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The map label for this gene is ntrY [H]

Identifier: 91790267

GI number: 91790267

Start: 4681576

End: 4683873

Strand: Reverse

Name: ntrY [H]

Synonym: Bpro_4434

Alternate gene names: 91790267

Gene position: 4683873-4681576 (Counterclockwise)

Preceding gene: 91790268

Following gene: 91790266

Centisome position: 90.07

GC content: 64.75

Gene sequence:

>2298_bases
GTGAGCGGTCCGCGCAACGTGGATTCGATCAAAAGCAGCAAGGCCTTCCGCTGGACCGTGGGCGTGGGTGTGGGAACCAT
GGCCGCCCTCGGTTTGGTGTTGATGTTCCTGCTGACCCAGGCCACCGGCAATCGCGAGCTCTACGAACGCAATTACGCGC
TGCTTTTTGTCCTGAACGTGGCCGTGGCCGTGCTGCTGCTGCTGGTGATCGGCTGGATCGTGCTGCGCCTGGCGCTGCGG
CTGCACCGTGGCCGTTTCGGCAGCCGCCTGCTCGTCAAGCTGGCGGCCATCTTCGCGCTGGTGGGCCTGCTGCCTGGCCT
GATGATTTATGTTGTGTCCTACCAGTTCGTGTCCCGTTCCATCGAGAGCTGGTTTGACGTGGAGGTCGAAGGGGCGCTGG
CGGCCGGCCTGAACCTGGGCCGTGTCACGCTGGACACCCTGGCGGCCGACCTGGCCAACAAGACGAAGCAGGCCGCCACG
CAACTGTCAGAAACCCCCGATGCCATGGCCGGCCTGGCGCTGGAGCGCCTGCGTGACCAGCTCACGGCCAGCGATGTGGT
GCTCTGGAGCGCGTCAGGCCAGGTGATTGCGAGTGCCGGCGAATCGCGTTTTTTGCTCAAGCCGGAACGCCCCTCGGCGC
AGCAACTGCGCAGCGCGCGCACCCTGCGCGTCATCACCCAGATCGAAGGCCTGGACGAGGTGTCCCCCGGCGGCACCGGT
GAGCTGGCCGGCAGCGGGGCGGCCAGTGCCGGCGCGGCGGCAGCGGCGGCCAATACGCCGCCGCGCGTCAAGGCCATCGC
CGTGGTCAACAACCCGAATGTCAACGTACTGGGAGAGTCGCGCTTTTTGCAGGTGACCGAGGTATTGCCCGCGAGCCTGG
TGGCCAACGCCATTGCCGTGCAGGAGGCCAACCGCGAATACCAGGAGCGCGCACTGGCGCGCAGCGGGCTGCGCAAGATG
TATATCGGCACCCTCACGCTCAGCCTCTTTCTGGCGGTGTTTGGTGCCGTACTGCTGGCGGTCTTGCTGGGCAACCAGCT
GGCCAAGCCGCTGCTGGTGCTGGCCGAAGGCGTGAGGCAGGTCGCCCAGGGCGACCTGACACCCAAGGCCGCGCTGCAGG
GCAAGGACGAACTCGGCGGCCTGACCCGTTCATTTGCCGACATGACGCAGCAGCTGGCCGATGCCCGCTCTGCGGTGCAG
CAAAGCATGAACCAGGTCGACGCCGCGCGCGCCAACCTGCAAACCATCCTGGACAACCTCACCGCGGGCGTGATCGTGCT
CGACGTGCGCGGCCGCATCCAGTCCAGCAACCCGGGCGTGACCCGCATCCTGCGCGCGCCGCTGGCCGTCTACCACGGCA
AGTCCCTCGGCGAAGTGCCGGGCCTGGAGGTGTTCGCCAAGGACGTGCTGGCCCAGTTTGCCGACTACCTCAACAACAAC
GCACCGCATGGGCTGGAGCATTGGCAGCAATCGTTTGAACTCAAGGCCGCCGTGCCCGGTGCGCCCGACAACGCCATCAC
CCTGATTGCACGCGGCGCCAAGATGCCCGGCACCGAAGAGTTTTTGCTGGTGTTCGACGACATCTCCGAAATGGTGTCGG
CCCAGCGCGCGCAAGCCTGGGGCGAAGTCGCACGCCGGCTGGCGCATGAAATCAAGAACCCCCTCACGCCCATCCAGCTG
TCGGCCGAGCGCCTTGAAATGAAGCTCACGGGCAAGGTCGGTGAGACGGAGCAGGCGCTGCTGACCAAATCCGTCAAGAC
CATCGTGGACCAGGTGGACGCCATGAAGCGCCTCGTCAACGAGTTTCGCGACTACGCCCGCCTGCCCGCCGCTGAACTCA
AGCCCATAGACCTCAATGCGCTGGTCAACGATGTGATCCAGCTGTACGTCGGCGAGAACGCGGTGGTGCCCGTTTATGCC
GAGCTGGATCCCAAGGCCCCGCTGATTCAGGGTGACGGCCAGCAGCTGCGCCAGGTCATTCACAACCTGCTGCAAAACGC
GCAGGACGCACAGGAAGGCAGGCCGGATGGCCGTGTCACCCTGAAAACCGAATACTCCGACACCTCGAAGCGTGTGCGCC
TGAGCGTGCGCGACAACGGCACCGGCTTTCCCGAGTACATCCTCGAGCGGGCGTTTGAGCCCTACGTGACCACCAAGGTC
AAAGGCACTGGCCTGGGTCTTGCTGTTGTCAAAAAGATTGCAGATGAACACGGCGCGCGCATCGATATTTCCAACCGTGT
GGTGGACGGTGTGGTGCAAGGGGCACAAGTGTCGTTATCATTTGCAGTTGTGGTTTAA

Upstream 100 bases:

>100_bases
GCGTGGCCGGCCAACGCGAGTGGGCTGTTTCCGCGCAACTCAAGGAAAGGCTGAGGCTGGAGCCGGCGGCACCCGCAGCC
GGCAGCACCGAGGTCGCCAA

Downstream 100 bases:

>100_bases
CAACACATTCAGTAACACATTCAACGACACTCCGCATCGGCAACAACTGGCAGGGCAGCAATTCAATCATGGCAAATATT
CTGGTGGTCGACGACGAGCT

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 764

Protein sequence:

>765_residues
MSGPRNVDSIKSSKAFRWTVGVGVGTMAALGLVLMFLLTQATGNRELYERNYALLFVLNVAVAVLLLLVIGWIVLRLALR
LHRGRFGSRLLVKLAAIFALVGLLPGLMIYVVSYQFVSRSIESWFDVEVEGALAAGLNLGRVTLDTLAADLANKTKQAAT
QLSETPDAMAGLALERLRDQLTASDVVLWSASGQVIASAGESRFLLKPERPSAQQLRSARTLRVITQIEGLDEVSPGGTG
ELAGSGAASAGAAAAAANTPPRVKAIAVVNNPNVNVLGESRFLQVTEVLPASLVANAIAVQEANREYQERALARSGLRKM
YIGTLTLSLFLAVFGAVLLAVLLGNQLAKPLLVLAEGVRQVAQGDLTPKAALQGKDELGGLTRSFADMTQQLADARSAVQ
QSMNQVDAARANLQTILDNLTAGVIVLDVRGRIQSSNPGVTRILRAPLAVYHGKSLGEVPGLEVFAKDVLAQFADYLNNN
APHGLEHWQQSFELKAAVPGAPDNAITLIARGAKMPGTEEFLLVFDDISEMVSAQRAQAWGEVARRLAHEIKNPLTPIQL
SAERLEMKLTGKVGETEQALLTKSVKTIVDQVDAMKRLVNEFRDYARLPAAELKPIDLNALVNDVIQLYVGENAVVPVYA
ELDPKAPLIQGDGQQLRQVIHNLLQNAQDAQEGRPDGRVTLKTEYSDTSKRVRLSVRDNGTGFPEYILERAFEPYVTTKV
KGTGLGLAVVKKIADEHGARIDISNRVVDGVVQGAQVSLSFAVVV

Sequences:

>Translated_765_residues
MSGPRNVDSIKSSKAFRWTVGVGVGTMAALGLVLMFLLTQATGNRELYERNYALLFVLNVAVAVLLLLVIGWIVLRLALR
LHRGRFGSRLLVKLAAIFALVGLLPGLMIYVVSYQFVSRSIESWFDVEVEGALAAGLNLGRVTLDTLAADLANKTKQAAT
QLSETPDAMAGLALERLRDQLTASDVVLWSASGQVIASAGESRFLLKPERPSAQQLRSARTLRVITQIEGLDEVSPGGTG
ELAGSGAASAGAAAAAANTPPRVKAIAVVNNPNVNVLGESRFLQVTEVLPASLVANAIAVQEANREYQERALARSGLRKM
YIGTLTLSLFLAVFGAVLLAVLLGNQLAKPLLVLAEGVRQVAQGDLTPKAALQGKDELGGLTRSFADMTQQLADARSAVQ
QSMNQVDAARANLQTILDNLTAGVIVLDVRGRIQSSNPGVTRILRAPLAVYHGKSLGEVPGLEVFAKDVLAQFADYLNNN
APHGLEHWQQSFELKAAVPGAPDNAITLIARGAKMPGTEEFLLVFDDISEMVSAQRAQAWGEVARRLAHEIKNPLTPIQL
SAERLEMKLTGKVGETEQALLTKSVKTIVDQVDAMKRLVNEFRDYARLPAAELKPIDLNALVNDVIQLYVGENAVVPVYA
ELDPKAPLIQGDGQQLRQVIHNLLQNAQDAQEGRPDGRVTLKTEYSDTSKRVRLSVRDNGTGFPEYILERAFEPYVTTKV
KGTGLGLAVVKKIADEHGARIDISNRVVDGVVQGAQVSLSFAVVV
>Mature_764_residues
SGPRNVDSIKSSKAFRWTVGVGVGTMAALGLVLMFLLTQATGNRELYERNYALLFVLNVAVAVLLLLVIGWIVLRLALRL
HRGRFGSRLLVKLAAIFALVGLLPGLMIYVVSYQFVSRSIESWFDVEVEGALAAGLNLGRVTLDTLAADLANKTKQAATQ
LSETPDAMAGLALERLRDQLTASDVVLWSASGQVIASAGESRFLLKPERPSAQQLRSARTLRVITQIEGLDEVSPGGTGE
LAGSGAASAGAAAAAANTPPRVKAIAVVNNPNVNVLGESRFLQVTEVLPASLVANAIAVQEANREYQERALARSGLRKMY
IGTLTLSLFLAVFGAVLLAVLLGNQLAKPLLVLAEGVRQVAQGDLTPKAALQGKDELGGLTRSFADMTQQLADARSAVQQ
SMNQVDAARANLQTILDNLTAGVIVLDVRGRIQSSNPGVTRILRAPLAVYHGKSLGEVPGLEVFAKDVLAQFADYLNNNA
PHGLEHWQQSFELKAAVPGAPDNAITLIARGAKMPGTEEFLLVFDDISEMVSAQRAQAWGEVARRLAHEIKNPLTPIQLS
AERLEMKLTGKVGETEQALLTKSVKTIVDQVDAMKRLVNEFRDYARLPAAELKPIDLNALVNDVIQLYVGENAVVPVYAE
LDPKAPLIQGDGQQLRQVIHNLLQNAQDAQEGRPDGRVTLKTEYSDTSKRVRLSVRDNGTGFPEYILERAFEPYVTTKVK
GTGLGLAVVKKIADEHGARIDISNRVVDGVVQGAQVSLSFAVVV

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=414, Percent_Identity=26.3285024154589, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=32.4324324324324, Blast_Score=97, Evalue=5e-21,
Organism=Escherichia coli, GI1790300, Length=354, Percent_Identity=26.5536723163842, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1789149, Length=240, Percent_Identity=23.75, Blast_Score=67, Evalue=6e-12,
Organism=Escherichia coli, GI48994928, Length=214, Percent_Identity=27.1028037383178, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786600, Length=253, Percent_Identity=28.4584980237154, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 82153; Mature: 82022

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPRNVDSIKSSKAFRWTVGVGVGTMAALGLVLMFLLTQATGNRELYERNYALLFVLNV
CCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
AVAVLLLLVIGWIVLRLALRLHRGRFGSRLLVKLAAIFALVGLLPGLMIYVVSYQFVSRS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IESWFDVEVEGALAAGLNLGRVTLDTLAADLANKTKQAATQLSETPDAMAGLALERLRDQ
HHHHHCEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LTASDVVLWSASGQVIASAGESRFLLKPERPSAQQLRSARTLRVITQIEGLDEVSPGGTG
HCCCCEEEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ELAGSGAASAGAAAAAANTPPRVKAIAVVNNPNVNVLGESRFLQVTEVLPASLVANAIAV
CCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHH
QEANREYQERALARSGLRKMYIGTLTLSLFLAVFGAVLLAVLLGNQLAKPLLVLAEGVRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQGDLTPKAALQGKDELGGLTRSFADMTQQLADARSAVQQSMNQVDAARANLQTILDNL
HHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGVIVLDVRGRIQSSNPGVTRILRAPLAVYHGKSLGEVPGLEVFAKDVLAQFADYLNNN
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
APHGLEHWQQSFELKAAVPGAPDNAITLIARGAKMPGTEEFLLVFDDISEMVSAQRAQAW
CCCHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCCCHHEEEHHHHHHHHHHHHHHHH
GEVARRLAHEIKNPLTPIQLSAERLEMKLTGKVGETEQALLTKSVKTIVDQVDAMKRLVN
HHHHHHHHHHHHCCCCCCEECHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFRDYARLPAAELKPIDLNALVNDVIQLYVGENAVVPVYAELDPKAPLIQGDGQQLRQVI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
HNLLQNAQDAQEGRPDGRVTLKTEYSDTSKRVRLSVRDNGTGFPEYILERAFEPYVTTKV
HHHHHCCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEE
KGTGLGLAVVKKIADEHGARIDISNRVVDGVVQGAQVSLSFAVVV
CCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEEEEEEC
>Mature Secondary Structure 
SGPRNVDSIKSSKAFRWTVGVGVGTMAALGLVLMFLLTQATGNRELYERNYALLFVLNV
CCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
AVAVLLLLVIGWIVLRLALRLHRGRFGSRLLVKLAAIFALVGLLPGLMIYVVSYQFVSRS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IESWFDVEVEGALAAGLNLGRVTLDTLAADLANKTKQAATQLSETPDAMAGLALERLRDQ
HHHHHCEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LTASDVVLWSASGQVIASAGESRFLLKPERPSAQQLRSARTLRVITQIEGLDEVSPGGTG
HCCCCEEEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ELAGSGAASAGAAAAAANTPPRVKAIAVVNNPNVNVLGESRFLQVTEVLPASLVANAIAV
CCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHH
QEANREYQERALARSGLRKMYIGTLTLSLFLAVFGAVLLAVLLGNQLAKPLLVLAEGVRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQGDLTPKAALQGKDELGGLTRSFADMTQQLADARSAVQQSMNQVDAARANLQTILDNL
HHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGVIVLDVRGRIQSSNPGVTRILRAPLAVYHGKSLGEVPGLEVFAKDVLAQFADYLNNN
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
APHGLEHWQQSFELKAAVPGAPDNAITLIARGAKMPGTEEFLLVFDDISEMVSAQRAQAW
CCCHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCCCHHEEEHHHHHHHHHHHHHHHH
GEVARRLAHEIKNPLTPIQLSAERLEMKLTGKVGETEQALLTKSVKTIVDQVDAMKRLVN
HHHHHHHHHHHHCCCCCCEECHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFRDYARLPAAELKPIDLNALVNDVIQLYVGENAVVPVYAELDPKAPLIQGDGQQLRQVI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
HNLLQNAQDAQEGRPDGRVTLKTEYSDTSKRVRLSVRDNGTGFPEYILERAFEPYVTTKV
HHHHHCCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEEE
KGTGLGLAVVKKIADEHGARIDISNRVVDGVVQGAQVSLSFAVVV
CCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]