| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790148
Identifier: 91790148
GI number: 91790148
Start: 4542602
End: 4542910
Strand: Direct
Name: 91790148
Synonym: Bpro_4310
Alternate gene names: NA
Gene position: 4542602-4542910 (Clockwise)
Preceding gene: 91790147
Following gene: 91790155
Centisome position: 87.35
GC content: 52.1
Gene sequence:
>309_bases TTGGACCAGAAACTTCTACGCTCTAAATTTGACTCGCGCGGTGAAGCTATCGAACCTGAAGTTCCTTGCTTCATGTCCAT GTATTTCAAGATGTCTGGCCGCTTCGCTGCTGCAGAGGCAATTTCACCCAGCGGTTCAAACAAGCTAGCGTTCTCATTCG ATGCCATGATCGAGTCGTACACCAGGTTGAACGGAAGCAGATTTTCCATTTCCCTAGAGGGCAGATCGAAGTGCATGCAA ATCCAAGTTGCAGCGGCGGATTCGGCTGCGCATTCCCGACTTATGTGGCCGGGGCCCGCAGTGGGATGA
Upstream 100 bases:
>100_bases AACTAATGGGCCGATGCCTGGAACGATTCTGCAATCGCAAGGATGACTTGCACACTCATCGCCGCAGACCCTATCTTCAA CGTCGCACTCGTTAACAACC
Downstream 100 bases:
>100_bases TCTCTGTCAGAGTCGGTAACCGCACAAGTGAATTTCTCGCGGGCGCTCAAAGTTTCTTGAAAGCAGTTCAATATTTCCGA GCCGCCTCCGTTGTGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDQKLLRSKFDSRGEAIEPEVPCFMSMYFKMSGRFAAAEAISPSGSNKLAFSFDAMIESYTRLNGSRFSISLEGRSKCMQ IQVAAADSAAHSRLMWPGPAVG
Sequences:
>Translated_102_residues MDQKLLRSKFDSRGEAIEPEVPCFMSMYFKMSGRFAAAEAISPSGSNKLAFSFDAMIESYTRLNGSRFSISLEGRSKCMQ IQVAAADSAAHSRLMWPGPAVG >Mature_102_residues MDQKLLRSKFDSRGEAIEPEVPCFMSMYFKMSGRFAAAEAISPSGSNKLAFSFDAMIESYTRLNGSRFSISLEGRSKCMQ IQVAAADSAAHSRLMWPGPAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11163; Mature: 11163
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKLLRSKFDSRGEAIEPEVPCFMSMYFKMSGRFAAAEAISPSGSNKLAFSFDAMIESY CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEEHHHHHHHHH TRLNGSRFSISLEGRSKCMQIQVAAADSAAHSRLMWPGPAVG HHCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCC >Mature Secondary Structure MDQKLLRSKFDSRGEAIEPEVPCFMSMYFKMSGRFAAAEAISPSGSNKLAFSFDAMIESY CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEEHHHHHHHHH TRLNGSRFSISLEGRSKCMQIQVAAADSAAHSRLMWPGPAVG HHCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA