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The map label for this gene is atoC [C]

Identifier: 91790266

GI number: 91790266

Start: 4680830

End: 4681507

Strand: Reverse

Name: atoC [C]

Synonym: Bpro_4433

Alternate gene names: 91790266

Gene position: 4681507-4680830 (Counterclockwise)

Preceding gene: 91790267

Following gene: 91790262

Centisome position: 90.02

GC content: 59.73

Gene sequence:

>678_bases
ATGGCAAATATTCTGGTGGTCGACGACGAGCTGGGCATACGCGACCTTCTCTCGGAAATTCTCAATGACGAAGGGCATCA
AGTCGAACTGGCTGAAAACGCAGCACAGGCTCGCGCCGCCCGTTCGCGCACCCGGCCCGACCTGGTGTTGCTCGACATCT
GGATGCCCGACACCGATGGCGTGACGCTGCTCAAGGAGTGGTCGTCCAGCGGCCTGCTCAGCATGCCCGTCATCATGATG
AGCGGCCACGCCACCATAGACACTGCGGTAGAGGCCACCAAGATCGGTGCCATGGCGTTTCTTGAAAAACCCATCACCCT
GCAAAAACTGCTCAAGGCCGTGGAGCAGGGCCTCACCAAAACTGCGGCCCGCAAGCCCACCGTGCTGAACCACGCGACCG
TGCATTCGGTGGACCTCACGGTAGAAACCGTCATGACGGGCGGCATCTTGCCCGTACCGATTGACCTGGGGCCGCAGGCC
ACACAAAGCTTCCTGCTTGAAAAACCGCTGCGCGATGCGCGTGACGAGTTTGAAAAAGCCTACTTTGAATTTCATCTCGC
CAAAGAGGGCGGCTCCATGACCCGCGTGGCCGAGAAAACAGGTCTGGAACGCACCCATCTCTACCGCAAGCTGAAGCAAT
TGGGCGTCGATCTCACACGCGGCAAGCGCGCCGGTTGA

Upstream 100 bases:

>100_bases
AAGTGTCGTTATCATTTGCAGTTGTGGTTTAACAACACATTCAGTAACACATTCAACGACACTCCGCATCGGCAACAACT
GGCAGGGCAGCAATTCAATC

Downstream 100 bases:

>100_bases
GTAGCAGGCCAGCGGCTTTTTAGGGGTGCCCGCGGCTGATATATAATCTTAGGCTCAGGCCCGGTAGCTCAGTCGGTAGA
GCAGAGGATTGAAAATCCTT

Product: two component Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MANILVVDDELGIRDLLSEILNDEGHQVELAENAAQARAARSRTRPDLVLLDIWMPDTDGVTLLKEWSSSGLLSMPVIMM
SGHATIDTAVEATKIGAMAFLEKPITLQKLLKAVEQGLTKTAARKPTVLNHATVHSVDLTVETVMTGGILPVPIDLGPQA
TQSFLLEKPLRDARDEFEKAYFEFHLAKEGGSMTRVAEKTGLERTHLYRKLKQLGVDLTRGKRAG

Sequences:

>Translated_225_residues
MANILVVDDELGIRDLLSEILNDEGHQVELAENAAQARAARSRTRPDLVLLDIWMPDTDGVTLLKEWSSSGLLSMPVIMM
SGHATIDTAVEATKIGAMAFLEKPITLQKLLKAVEQGLTKTAARKPTVLNHATVHSVDLTVETVMTGGILPVPIDLGPQA
TQSFLLEKPLRDARDEFEKAYFEFHLAKEGGSMTRVAEKTGLERTHLYRKLKQLGVDLTRGKRAG
>Mature_224_residues
ANILVVDDELGIRDLLSEILNDEGHQVELAENAAQARAARSRTRPDLVLLDIWMPDTDGVTLLKEWSSSGLLSMPVIMMS
GHATIDTAVEATKIGAMAFLEKPITLQKLLKAVEQGLTKTAARKPTVLNHATVHSVDLTVETVMTGGILPVPIDLGPQAT
QSFLLEKPLRDARDEFEKAYFEFHLAKEGGSMTRVAEKTGLERTHLYRKLKQLGVDLTRGKRAG

Specific function: Member of the two-component regulatory system RBE_0312/RBE_0470 [H]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=37.7049180327869, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=36.1344537815126, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=35.3448275862069, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787375, Length=127, Percent_Identity=26.7716535433071, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788905, Length=121, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1786911, Length=151, Percent_Identity=29.8013245033113, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1789809, Length=123, Percent_Identity=30.8943089430894, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786599, Length=174, Percent_Identity=27.5862068965517, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 24678; Mature: 24547

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANILVVDDELGIRDLLSEILNDEGHQVELAENAAQARAARSRTRPDLVLLDIWMPDTDG
CCCEEEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
VTLLKEWSSSGLLSMPVIMMSGHATIDTAVEATKIGAMAFLEKPITLQKLLKAVEQGLTK
HHHHHHHCCCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAARKPTVLNHATVHSVDLTVETVMTGGILPVPIDLGPQATQSFLLEKPLRDARDEFEKA
HHHCCCCEECCCEEEEEHEEHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
YFEFHLAKEGGSMTRVAEKTGLERTHLYRKLKQLGVDLTRGKRAG
HHHEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANILVVDDELGIRDLLSEILNDEGHQVELAENAAQARAARSRTRPDLVLLDIWMPDTDG
CCEEEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
VTLLKEWSSSGLLSMPVIMMSGHATIDTAVEATKIGAMAFLEKPITLQKLLKAVEQGLTK
HHHHHHHCCCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAARKPTVLNHATVHSVDLTVETVMTGGILPVPIDLGPQATQSFLLEKPLRDARDEFEKA
HHHCCCCEECCCEEEEEHEEHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
YFEFHLAKEGGSMTRVAEKTGLERTHLYRKLKQLGVDLTRGKRAG
HHHEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA