Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790268

Identifier: 91790268

GI number: 91790268

Start: 4683870

End: 4684514

Strand: Reverse

Name: 91790268

Synonym: Bpro_4435

Alternate gene names: NA

Gene position: 4684514-4683870 (Counterclockwise)

Preceding gene: 91790269

Following gene: 91790267

Centisome position: 90.08

GC content: 65.58

Gene sequence:

>645_bases
TTGAAAAACGCAACCCTTAGCACCGTTGCGCGCTTCCTGCTGGGTTTTTGCCTGTGCGCGCTGCTGGCCTGCGGGGCAGG
GGCGGCGTCGGCCACCGAGATATCCCAACTGCGCGTCGAACGCGCCGATAACGGCATCCACCTGTCGGCGCTGGTCCGGT
TTGACATACCACCGGTGGTGGAAGACGCCCTGCTCAAGGGTATCCCGATGTTTTTTGTGCTCGAGGCCGACATCTACCGT
GATCGCTGGTACTGGACGGATCCGCGGGTGGCCAGCGCTGCCCGCACCATACGCCTGGCCTACCAGCCCCTGACCCGGCG
CTGGCGCGTCAACATGGCTTCGGGCCTGATCAGCAACTCGGCCGGCCTGCGCGCTACGCTGAACCAGAACTACGACACCC
TGCCCGAAGCCCTGTCGGCCATCCAGCGCGTGGCCCGCTGGAAAATCGCCGAGACCTCCGATGTCGATCTCGATGCCACG
CACAAGCTCGAATTCAGCTTCCGGCTCGACCTGTCGCAGCTGCCACGCCCCTTCCAGATCGGCGTGGCCGGCCAACGCGA
GTGGGCTGTTTCCGCGCAACTCAAGGAAAGGCTGAGGCTGGAGCCGGCGGCACCCGCAGCCGGCAGCACCGAGGTCGCCA
AGTGA

Upstream 100 bases:

>100_bases
ATGCCATCGCCAGGGCATTTGCTGCCCCAAAGTGGGGCCGAAGCGACAGTCTTCCCGGACAATTTGATGCGTGAGCACGA
CGGTTTTTATTACGCCATTC

Downstream 100 bases:

>100_bases
GCGGTCCGCGCAACGTGGATTCGATCAAAAGCAGCAAGGCCTTCCGCTGGACCGTGGGCGTGGGTGTGGGAACCATGGCC
GCCCTCGGTTTGGTGTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKNATLSTVARFLLGFCLCALLACGAGAASATEISQLRVERADNGIHLSALVRFDIPPVVEDALLKGIPMFFVLEADIYR
DRWYWTDPRVASAARTIRLAYQPLTRRWRVNMASGLISNSAGLRATLNQNYDTLPEALSAIQRVARWKIAETSDVDLDAT
HKLEFSFRLDLSQLPRPFQIGVAGQREWAVSAQLKERLRLEPAAPAAGSTEVAK

Sequences:

>Translated_214_residues
MKNATLSTVARFLLGFCLCALLACGAGAASATEISQLRVERADNGIHLSALVRFDIPPVVEDALLKGIPMFFVLEADIYR
DRWYWTDPRVASAARTIRLAYQPLTRRWRVNMASGLISNSAGLRATLNQNYDTLPEALSAIQRVARWKIAETSDVDLDAT
HKLEFSFRLDLSQLPRPFQIGVAGQREWAVSAQLKERLRLEPAAPAAGSTEVAK
>Mature_214_residues
MKNATLSTVARFLLGFCLCALLACGAGAASATEISQLRVERADNGIHLSALVRFDIPPVVEDALLKGIPMFFVLEADIYR
DRWYWTDPRVASAARTIRLAYQPLTRRWRVNMASGLISNSAGLRATLNQNYDTLPEALSAIQRVARWKIAETSDVDLDAT
HKLEFSFRLDLSQLPRPFQIGVAGQREWAVSAQLKERLRLEPAAPAAGSTEVAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23668; Mature: 23668

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNATLSTVARFLLGFCLCALLACGAGAASATEISQLRVERADNGIHLSALVRFDIPPVV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHH
EDALLKGIPMFFVLEADIYRDRWYWTDPRVASAARTIRLAYQPLTRRWRVNMASGLISNS
HHHHHCCCCEEEEEEEEHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGLRATLNQNYDTLPEALSAIQRVARWKIAETSDVDLDATHKLEFSFRLDLSQLPRPFQI
CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECHHHCCCCEEE
GVAGQREWAVSAQLKERLRLEPAAPAAGSTEVAK
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNATLSTVARFLLGFCLCALLACGAGAASATEISQLRVERADNGIHLSALVRFDIPPVV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHH
EDALLKGIPMFFVLEADIYRDRWYWTDPRVASAARTIRLAYQPLTRRWRVNMASGLISNS
HHHHHCCCCEEEEEEEEHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGLRATLNQNYDTLPEALSAIQRVARWKIAETSDVDLDATHKLEFSFRLDLSQLPRPFQI
CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECHHHCCCCEEE
GVAGQREWAVSAQLKERLRLEPAAPAAGSTEVAK
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA