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The map label for this gene is dppB [C]

Identifier: 91790238

GI number: 91790238

Start: 4648454

End: 4649431

Strand: Reverse

Name: dppB [C]

Synonym: Bpro_4405

Alternate gene names: 91790238

Gene position: 4649431-4648454 (Counterclockwise)

Preceding gene: 91790239

Following gene: 91790237

Centisome position: 89.41

GC content: 58.79

Gene sequence:

>978_bases
ATGACTGCGTATATCCTGCGCCGTCTCTTGTCGGCATTGCTCACGCTATTGGGCGTGGCGGTGATTCTCTTCGTGCTGTT
CCGGATGATGCCGGGTGATCCAACTGCGCAGATCATCAGCCCCGCCCTCGATGCGGCAGCTCAGGACCGCCTCAAGCAGG
CGTTTGGTTTGGATCTTCCGGTGTGGCAACAATTCATCATATACCTGAAGAACACGGCAACGCTTGAGTGGGGCCGGTCC
TTCACCACCGGCCAGCCGGTCGCTAGTTTGCTAGGGGGCTGGCTGGTCAATACGCTGCTGTTGATGAGCACCGGACTTGT
CTTGGCGATTTCTCTAGGCGTTGTGCTTGGCATTTTTATGGCGGCACGTCGCGGCGGCCCCCTCGATAACGGCGCCACCG
TTCTGGGGCTCGTTTTTCAGGCCTCACCGCCCTTCGTGATCGGGATCCTACTGCTTATGGGGCTGAGCTATCAGTTCGAG
ATTTTCCCGTCAGGAGGGATGTTCACGCCTGGCGCCGACCCAGGTAACACCTGGGCGCTCATCACTTCGAAGGATTTTCT
AGAACACCTGGTCCTGCCAACGCTCACGATCACCGCGCTCTATTTGTCCACGCCGATGCTGGTGATGCGCGATTCGATGC
TCGAGGTGCTGGGTTCGGATTTCGTCGAATTCGCCCGTGCGAAGGGGCTGAGTCCGGTCCGTGTGCTGTTTCGCCACGCT
GCGCGCAACGCTCTGTTGGCGGTGGTCACGGTTTCTTCGCTGATCCTGGGCTTTGCAATCGGCGGACAGATCGTGATCGA
GACCGTCTTCTCGTGGCCGGGGATGGGCAAGGCCATGGTCGACGCCGCAATGCAACACGACTACCCGGTCGCTCAGGCGG
CATTCTTCCTAATGGCAGCAGTAGTGATTGGTTTGAACTTCATCACCGATCTCTCCTATAGCCTCCTCGACCCACGCATC
CGGCTTGGAACCACATGA

Upstream 100 bases:

>100_bases
GCGCAAGGCAAATTGCTCTCTCCCCGCGGCAAATGATCTACGGTGCATTGTGGGCGGATGACGCCCCTACTCGAAACCGC
GGCCATCAGGGAGGCTCGCG

Downstream 100 bases:

>100_bases
CGACCGAAAGAAACAGAATGGCAGAAAGACTCAGTACCGTGGCGATGGCGCCGGTGATCGCAGCAGAGGTGTTCGAAATT
GAAGCTGCGTTCGTTACGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTAYILRRLLSALLTLLGVAVILFVLFRMMPGDPTAQIISPALDAAAQDRLKQAFGLDLPVWQQFIIYLKNTATLEWGRS
FTTGQPVASLLGGWLVNTLLLMSTGLVLAISLGVVLGIFMAARRGGPLDNGATVLGLVFQASPPFVIGILLLMGLSYQFE
IFPSGGMFTPGADPGNTWALITSKDFLEHLVLPTLTITALYLSTPMLVMRDSMLEVLGSDFVEFARAKGLSPVRVLFRHA
ARNALLAVVTVSSLILGFAIGGQIVIETVFSWPGMGKAMVDAAMQHDYPVAQAAFFLMAAVVIGLNFITDLSYSLLDPRI
RLGTT

Sequences:

>Translated_325_residues
MTAYILRRLLSALLTLLGVAVILFVLFRMMPGDPTAQIISPALDAAAQDRLKQAFGLDLPVWQQFIIYLKNTATLEWGRS
FTTGQPVASLLGGWLVNTLLLMSTGLVLAISLGVVLGIFMAARRGGPLDNGATVLGLVFQASPPFVIGILLLMGLSYQFE
IFPSGGMFTPGADPGNTWALITSKDFLEHLVLPTLTITALYLSTPMLVMRDSMLEVLGSDFVEFARAKGLSPVRVLFRHA
ARNALLAVVTVSSLILGFAIGGQIVIETVFSWPGMGKAMVDAAMQHDYPVAQAAFFLMAAVVIGLNFITDLSYSLLDPRI
RLGTT
>Mature_324_residues
TAYILRRLLSALLTLLGVAVILFVLFRMMPGDPTAQIISPALDAAAQDRLKQAFGLDLPVWQQFIIYLKNTATLEWGRSF
TTGQPVASLLGGWLVNTLLLMSTGLVLAISLGVVLGIFMAARRGGPLDNGATVLGLVFQASPPFVIGILLLMGLSYQFEI
FPSGGMFTPGADPGNTWALITSKDFLEHLVLPTLTITALYLSTPMLVMRDSMLEVLGSDFVEFARAKGLSPVRVLFRHAA
RNALLAVVTVSSLILGFAIGGQIVIETVFSWPGMGKAMVDAAMQHDYPVAQAAFFLMAAVVIGLNFITDLSYSLLDPRIR
LGTT

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=340, Percent_Identity=34.7058823529412, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787053, Length=321, Percent_Identity=34.8909657320872, Blast_Score=188, Evalue=5e-49,
Organism=Escherichia coli, GI1789888, Length=326, Percent_Identity=32.2085889570552, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787497, Length=324, Percent_Identity=31.4814814814815, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1787761, Length=335, Percent_Identity=31.3432835820896, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=27.1978021978022, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787550, Length=272, Percent_Identity=26.1029411764706, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34964; Mature: 34833

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYILRRLLSALLTLLGVAVILFVLFRMMPGDPTAQIISPALDAAAQDRLKQAFGLDLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
VWQQFIIYLKNTATLEWGRSFTTGQPVASLLGGWLVNTLLLMSTGLVLAISLGVVLGIFM
HHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARRGGPLDNGATVLGLVFQASPPFVIGILLLMGLSYQFEIFPSGGMFTPGADPGNTWAL
HHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCEEEE
ITSKDFLEHLVLPTLTITALYLSTPMLVMRDSMLEVLGSDFVEFARAKGLSPVRVLFRHA
EECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ARNALLAVVTVSSLILGFAIGGQIVIETVFSWPGMGKAMVDAAMQHDYPVAQAAFFLMAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
VVIGLNFITDLSYSLLDPRIRLGTT
HHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
TAYILRRLLSALLTLLGVAVILFVLFRMMPGDPTAQIISPALDAAAQDRLKQAFGLDLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
VWQQFIIYLKNTATLEWGRSFTTGQPVASLLGGWLVNTLLLMSTGLVLAISLGVVLGIFM
HHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARRGGPLDNGATVLGLVFQASPPFVIGILLLMGLSYQFEIFPSGGMFTPGADPGNTWAL
HHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCEEEE
ITSKDFLEHLVLPTLTITALYLSTPMLVMRDSMLEVLGSDFVEFARAKGLSPVRVLFRHA
EECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ARNALLAVVTVSSLILGFAIGGQIVIETVFSWPGMGKAMVDAAMQHDYPVAQAAFFLMAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
VVIGLNFITDLSYSLLDPRIRLGTT
HHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA