| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790156
Identifier: 91790156
GI number: 91790156
Start: 4552642
End: 4553670
Strand: Direct
Name: 91790156
Synonym: Bpro_4320
Alternate gene names: NA
Gene position: 4552642-4553670 (Clockwise)
Preceding gene: 91790155
Following gene: 91790157
Centisome position: 87.55
GC content: 60.06
Gene sequence:
>1029_bases ATGATCATCGATTGCCACGGCCACTACACCACCGCGCCCAAGGCGCTGGAGGAATGGCGCAACAGGCAGATTGCGGGCAT CAAGGATCCGTCAATGATGCCGAAGGCGTCGGACCTGAAAATCAGCGACGACGAACTGCGCGAGTCCATCGAGAGCAACC AGCTGCGCCTGATGAAAGAGCGCGGCAGCGACATCACCTTGTTCTCGCCGCGCGCGAGCTTCATGGCCCATCACATCGGT GACTTCAATGTGTCGTCGACCTGGGCGGCGATTTGCAACGAACTCTGCTTTCGCGTCAGCAGGCTGTTCCCGGACCACTT CGTGCCGGTCGCCATGCTGCCGCAGTCGCCCGGCGTGGACCCCAAGACGTGCATTGCGGAACTGGAGAAATGCGTCAAGG AATACGGCAGCGTCGGCATCAACCTGAACCCCGATCCTTCTGGCGGCCACTGGAATTCTCCGCCGCTTTCGGACAAGCAC TGGTACCCCATCTACGAGAAGATGGTCGAGTACGACCTGCCGGCGATGATTCACGTCAGCACCAGCTGCAACGCGTGCTT TCACACCACCGGCGCGCACTACCTGAACGCGGATACGACGGCCTTCATGCAGTGCCTGACCTCCGACCTGTTCAAGGACT TCCCGACACTTCGCTTTCTGATTCCACATGGCGGCGGCGCAGTACCCTACCACTGGGGGCGCTTTCGCGGCCTCGCCCAG GAGCTGAAGAAGCCGCTGCTGTCCGAACACCTGCTGAACAACATCTTCTTCGACACCTGCGTGTACCACCAGCCGGGCAT CGACCTACTCAACACCGTGATCCCGGTGAAGAACGTCTTGTTCGCGTCCGAAATGATCGGCGCCGTCCGTGGCATCGATC CGCAGACCGGCCACTACTACGACGACACCCAACGCTACATCCAGGCCTCGAAGATCCTGAGCGATGAAGACAGACACCAG ATTTACGAAGGCAATTCGCGGCGAGTCTTCCCGCGGCTCGATGCGCTGTTGAAAGCGAAAGGACTCTGA
Upstream 100 bases:
>100_bases AGGAAGTGCGCCGCATGCTCGACTTCATGGGTTCACGTGCCGCTGCCGAAGCGAAGCGCCGTCACGGCATGGAACCCGCC TGAATCACAAGGAAAACACA
Downstream 100 bases:
>100_bases CCATGACGACACTCGGAATCGTCAAACGCAACATCGTTCGCGCAGACCGCGGCGCCATTGAAACGCTGGGCCGCGTCGGC TCGGCCACATCGCACGAAGC
Product: amidohydrolase 2
Products: NA
Alternate protein names: FLDW Protein; Hydrolase; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase; Aminocarboxymuconate-Semialdehyde Decarboxylase
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIIDCHGHYTTAPKALEEWRNRQIAGIKDPSMMPKASDLKISDDELRESIESNQLRLMKERGSDITLFSPRASFMAHHIG DFNVSSTWAAICNELCFRVSRLFPDHFVPVAMLPQSPGVDPKTCIAELEKCVKEYGSVGINLNPDPSGGHWNSPPLSDKH WYPIYEKMVEYDLPAMIHVSTSCNACFHTTGAHYLNADTTAFMQCLTSDLFKDFPTLRFLIPHGGGAVPYHWGRFRGLAQ ELKKPLLSEHLLNNIFFDTCVYHQPGIDLLNTVIPVKNVLFASEMIGAVRGIDPQTGHYYDDTQRYIQASKILSDEDRHQ IYEGNSRRVFPRLDALLKAKGL
Sequences:
>Translated_342_residues MIIDCHGHYTTAPKALEEWRNRQIAGIKDPSMMPKASDLKISDDELRESIESNQLRLMKERGSDITLFSPRASFMAHHIG DFNVSSTWAAICNELCFRVSRLFPDHFVPVAMLPQSPGVDPKTCIAELEKCVKEYGSVGINLNPDPSGGHWNSPPLSDKH WYPIYEKMVEYDLPAMIHVSTSCNACFHTTGAHYLNADTTAFMQCLTSDLFKDFPTLRFLIPHGGGAVPYHWGRFRGLAQ ELKKPLLSEHLLNNIFFDTCVYHQPGIDLLNTVIPVKNVLFASEMIGAVRGIDPQTGHYYDDTQRYIQASKILSDEDRHQ IYEGNSRRVFPRLDALLKAKGL >Mature_342_residues MIIDCHGHYTTAPKALEEWRNRQIAGIKDPSMMPKASDLKISDDELRESIESNQLRLMKERGSDITLFSPRASFMAHHIG DFNVSSTWAAICNELCFRVSRLFPDHFVPVAMLPQSPGVDPKTCIAELEKCVKEYGSVGINLNPDPSGGHWNSPPLSDKH WYPIYEKMVEYDLPAMIHVSTSCNACFHTTGAHYLNADTTAFMQCLTSDLFKDFPTLRFLIPHGGGAVPYHWGRFRGLAQ ELKKPLLSEHLLNNIFFDTCVYHQPGIDLLNTVIPVKNVLFASEMIGAVRGIDPQTGHYYDDTQRYIQASKILSDEDRHQ IYEGNSRRVFPRLDALLKAKGL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38652; Mature: 38652
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDCHGHYTTAPKALEEWRNRQIAGIKDPSMMPKASDLKISDDELRESIESNQLRLMKE CEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RGSDITLFSPRASFMAHHIGDFNVSSTWAAICNELCFRVSRLFPDHFVPVAMLPQSPGVD CCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC PKTCIAELEKCVKEYGSVGINLNPDPSGGHWNSPPLSDKHWYPIYEKMVEYDLPAMIHVS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC TSCNACFHTTGAHYLNADTTAFMQCLTSDLFKDFPTLRFLIPHGGGAVPYHWGRFRGLAQ CCCCCCEECCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH ELKKPLLSEHLLNNIFFDTCVYHQPGIDLLNTVIPVKNVLFASEMIGAVRGIDPQTGHYY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DDTQRYIQASKILSDEDRHQIYEGNSRRVFPRLDALLKAKGL HHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure MIIDCHGHYTTAPKALEEWRNRQIAGIKDPSMMPKASDLKISDDELRESIESNQLRLMKE CEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RGSDITLFSPRASFMAHHIGDFNVSSTWAAICNELCFRVSRLFPDHFVPVAMLPQSPGVD CCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCC PKTCIAELEKCVKEYGSVGINLNPDPSGGHWNSPPLSDKHWYPIYEKMVEYDLPAMIHVS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEC TSCNACFHTTGAHYLNADTTAFMQCLTSDLFKDFPTLRFLIPHGGGAVPYHWGRFRGLAQ CCCCCCEECCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH ELKKPLLSEHLLNNIFFDTCVYHQPGIDLLNTVIPVKNVLFASEMIGAVRGIDPQTGHYY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DDTQRYIQASKILSDEDRHQIYEGNSRRVFPRLDALLKAKGL HHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA