Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91790219

Identifier: 91790219

GI number: 91790219

Start: 4626854

End: 4627825

Strand: Reverse

Name: 91790219

Synonym: Bpro_4385

Alternate gene names: NA

Gene position: 4627825-4626854 (Counterclockwise)

Preceding gene: 91790220

Following gene: 91790218

Centisome position: 88.99

GC content: 55.14

Gene sequence:

>972_bases
ATGAAGTTCCTTGTTAGAACTCTGATCGCGACCATCGCCGCTGTCTGCGTTGCTACCAACGCATTCGCTGCCACGTACCC
GGAGAAGCCGATCCGGTTGATCGTCCCTTTTGCGCCCGGTGGCAGTGTAGACCTGATCGGAAGGGTTCTCGCGCAACGCC
TTTCCGAGAAACTAGGTCAGCAAGTCATTGTCGAAAATAAAGCGGGGGCAGGAGGAACGATGGGGGCGGACGTTGTAGCC
AAGGCCCCGCCCGACGGATACACCCTCCTCCTTGCGTCATCGGGCCACCAATCATTTCATTCGCTGCTATACAAGAAGCT
ACCCTATGACGCAAACAAGGCATTCAAGCAAGTGGCCCTGTTTGCAGCCCTACCCAATGTACTTGTCGTCGCGAACAAGG
TGCCTGCAAAAACTGTCCAGGAACTGATCGCCTATTCCAGATCGGGAGGCAAAAAGCTCTTCATGGGTTCTTCGGGAACC
GGCGGCGTCAATCACCTGATCGGCGAATTGTTTAAATTCAAGACAAACACTGACATCGACCATGTGCCGTACAAAGGTGC
AGGTCCTGCTAATAACGACCTGCTGGCGGGCCAGATTGACTTGATGTTTGTGAACCTGCCGACCGTCCTCCCGCATATCC
AGAGCGGAAAGCTGCGTGCGCTTGCAATGACTAGTGCGCAACGATCCCCCTCGCTGCCAAACGTTCCGACGATGGCAGAG
GCTGGCGTTCCCGACTTTGTGGTGGACTCCTGGTCTGGCGTGCTGGCCCCAGCGGGTACACCGAAGGCGATCATCGACAA
GCTCTCTATGGAAATCAACAAGATCACGAAGGAAAAGTCGACCGCCGAGCAACTGGCGGCGCAAGGTGCATTGCCACTGC
CCGGAACTAGTGCTGACTATTTCGCACTTGTGCGCTTCGAAACGCAACGATGGAGCGAAGTGATCAAGAAGGCAAATATC
ACCCTTGATTGA

Upstream 100 bases:

>100_bases
CAACCAGAGATCACTTTACCGCAGCGCACGAACAGATGAAGCGCGACGTGGCCGCCATCGCAAGTCAATAACCGTCCACT
CACCGTAAAGGATCTGAACC

Downstream 100 bases:

>100_bases
GCAGAAAGGTGAATAAGGCAATCAATCAAGCGGGCATGGCACCGATGCTCGGTGTACTTGGCGGGATGGGACCCGCTGCA
GGCGCTTACTTTGCGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKFLVRTLIATIAAVCVATNAFAATYPEKPIRLIVPFAPGGSVDLIGRVLAQRLSEKLGQQVIVENKAGAGGTMGADVVA
KAPPDGYTLLLASSGHQSFHSLLYKKLPYDANKAFKQVALFAALPNVLVVANKVPAKTVQELIAYSRSGGKKLFMGSSGT
GGVNHLIGELFKFKTNTDIDHVPYKGAGPANNDLLAGQIDLMFVNLPTVLPHIQSGKLRALAMTSAQRSPSLPNVPTMAE
AGVPDFVVDSWSGVLAPAGTPKAIIDKLSMEINKITKEKSTAEQLAAQGALPLPGTSADYFALVRFETQRWSEVIKKANI
TLD

Sequences:

>Translated_323_residues
MKFLVRTLIATIAAVCVATNAFAATYPEKPIRLIVPFAPGGSVDLIGRVLAQRLSEKLGQQVIVENKAGAGGTMGADVVA
KAPPDGYTLLLASSGHQSFHSLLYKKLPYDANKAFKQVALFAALPNVLVVANKVPAKTVQELIAYSRSGGKKLFMGSSGT
GGVNHLIGELFKFKTNTDIDHVPYKGAGPANNDLLAGQIDLMFVNLPTVLPHIQSGKLRALAMTSAQRSPSLPNVPTMAE
AGVPDFVVDSWSGVLAPAGTPKAIIDKLSMEINKITKEKSTAEQLAAQGALPLPGTSADYFALVRFETQRWSEVIKKANI
TLD
>Mature_323_residues
MKFLVRTLIATIAAVCVATNAFAATYPEKPIRLIVPFAPGGSVDLIGRVLAQRLSEKLGQQVIVENKAGAGGTMGADVVA
KAPPDGYTLLLASSGHQSFHSLLYKKLPYDANKAFKQVALFAALPNVLVVANKVPAKTVQELIAYSRSGGKKLFMGSSGT
GGVNHLIGELFKFKTNTDIDHVPYKGAGPANNDLLAGQIDLMFVNLPTVLPHIQSGKLRALAMTSAQRSPSLPNVPTMAE
AGVPDFVVDSWSGVLAPAGTPKAIIDKLSMEINKITKEKSTAEQLAAQGALPLPGTSADYFALVRFETQRWSEVIKKANI
TLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34233; Mature: 34233

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLVRTLIATIAAVCVATNAFAATYPEKPIRLIVPFAPGGSVDLIGRVLAQRLSEKLGQ
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
QVIVENKAGAGGTMGADVVAKAPPDGYTLLLASSGHQSFHSLLYKKLPYDANKAFKQVAL
EEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHH
FAALPNVLVVANKVPAKTVQELIAYSRSGGKKLFMGSSGTGGVNHLIGELFKFKTNTDID
HHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC
HVPYKGAGPANNDLLAGQIDLMFVNLPTVLPHIQSGKLRALAMTSAQRSPSLPNVPTMAE
CCCCCCCCCCCCCEEECEEEEEEEECHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCHHH
AGVPDFVVDSWSGVLAPAGTPKAIIDKLSMEINKITKEKSTAEQLAAQGALPLPGTSADY
CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
FALVRFETQRWSEVIKKANITLD
EEEEEECHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFLVRTLIATIAAVCVATNAFAATYPEKPIRLIVPFAPGGSVDLIGRVLAQRLSEKLGQ
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
QVIVENKAGAGGTMGADVVAKAPPDGYTLLLASSGHQSFHSLLYKKLPYDANKAFKQVAL
EEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHH
FAALPNVLVVANKVPAKTVQELIAYSRSGGKKLFMGSSGTGGVNHLIGELFKFKTNTDID
HHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC
HVPYKGAGPANNDLLAGQIDLMFVNLPTVLPHIQSGKLRALAMTSAQRSPSLPNVPTMAE
CCCCCCCCCCCCCEEECEEEEEEEECHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCHHH
AGVPDFVVDSWSGVLAPAGTPKAIIDKLSMEINKITKEKSTAEQLAAQGALPLPGTSADY
CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
FALVRFETQRWSEVIKKANITLD
EEEEEECHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]