| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is argH1 [H]
Identifier: 91790220
GI number: 91790220
Start: 4627855
End: 4629354
Strand: Reverse
Name: argH1 [H]
Synonym: Bpro_4386
Alternate gene names: 91790220
Gene position: 4629354-4627855 (Counterclockwise)
Preceding gene: 91790222
Following gene: 91790219
Centisome position: 89.02
GC content: 59.8
Gene sequence:
>1500_bases ATGGAATCAAAAGTCAGTCGCCGGCTTAAAGAGCCAACCGCAAAGGAGATCTGCGAGCACATCACTGGTCCGCGCCTTGC GCGCGATTTCCCGAGGCAGTTCCCCTATCTCACCGTCGTGAACCAGGCGCATTTGCTGATGCTGCACAAGACGGGTTTGA TCTCGCCGGACGTGGCAAAGAAGCTCGCCAACGGTTTGGCGCAGATGGAAGCCGAAGGCCCTGAAGCCGTGGAACTGGAT CCGGCCAAGGAGGAGCCCTACTTCAACTACGAATCGAAGCTGATGGAGATCGTCGGGCGCGACGTTGGAGGTCGACTGCA TATGGCGCGCAGTCGAAACGACATTGGGGTGACGATTGATCGGCTGCGCGCACGGAGTGCCGTGCTCAATGTCCTAGAAG CTCTTGGACGGGTGCGCAGGGTTGCCCTTGAGCGGGCGAGCAAGTTCACAAACGTCATCATGCCCGGGTATACCCATCTG CAGCCCGCGCAGCCGATCACGTATGGCTTCTATCTGAGCGCTGTGGCGGAAGCGCTGGGGAGGGACATGGATCGTCTGCA TGCCTCTTTGGCTCGCATCGATGAGTCGCCGCTTGGCGCGGGGGCGTTGGCGGGGACACGTTTCCCCATCGATAGGAGCG TGACGGCTACGGCACTCGGCTTTAGCTCCGTCGCGCCCAACACCCTGGATGCGGTCGCCTCGCGAGACTTCGCGTGGGAG GCGATGTCGGCGATGACCATCGTCGCGCTCACTTGGGGGAGGGTGGCGCAGGACTTTCAGGTCTGGTCCACGCTCGAATT CGGGCTTGTGTCGTTCCCAGATCGAGTGGCCAGCACGTCGAGCATCATGCCGCAGAAGAAGAACCCCGTCGTACTTGAGT ACCTTCGGGGCAAGAGCAGTCACATCATCGGACTGCTTACCGCTTCCCTTGTTGCAGTGAAGGGAACCCACTTCACCCAT GCCGGCGATAGCAGCCGTGAAAGCATGCGCAGCTTTTGGGAGTGCGCTGAGGAGACTCTCCGATGCCTCGCACTGTTCGA GTTGATCGTGAGCACGGCGGAGCCCAAAGAAAAGAACATGCTGCAGCATGTTCGATTCGATTTTTCGGTTGCAACCGACC TTGCCGATGGGCTCGTGGCCGAGGCCGGCATGTCCTTTCGCGAGGCGCACCACGTGGTGGGTGGCCTCGTTCGCCTTGCA CTGGACGAAGGCAAGTCTGCGAACGAGCTAACGAGCGCAATGCTGGATCGCGCAGCAGTCGACGTTATTGGATCCGCAAT CGAGTGGCCCGAGCAGAAGCTGCGCAAGTACCTCGATCCCATTGAGTGTGTGAACATGCGGCACAACGGGGGGCCAGCGC CTGCGGAGCTGTCCGGTGCAATCAAGAAGCAGCTCGGTAGTCTCGAAAATGTTCTGGCCAAAGTTCAGTCAACCAGAGAT CACTTTACCGCAGCGCACGAACAGATGAAGCGCGACGTGGCCGCCATCGCAAGTCAATAA
Upstream 100 bases:
>100_bases AGTCATATCAAATGCGTATTGAGTACTTGAAAACTGTCATTTGACGCCATGACGCTCTCTCTTGATACTTGCATTAACTT AAAAAACGGATTTGAAAACA
Downstream 100 bases:
>100_bases CCGTCCACTCACCGTAAAGGATCTGAACCATGAAGTTCCTTGTTAGAACTCTGATCGCGACCATCGCCGCTGTCTGCGTT GCTACCAACGCATTCGCTGC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL 1; Arginosuccinase 1 [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MESKVSRRLKEPTAKEICEHITGPRLARDFPRQFPYLTVVNQAHLLMLHKTGLISPDVAKKLANGLAQMEAEGPEAVELD PAKEEPYFNYESKLMEIVGRDVGGRLHMARSRNDIGVTIDRLRARSAVLNVLEALGRVRRVALERASKFTNVIMPGYTHL QPAQPITYGFYLSAVAEALGRDMDRLHASLARIDESPLGAGALAGTRFPIDRSVTATALGFSSVAPNTLDAVASRDFAWE AMSAMTIVALTWGRVAQDFQVWSTLEFGLVSFPDRVASTSSIMPQKKNPVVLEYLRGKSSHIIGLLTASLVAVKGTHFTH AGDSSRESMRSFWECAEETLRCLALFELIVSTAEPKEKNMLQHVRFDFSVATDLADGLVAEAGMSFREAHHVVGGLVRLA LDEGKSANELTSAMLDRAAVDVIGSAIEWPEQKLRKYLDPIECVNMRHNGGPAPAELSGAIKKQLGSLENVLAKVQSTRD HFTAAHEQMKRDVAAIASQ
Sequences:
>Translated_499_residues MESKVSRRLKEPTAKEICEHITGPRLARDFPRQFPYLTVVNQAHLLMLHKTGLISPDVAKKLANGLAQMEAEGPEAVELD PAKEEPYFNYESKLMEIVGRDVGGRLHMARSRNDIGVTIDRLRARSAVLNVLEALGRVRRVALERASKFTNVIMPGYTHL QPAQPITYGFYLSAVAEALGRDMDRLHASLARIDESPLGAGALAGTRFPIDRSVTATALGFSSVAPNTLDAVASRDFAWE AMSAMTIVALTWGRVAQDFQVWSTLEFGLVSFPDRVASTSSIMPQKKNPVVLEYLRGKSSHIIGLLTASLVAVKGTHFTH AGDSSRESMRSFWECAEETLRCLALFELIVSTAEPKEKNMLQHVRFDFSVATDLADGLVAEAGMSFREAHHVVGGLVRLA LDEGKSANELTSAMLDRAAVDVIGSAIEWPEQKLRKYLDPIECVNMRHNGGPAPAELSGAIKKQLGSLENVLAKVQSTRD HFTAAHEQMKRDVAAIASQ >Mature_499_residues MESKVSRRLKEPTAKEICEHITGPRLARDFPRQFPYLTVVNQAHLLMLHKTGLISPDVAKKLANGLAQMEAEGPEAVELD PAKEEPYFNYESKLMEIVGRDVGGRLHMARSRNDIGVTIDRLRARSAVLNVLEALGRVRRVALERASKFTNVIMPGYTHL QPAQPITYGFYLSAVAEALGRDMDRLHASLARIDESPLGAGALAGTRFPIDRSVTATALGFSSVAPNTLDAVASRDFAWE AMSAMTIVALTWGRVAQDFQVWSTLEFGLVSFPDRVASTSSIMPQKKNPVVLEYLRGKSSHIIGLLTASLVAVKGTHFTH AGDSSRESMRSFWECAEETLRCLALFELIVSTAEPKEKNMLQHVRFDFSVATDLADGLVAEAGMSFREAHHVVGGLVRLA LDEGKSANELTSAMLDRAAVDVIGSAIEWPEQKLRKYLDPIECVNMRHNGGPAPAELSGAIKKQLGSLENVLAKVQSTRD HFTAAHEQMKRDVAAIASQ
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=365, Percent_Identity=33.972602739726, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI68303542, Length=365, Percent_Identity=33.972602739726, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI68303547, Length=365, Percent_Identity=32.8767123287671, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI68303549, Length=365, Percent_Identity=30.6849315068493, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1790398, Length=383, Percent_Identity=37.3368146214099, Blast_Score=223, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17553882, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32565146, Length=222, Percent_Identity=27.9279279279279, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6321806, Length=355, Percent_Identity=39.1549295774648, Blast_Score=221, Evalue=1e-58, Organism=Drosophila melanogaster, GI221473854, Length=371, Percent_Identity=35.8490566037736, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI78706858, Length=371, Percent_Identity=35.8490566037736, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24640179, Length=247, Percent_Identity=26.7206477732794, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI78710009, Length=199, Percent_Identity=27.1356783919598, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640177, Length=247, Percent_Identity=26.7206477732794, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 54664; Mature: 54664
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKVSRRLKEPTAKEICEHITGPRLARDFPRQFPYLTVVNQAHLLMLHKTGLISPDVAK CCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCEEEEECCHHEEEEECCCCCCHHHHH KLANGLAQMEAEGPEAVELDPAKEEPYFNYESKLMEIVGRDVGGRLHMARSRNDIGVTID HHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHH RLRARSAVLNVLEALGRVRRVALERASKFTNVIMPGYTHLQPAQPITYGFYLSAVAEALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC RDMDRLHASLARIDESPLGAGALAGTRFPIDRSVTATALGFSSVAPNTLDAVASRDFAWE CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHCCCHHHHHHHCCCHHHH AMSAMTIVALTWGRVAQDFQVWSTLEFGLVSFPDRVASTSSIMPQKKNPVVLEYLRGKSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCCC HIIGLLTASLVAVKGTHFTHAGDSSRESMRSFWECAEETLRCLALFELIVSTAEPKEKNM HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LQHVRFDFSVATDLADGLVAEAGMSFREAHHVVGGLVRLALDEGKSANELTSAMLDRAAV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DVIGSAIEWPEQKLRKYLDPIECVNMRHNGGPAPAELSGAIKKQLGSLENVLAKVQSTRD HHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HFTAAHEQMKRDVAAIASQ HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESKVSRRLKEPTAKEICEHITGPRLARDFPRQFPYLTVVNQAHLLMLHKTGLISPDVAK CCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCEEEEECCHHEEEEECCCCCCHHHHH KLANGLAQMEAEGPEAVELDPAKEEPYFNYESKLMEIVGRDVGGRLHMARSRNDIGVTID HHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHH RLRARSAVLNVLEALGRVRRVALERASKFTNVIMPGYTHLQPAQPITYGFYLSAVAEALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC RDMDRLHASLARIDESPLGAGALAGTRFPIDRSVTATALGFSSVAPNTLDAVASRDFAWE CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHCCCHHHHHHHCCCHHHH AMSAMTIVALTWGRVAQDFQVWSTLEFGLVSFPDRVASTSSIMPQKKNPVVLEYLRGKSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCCC HIIGLLTASLVAVKGTHFTHAGDSSRESMRSFWECAEETLRCLALFELIVSTAEPKEKNM HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LQHVRFDFSVATDLADGLVAEAGMSFREAHHVVGGLVRLALDEGKSANELTSAMLDRAAV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DVIGSAIEWPEQKLRKYLDPIECVNMRHNGGPAPAELSGAIKKQLGSLENVLAKVQSTRD HHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HFTAAHEQMKRDVAAIASQ HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA