGIDIAIRTGVPPTDTVVARQIGALGRRLYATPGYLQAHGTP
CCEEEEEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCC
RHPDELRRHELITNSAVPMLNRWPFQSKGQSSMIAAEACWRSDSTGITTKLALHGLGISR
CCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHH
MATLVAEPLVRQGLLVPVLADFVDDQPSPVYAVTLTSRHRLPKIRACIDHWTEWFEKTRT
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
TP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748036 [H]