| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790155
Identifier: 91790155
GI number: 91790155
Start: 4551965
End: 4552624
Strand: Direct
Name: 91790155
Synonym: Bpro_4319
Alternate gene names: NA
Gene position: 4551965-4552624 (Clockwise)
Preceding gene: 91790148
Following gene: 91790156
Centisome position: 87.53
GC content: 66.82
Gene sequence:
>660_bases ATGGCCACCCGCCTGGTGCTTGGCGAATTGGCTGCGGCATATACGCATCGTTCAGGCGACGCCGTCGACATTGAATCTGT CGGCGGCCTCGACGCGGCTCGCCGGGTCGAAGCCGGGGAGCCATTCGACGTCGTCTTTCTGGCGTCCAGCGCGATCGACA AACTCGTCGCATCGGGCTGTGTGGTCGAGGGCAGCCAGATCGACCTGGTCCATTCGGATGTCGCCGTCGCTGTGCGTGCC GGCTCACCAAGGCCGGACATCGCCACCGAGGGCGCCGTGCGTCGCGCGGTGCAAGAGGCCGAGACGATCGGCTACTCCAC GGGCCCAAGCGGCGTGGCGCTGACACAACTCTTTGAGCGCTGGGGGATCGCCTCCGAGATCCAGCCACGCATCGTGCATG CGCCGCCTGGCGTTCCGGTCGGCGAATTGGTCGCGCGCGGCGAGGTGGCTCTGGGCTTTCAGCAGCTGAGCGAACTGATG CACCTCGAGGGCATCGACGTGGTCGGCCGATTGCCCCCCGCCATCCAGATCACCACCACCTTCTCCGCGGGCCTTTGCTG TGCATCGACGCACGGCCAGGAAGTGCGCCGCATGCTCGACTTCATGGGTTCACGTGCCGCTGCCGAAGCGAAGCGCCGTC ACGGCATGGAACCCGCCTGA
Upstream 100 bases:
>100_bases ATAACCGATTGTTCTAGCTGATAGTGCGGCTGATGGCTTCCATGTGAGATGCGGTGCGAAGCAAAATTGCCGCATGGCAT CGATCAAGGGAATTTCGTCC
Downstream 100 bases:
>100_bases ATCACAAGGAAAACACAATGATCATCGATTGCCACGGCCACTACACCACCGCGCCCAAGGCGCTGGAGGAATGGCGCAAC AGGCAGATTGCGGGCATCAA
Product: putative ABC transporter periplasmic molybdate-binding protein
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MATRLVLGELAAAYTHRSGDAVDIESVGGLDAARRVEAGEPFDVVFLASSAIDKLVASGCVVEGSQIDLVHSDVAVAVRA GSPRPDIATEGAVRRAVQEAETIGYSTGPSGVALTQLFERWGIASEIQPRIVHAPPGVPVGELVARGEVALGFQQLSELM HLEGIDVVGRLPPAIQITTTFSAGLCCASTHGQEVRRMLDFMGSRAAAEAKRRHGMEPA
Sequences:
>Translated_219_residues MATRLVLGELAAAYTHRSGDAVDIESVGGLDAARRVEAGEPFDVVFLASSAIDKLVASGCVVEGSQIDLVHSDVAVAVRA GSPRPDIATEGAVRRAVQEAETIGYSTGPSGVALTQLFERWGIASEIQPRIVHAPPGVPVGELVARGEVALGFQQLSELM HLEGIDVVGRLPPAIQITTTFSAGLCCASTHGQEVRRMLDFMGSRAAAEAKRRHGMEPA >Mature_218_residues ATRLVLGELAAAYTHRSGDAVDIESVGGLDAARRVEAGEPFDVVFLASSAIDKLVASGCVVEGSQIDLVHSDVAVAVRAG SPRPDIATEGAVRRAVQEAETIGYSTGPSGVALTQLFERWGIASEIQPRIVHAPPGVPVGELVARGEVALGFQQLSELMH LEGIDVVGRLPPAIQITTTFSAGLCCASTHGQEVRRMLDFMGSRAAAEAKRRHGMEPA
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22933; Mature: 22802
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRLVLGELAAAYTHRSGDAVDIESVGGLDAARRVEAGEPFDVVFLASSAIDKLVASGC CCCHHHHHHHHHHHHCCCCCEEEHHHCCCCHHHHHCCCCCCEEEEEEHHHHHHHHHHCCC VVEGSQIDLVHSDVAVAVRAGSPRPDIATEGAVRRAVQEAETIGYSTGPSGVALTQLFER EECCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH WGIASEIQPRIVHAPPGVPVGELVARGEVALGFQQLSELMHLEGIDVVGRLPPAIQITTT HCCCCCCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEE FSAGLCCASTHGQEVRRMLDFMGSRAAAEAKRRHGMEPA CCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure ATRLVLGELAAAYTHRSGDAVDIESVGGLDAARRVEAGEPFDVVFLASSAIDKLVASGC CCHHHHHHHHHHHHCCCCCEEEHHHCCCCHHHHHCCCCCCEEEEEEHHHHHHHHHHCCC VVEGSQIDLVHSDVAVAVRAGSPRPDIATEGAVRRAVQEAETIGYSTGPSGVALTQLFER EECCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH WGIASEIQPRIVHAPPGVPVGELVARGEVALGFQQLSELMHLEGIDVVGRLPPAIQITTT HCCCCCCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEE FSAGLCCASTHGQEVRRMLDFMGSRAAAEAKRRHGMEPA CCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA