| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is bugT [H]
Identifier: 91790223
GI number: 91790223
Start: 4631737
End: 4632702
Strand: Reverse
Name: bugT [H]
Synonym: Bpro_4389
Alternate gene names: 91790223
Gene position: 4632702-4631737 (Counterclockwise)
Preceding gene: 91790224
Following gene: 91790222
Centisome position: 89.09
GC content: 51.04
Gene sequence:
>966_bases ATGACGAATATTTCTAGGTTAATTACAAGCCTATTCATTGCATTGGCCGCCACAGCCGCTTACGCGGAAAGCTATCCAAC GAAGCCGATCCGTTTGATCGTGCCGTTTCCTCCAGGGGGAACCACCGACAATCTTGGTCGCCTGCTGGCCAGCCGTCTGT CCGAATCGCTTGGACAACAGGTGATTGTTGACAATCGTGCAGGTGCAGGCGGCACTCTCGGTACAGATTTCGTGGCTAAG TCGGCGGCGGATGGATACACGTTGTTGTTCGGAGGAATCGGCCTGGCAATCAATGCGTCGCTATATAAGAACTTGCCATA CGATTCAAAGAAGGATTTCACCCCCATCGCAACGTTCGCGACTGTTCCAAACGTATTGGTGGTCAATCCAACGGTTCCGG TTAAGTCGGTTAAAGAATTAATCGACTATTCAAAGAGACATCCCACCACCCTGTTCATGGGTTCGGCCGGCAATGGAACT ACCAACCATCTTTCGGGTGAGTTGTTCAAATCGATGACGGGAGCTACTTTTGCGCACGTACCTTACAAGGGTAGCGGACC CGCGATGACTGATTTGTTGGGAAATCAGATTCAGCTGATGTTCGACAATCTTCCAGGATCGGTGCAGGGGATTAAAGCTG GAAAACTGCGTCCGCTAGCTGTAACGAGCACGACAAGGTCACCGGTACTGCCCAACGTACCGACAATGATTGAAGCAGGA GTGCCGGGGTACGCCGTAAATGTGTGGTCTGGTGTCCTGGGGCCAAAGGACCTACCAAAGGAAATTCTGGTCAAGCTTTC GAATGAAATTTCGCGTATCGCACGGGATAAAGCAATGGTTGAGAAACTTACCCTGCAGGGCGCTACCCCACTTGTCTCGA CGCCGGAAGAACTCACTAAGCGTATTCAATCAGATACTGAAAAGTGGGCAAAACTGGTGCGCAGTTCTGGTGCAACTGTG GATTGA
Upstream 100 bases:
>100_bases TCAGACAAGCGCTGCACGTTGTGGTACTTCTGATAGTGCTGAGTAGTGAATAGCAACGATCACTGTCACATTCCTTCGAC CTTTCACTGGAATCTACATC
Downstream 100 bases:
>100_bases TTTGTGGCTACGCATATTGATCTCTACGCTGTTGGGATATGAAGTTTTATGAAAATGAATCCAAGCTTAGTTCTCATTCT TTCCCTGCTAGGGATGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTNISRLITSLFIALAATAAYAESYPTKPIRLIVPFPPGGTTDNLGRLLASRLSESLGQQVIVDNRAGAGGTLGTDFVAK SAADGYTLLFGGIGLAINASLYKNLPYDSKKDFTPIATFATVPNVLVVNPTVPVKSVKELIDYSKRHPTTLFMGSAGNGT TNHLSGELFKSMTGATFAHVPYKGSGPAMTDLLGNQIQLMFDNLPGSVQGIKAGKLRPLAVTSTTRSPVLPNVPTMIEAG VPGYAVNVWSGVLGPKDLPKEILVKLSNEISRIARDKAMVEKLTLQGATPLVSTPEELTKRIQSDTEKWAKLVRSSGATV D
Sequences:
>Translated_321_residues MTNISRLITSLFIALAATAAYAESYPTKPIRLIVPFPPGGTTDNLGRLLASRLSESLGQQVIVDNRAGAGGTLGTDFVAK SAADGYTLLFGGIGLAINASLYKNLPYDSKKDFTPIATFATVPNVLVVNPTVPVKSVKELIDYSKRHPTTLFMGSAGNGT TNHLSGELFKSMTGATFAHVPYKGSGPAMTDLLGNQIQLMFDNLPGSVQGIKAGKLRPLAVTSTTRSPVLPNVPTMIEAG VPGYAVNVWSGVLGPKDLPKEILVKLSNEISRIARDKAMVEKLTLQGATPLVSTPEELTKRIQSDTEKWAKLVRSSGATV D >Mature_320_residues TNISRLITSLFIALAATAAYAESYPTKPIRLIVPFPPGGTTDNLGRLLASRLSESLGQQVIVDNRAGAGGTLGTDFVAKS AADGYTLLFGGIGLAINASLYKNLPYDSKKDFTPIATFATVPNVLVVNPTVPVKSVKELIDYSKRHPTTLFMGSAGNGTT NHLSGELFKSMTGATFAHVPYKGSGPAMTDLLGNQIQLMFDNLPGSVQGIKAGKLRPLAVTSTTRSPVLPNVPTMIEAGV PGYAVNVWSGVLGPKDLPKEILVKLSNEISRIARDKAMVEKLTLQGATPLVSTPEELTKRIQSDTEKWAKLVRSSGATVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33982; Mature: 33850
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNISRLITSLFIALAATAAYAESYPTKPIRLIVPFPPGGTTDNLGRLLASRLSESLGQQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCE VIVDNRAGAGGTLGTDFVAKSAADGYTLLFGGIGLAINASLYKNLPYDSKKDFTPIATFA EEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEHHHHHCCCCCCCCCCCHHHHHH TVPNVLVVNPTVPVKSVKELIDYSKRHPTTLFMGSAGNGTTNHLSGELFKSMTGATFAHV HCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEC PYKGSGPAMTDLLGNQIQLMFDNLPGSVQGIKAGKLRPLAVTSTTRSPVLPNVPTMIEAG CCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCC VPGYAVNVWSGVLGPKDLPKEILVKLSNEISRIARDKAMVEKLTLQGATPLVSTPEELTK CCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RIQSDTEKWAKLVRSSGATVD HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNISRLITSLFIALAATAAYAESYPTKPIRLIVPFPPGGTTDNLGRLLASRLSESLGQQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCE VIVDNRAGAGGTLGTDFVAKSAADGYTLLFGGIGLAINASLYKNLPYDSKKDFTPIATFA EEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEHHHHHCCCCCCCCCCCHHHHHH TVPNVLVVNPTVPVKSVKELIDYSKRHPTTLFMGSAGNGTTNHLSGELFKSMTGATFAHV HCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEC PYKGSGPAMTDLLGNQIQLMFDNLPGSVQGIKAGKLRPLAVTSTTRSPVLPNVPTMIEAG CCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCC VPGYAVNVWSGVLGPKDLPKEILVKLSNEISRIARDKAMVEKLTLQGATPLVSTPEELTK CCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RIQSDTEKWAKLVRSSGATVD HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]