Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cya3 [H]

Identifier: 91790054

GI number: 91790054

Start: 4434689

End: 4436512

Strand: Direct

Name: cya3 [H]

Synonym: Bpro_4216

Alternate gene names: 91790054

Gene position: 4434689-4436512 (Clockwise)

Preceding gene: 91790053

Following gene: 91790055

Centisome position: 85.28

GC content: 60.09

Gene sequence:

>1824_bases
ATGAGGAGGCGAATAATTGTTACACCGCTTACGATGTCTTCCTCACTGATTGAACTCCCCCATTTCATGCATCGCAGCAC
CAAGGTGCTGCTGGTGATGGATGTGGTGGAGTCGGTCAGGCTCATGGAGCAGGACGAACATGACTTTGTACAGCGGTGGC
AACAACTGGTGCAGCAGGCGGAGCAGCAAATTTTGCCGCTGCATGGCGGGCGCATTGTCAAAAGCCTGGGTGATGGCCTG
ATGCTGGAGTTTGCCAATGCGCAAAGTGGCGTCAGGGCGGCCTTCGCCCTGCAGCAGTTCAGCCAGCAGGCCAACGCCGG
CCTGCGCCCTGAGCAGCAGATGCACCTGCGCATGGGTGGGCACTTAGCCAGCTTTGTGACCGACCAGCACGATATCTACG
GCACAGATGTGAACCTGACGGCGCGGTTTTGCACCCTGGCCGGGCCCAGCGAGATCGTGGTTTCTGCCGAGCTTCGCGAT
CAACTCGTTCCCGTGCTCGATGCTGACATTGAGGACATGGGGGAGTGCTACCTCAAGCATGTAGAAAAGCCCATCCACAC
CTATCGCGTGGCACCGCCAGGCAAGGCGCCAACATTCGTCACCTTGCCAACCGACGACACCGAGCTGCGCCCCACGATTG
CCGTGATTCCGTTCACCGCCCGCACCTCGGACCCCGACCACGCGGTGCTGGGTGAAATACTGGCTGAAGAAATCATTGCG
GCCCTGTCGCGCACGCCGGACCTGAACGTCATTTCGCGTTTGTCGACCAGCGCCTTGCGCGGCCGTGACGCCAGTCTGCC
CGAGGTGCAAAACCACCTGCATGCCAGCTATGTGCTGTCGGGCGCCTATCGGGTGTTGGGCCAACAGCTGATTCTGGTGA
CCGAACTGATTGAAGCGCGCACCGGCCGGGCCGTGTGGGGCGACAGCCTGAAGAGCACGGTGCAGGAAGTGTTGCATGGC
GAAGACCGGATCACCGCAGAAGTGGTGTCGCAGTTGGGAGCCCAAATCGTGCGGACTGAAATGCAGCGCGCGGCCAGTCG
CCCCTTGCCCAACCTGGAAAGCTCCACGCTGTTGATGGGTGCGATTTCCCTGATGCACCGCTCCACCCGCAGCGAGTTTG
ACCGTGTGCGCGAGATGCTCGAGTACCTGATTGAGCGGCATCGCCGACTGCCTACACCCCGAGCCTGGCTGGCGAAATGG
CACGTGCTACAGGTCACACGCGGGCTATCTTCAGGTGGCAAGGACGAAACCAAACGGGCGCTGGAGCAGACCCAGCGGGC
GCTGGACGTCGACCCAGGCTGCTCGTTGGCGTTGGCCATTGAAGGATTCGTGCATTGCCACATGCTGAAGGATCTCGATG
GTGCCGCGCAGCGCTATGAGTCGGCGCTGGCGGCCAATCCGAACGATTCGCTGGCGTGGCTATTTTCTGGTGTATTGCAT
TCGTTTAGAGACGAAGGAGTCAAAGCGCTCGCAGCCAGCGACAGAGCCTTGAACCTGTCACCGCTCGATCCCATGCTGTA
CTTCTATCAGTCGCTAGCGGCCTCTGCAGCGCTCTCGGCCGGAGACTACAAGCGCGTGATCGAGCTAGCTACGGCGTCCC
TGCGCTCCAACAGAGGGCATACATCCACCTATCGGGTATTGGCCGTCGCGCAAACTCTGGATGGCAATTTGGACGAGGCG
AGAGCCACCGTCAAATCGCTGATGCTGCTGGAGCCAAACTTTACCGTGCAAAACTTTCTTCAACGTTCACCCAGCAGCAA
CTATGCGATAGGCCAGCTGTGCGCACAGGCGTTGCGGGATGCCGGCGTTCCGGAACAAATTTAA

Upstream 100 bases:

>100_bases
CGGAAGATGCGGTAATTCAGCGCTGAAAAACAACAGTGTGTGGCGCTCTGGAGGCGCAGCCACCCATTCAATGTTTCGTT
AGAGCGGTTCCTCCTCCAAA

Downstream 100 bases:

>100_bases
ATCAACACAAAAGGAAAAACAAATGAGTCAACTAGGCGGGTTCGGGGGATTTGGCGGCTTTGGAGGGTTTGGTGGCTTCG
GAGGGTTCGGGGGATTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQAEQQILPLHGGRIVKSLGDGL
MLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGGHLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRD
QLVPVLDADIEDMGECYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA
ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHG
EDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKW
HVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH
SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQTLDGNLDEA
RATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRDAGVPEQI

Sequences:

>Translated_607_residues
MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQAEQQILPLHGGRIVKSLGDGL
MLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGGHLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRD
QLVPVLDADIEDMGECYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA
ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHG
EDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKW
HVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH
SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQTLDGNLDEA
RATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRDAGVPEQI
>Mature_607_residues
MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQAEQQILPLHGGRIVKSLGDGL
MLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGGHLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRD
QLVPVLDADIEDMGECYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA
ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHG
EDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKW
HVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH
SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQTLDGNLDEA
RATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRDAGVPEQI

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 67085; Mature: 67085

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQA
CCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EQQILPLHGGRIVKSLGDGLMLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGG
HHHHCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
HLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRDQLVPVLDADIEDMGECYLKH
HHHHHHCCCCCEECCCCEEHHHEEECCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHH
VEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA
HHCHHHHEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH
ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEAR
HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGRAVWGDSLKSTVQEVLHGEDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMG
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKWHVLQVTRGLSSGGKDETKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGH
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
TSTYRVLAVAQTLDGNLDEARATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRD
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
AGVPEQI
CCCCCCC
>Mature Secondary Structure
MRRRIIVTPLTMSSSLIELPHFMHRSTKVLLVMDVVESVRLMEQDEHDFVQRWQQLVQQA
CCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EQQILPLHGGRIVKSLGDGLMLEFANAQSGVRAAFALQQFSQQANAGLRPEQQMHLRMGG
HHHHCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
HLASFVTDQHDIYGTDVNLTARFCTLAGPSEIVVSAELRDQLVPVLDADIEDMGECYLKH
HHHHHHCCCCCEECCCCEEHHHEEECCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHH
VEKPIHTYRVAPPGKAPTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIA
HHCHHHHEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH
ALSRTPDLNVISRLSTSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEAR
HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGRAVWGDSLKSTVQEVLHGEDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMG
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AISLMHRSTRSEFDRVREMLEYLIERHRRLPTPRAWLAKWHVLQVTRGLSSGGKDETKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LEQTQRALDVDPGCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLH
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
SFRDEGVKALAASDRALNLSPLDPMLYFYQSLAASAALSAGDYKRVIELATASLRSNRGH
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
TSTYRVLAVAQTLDGNLDEARATVKSLMLLEPNFTVQNFLQRSPSSNYAIGQLCAQALRD
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
AGVPEQI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]