Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790222

Identifier: 91790222

GI number: 91790222

Start: 4630570

End: 4631688

Strand: Reverse

Name: 91790222

Synonym: Bpro_4388

Alternate gene names: NA

Gene position: 4631688-4630570 (Counterclockwise)

Preceding gene: 91790223

Following gene: 91790220

Centisome position: 89.07

GC content: 54.6

Gene sequence:

>1119_bases
ATGAAAATGAATCCAAGCTTAGTTCTCATTCTTTCCCTGCTAGGGATGCCACTAGCGCATGCTGTTGAAGTTGTTGTCGG
GCAGGTCGGTCCGATGTCAGGCTTGGATGCCAATCAAGGCAGGGCATATGCGGTTGGTATGCAGCTGATGTTTAACAATG
TCAACAAGGCCGGCGGCATCAACGGCCACACGTTCGCCCTGGTTCGCAAAGATGATGGTGGGCGGGCGGAGGATACTATT
AGTGCCACCAAGCAGTTGCTGACTGAAGAAAAGCCATTGGTTTTGGCTGGATTTTTTGGCAACCGCAACATCACAGATTT
GGTGAGTTCAGGCGTGCTCGAAGCAAACTCCATCGCCGTCGTGGGCTACCGCACGACAGAAATGCGTCCCGAGACCCCGT
TGCTGTACAACGTGCGGGCCAGCTTACGTGACGAGATCCACAAAATTACCGAACACCTGGCCACTGTCGGTATCAACCGA
ATTGGCCTTTTTTACGAAGACGGTCCGGGTGTTGCCTCGCTGCTTGCTGCCACCGACGAAGCAGTCAAGAAGACTCGCGG
CAATGTCATTTCCAAAGCATCCTATCCAGCTGGGACGGCTCGCGTTACGCCGGCTGTTGAGGTGTTCGTTAAAACCACAC
CGCAGGCCATTATCATGGTCGCAAGCGGGGCGGCCGCAGCCGCCTTTATTGAGCAGTACCGGGCGGCTGGTGGTGCATCA
CAGTTGCTTTCGCACTCAGGGGCCGACATCGAGCAGTTATCAAAGCGACTGAGCGAGGAACAATTGCGGGGTGTGGCAAT
TGCGCAAGTTGTGCCCAATCCGTACAAGATCTCAGTGCGCCTGGCCAAGGAGTTCAGCGATACGATCGCTAAAACTCAGA
GTCTAGAGGTGCCGGTGAGCTATACCATGATGGAAGGCTATATCGCAGCCAAGGTCATCGTGGAAGCCGTGCGTCGACAA
GGAAAAAATCCAAATCGCTCAGGGTTTGTGACAGCGCTGGATAGCATGGATAGCTATGACCTCGGCGGCTACCTGGTGAG
CTTCAAGCCGGGAATACGCTCCGGCGCGAAATTCGTGGAGCTGTCCATCATCAGTGGCAGCGGGAAAATACGTCAGTAG

Upstream 100 bases:

>100_bases
TACTGAAAAGTGGGCAAAACTGGTGCGCAGTTCTGGTGCAACTGTGGATTGATTTGTGGCTACGCATATTGATCTCTACG
CTGTTGGGATATGAAGTTTT

Downstream 100 bases:

>100_bases
ATCGAAGAGTTTCGATCTGGCTGTTTGCTTGTTGCTGAATCGCACTGAAGCCTGACAATCTTGCCATTAAATCTTGACCC
ACACTTGGAGTGAACCCCTC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: Lipoprotein; Abc-Type Branched-Chain Amino Acid Transport Systems; ABC Branched-Chain Amino Acid Transporter

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKMNPSLVLILSLLGMPLAHAVEVVVGQVGPMSGLDANQGRAYAVGMQLMFNNVNKAGGINGHTFALVRKDDGGRAEDTI
SATKQLLTEEKPLVLAGFFGNRNITDLVSSGVLEANSIAVVGYRTTEMRPETPLLYNVRASLRDEIHKITEHLATVGINR
IGLFYEDGPGVASLLAATDEAVKKTRGNVISKASYPAGTARVTPAVEVFVKTTPQAIIMVASGAAAAAFIEQYRAAGGAS
QLLSHSGADIEQLSKRLSEEQLRGVAIAQVVPNPYKISVRLAKEFSDTIAKTQSLEVPVSYTMMEGYIAAKVIVEAVRRQ
GKNPNRSGFVTALDSMDSYDLGGYLVSFKPGIRSGAKFVELSIISGSGKIRQ

Sequences:

>Translated_372_residues
MKMNPSLVLILSLLGMPLAHAVEVVVGQVGPMSGLDANQGRAYAVGMQLMFNNVNKAGGINGHTFALVRKDDGGRAEDTI
SATKQLLTEEKPLVLAGFFGNRNITDLVSSGVLEANSIAVVGYRTTEMRPETPLLYNVRASLRDEIHKITEHLATVGINR
IGLFYEDGPGVASLLAATDEAVKKTRGNVISKASYPAGTARVTPAVEVFVKTTPQAIIMVASGAAAAAFIEQYRAAGGAS
QLLSHSGADIEQLSKRLSEEQLRGVAIAQVVPNPYKISVRLAKEFSDTIAKTQSLEVPVSYTMMEGYIAAKVIVEAVRRQ
GKNPNRSGFVTALDSMDSYDLGGYLVSFKPGIRSGAKFVELSIISGSGKIRQ
>Mature_372_residues
MKMNPSLVLILSLLGMPLAHAVEVVVGQVGPMSGLDANQGRAYAVGMQLMFNNVNKAGGINGHTFALVRKDDGGRAEDTI
SATKQLLTEEKPLVLAGFFGNRNITDLVSSGVLEANSIAVVGYRTTEMRPETPLLYNVRASLRDEIHKITEHLATVGINR
IGLFYEDGPGVASLLAATDEAVKKTRGNVISKASYPAGTARVTPAVEVFVKTTPQAIIMVASGAAAAAFIEQYRAAGGAS
QLLSHSGADIEQLSKRLSEEQLRGVAIAQVVPNPYKISVRLAKEFSDTIAKTQSLEVPVSYTMMEGYIAAKVIVEAVRRQ
GKNPNRSGFVTALDSMDSYDLGGYLVSFKPGIRSGAKFVELSIISGSGKIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39597; Mature: 39597

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMNPSLVLILSLLGMPLAHAVEVVVGQVGPMSGLDANQGRAYAVGMQLMFNNVNKAGGI
CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCC
NGHTFALVRKDDGGRAEDTISATKQLLTEEKPLVLAGFFGNRNITDLVSSGVLEANSIAV
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCEECCCEEE
VGYRTTEMRPETPLLYNVRASLRDEIHKITEHLATVGINRIGLFYEDGPGVASLLAATDE
EEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCHHHHHHHHHH
AVKKTRGNVISKASYPAGTARVTPAVEVFVKTTPQAIIMVASGAAAAAFIEQYRAAGGAS
HHHHHCCCEEECCCCCCCCCCCCHHEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCHH
QLLSHSGADIEQLSKRLSEEQLRGVAIAQVVPNPYKISVRLAKEFSDTIAKTQSLEVPVS
HHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCEE
YTMMEGYIAAKVIVEAVRRQGKNPNRSGFVTALDSMDSYDLGGYLVSFKPGIRSGAKFVE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEE
LSIISGSGKIRQ
EEEEECCCCCCC
>Mature Secondary Structure
MKMNPSLVLILSLLGMPLAHAVEVVVGQVGPMSGLDANQGRAYAVGMQLMFNNVNKAGGI
CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCC
NGHTFALVRKDDGGRAEDTISATKQLLTEEKPLVLAGFFGNRNITDLVSSGVLEANSIAV
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCEECCCEEE
VGYRTTEMRPETPLLYNVRASLRDEIHKITEHLATVGINRIGLFYEDGPGVASLLAATDE
EEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCHHHHHHHHHH
AVKKTRGNVISKASYPAGTARVTPAVEVFVKTTPQAIIMVASGAAAAAFIEQYRAAGGAS
HHHHHCCCEEECCCCCCCCCCCCHHEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCHH
QLLSHSGADIEQLSKRLSEEQLRGVAIAQVVPNPYKISVRLAKEFSDTIAKTQSLEVPVS
HHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCEE
YTMMEGYIAAKVIVEAVRRQGKNPNRSGFVTALDSMDSYDLGGYLVSFKPGIRSGAKFVE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEE
LSIISGSGKIRQ
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA