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The map label for this gene is ygaD [H]

Identifier: 91790308

GI number: 91790308

Start: 4732155

End: 4732661

Strand: Direct

Name: ygaD [H]

Synonym: Bpro_4476

Alternate gene names: 91790308

Gene position: 4732155-4732661 (Clockwise)

Preceding gene: 91790307

Following gene: 91790309

Centisome position: 91.0

GC content: 62.92

Gene sequence:

>507_bases
GTGAGCAGCGAATTGCCATCAAAAGATGAGCCATCTACCCTGGCACTGGTTGGGCTGGTGGCCGATTTACTGCTGAAAAA
GCAATGGATGATGGCCACTGCCGAAAGCTGCACCGGCGGCATGATTTCCGCCGCGTGCACGGATCTTTCCGGCTCCAGCA
ACTGGTTTGAACGCGGCTTTGTGACTTATTCCGACGCCGCCAAAACCGAGTTGCTGGGGGTGGACGCGGCGCTGATCAAG
AAACACGGCGCCGTCAGCGACGAGGTAGCCCGCGCCATGGCGCAGGGCGCCATCGCCCACGCCAGGGCGCAGGTGGCCGT
GGCTGTGACGGGAGTTGCCGGGCCCACCGGCGGCAGCAAGGCCAAACCGGTGGGCACAGTCTGGTTTGGCTTTATGGTGG
GTGGCCAGCTCATCAGCGAAATGAAATGCTTTGACGGCGACCGCGCGGCGGTGCGCACAGCCACGCTGAAGCATGCCTTG
CAGCGGCTGGCGCAGTTGCTGGCTTGA

Upstream 100 bases:

>100_bases
ACTTCAAGGGCCTGGGTGCCCGTGGCGGCTTTGGCATCCTGTTCGACGACATCGTCGCCGCGTTCTGCACCCTGCTGGTG
ATTGCCCTCTGGAGATTCTG

Downstream 100 bases:

>100_bases
CCCCGACAAGGACGGGACGGCGGCGCCGGGTCGCCTGTGCTGTCAGGTTTATCCCAACTCCCTGCAGGTAATTCTTGCTC
TGCGCAAACCCCGACGGCAT

Product: CinA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSSELPSKDEPSTLALVGLVADLLLKKQWMMATAESCTGGMISAACTDLSGSSNWFERGFVTYSDAAKTELLGVDAALIK
KHGAVSDEVARAMAQGAIAHARAQVAVAVTGVAGPTGGSKAKPVGTVWFGFMVGGQLISEMKCFDGDRAAVRTATLKHAL
QRLAQLLA

Sequences:

>Translated_168_residues
MSSELPSKDEPSTLALVGLVADLLLKKQWMMATAESCTGGMISAACTDLSGSSNWFERGFVTYSDAAKTELLGVDAALIK
KHGAVSDEVARAMAQGAIAHARAQVAVAVTGVAGPTGGSKAKPVGTVWFGFMVGGQLISEMKCFDGDRAAVRTATLKHAL
QRLAQLLA
>Mature_167_residues
SSELPSKDEPSTLALVGLVADLLLKKQWMMATAESCTGGMISAACTDLSGSSNWFERGFVTYSDAAKTELLGVDAALIKK
HGAVSDEVARAMAQGAIAHARAQVAVAVTGVAGPTGGSKAKPVGTVWFGFMVGGQLISEMKCFDGDRAAVRTATLKHALQ
RLAQLLA

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=136, Percent_Identity=53.6764705882353, Blast_Score=147, Evalue=3e-37,
Organism=Escherichia coli, GI1787818, Length=139, Percent_Identity=38.1294964028777, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17398; Mature: 17267

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSELPSKDEPSTLALVGLVADLLLKKQWMMATAESCTGGMISAACTDLSGSSNWFERGF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCC
VTYSDAAKTELLGVDAALIKKHGAVSDEVARAMAQGAIAHARAQVAVAVTGVAGPTGGSK
EEECCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC
AKPVGTVWFGFMVGGQLISEMKCFDGDRAAVRTATLKHALQRLAQLLA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSELPSKDEPSTLALVGLVADLLLKKQWMMATAESCTGGMISAACTDLSGSSNWFERGF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHCCC
VTYSDAAKTELLGVDAALIKKHGAVSDEVARAMAQGAIAHARAQVAVAVTGVAGPTGGSK
EEECCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC
AKPVGTVWFGFMVGGQLISEMKCFDGDRAAVRTATLKHALQRLAQLLA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]