| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is lnt [H]
Identifier: 91790046
GI number: 91790046
Start: 4426853
End: 4428499
Strand: Reverse
Name: lnt [H]
Synonym: Bpro_4208
Alternate gene names: 91790046
Gene position: 4428499-4426853 (Counterclockwise)
Preceding gene: 91790047
Following gene: 91790044
Centisome position: 85.16
GC content: 66.12
Gene sequence:
>1647_bases ATGGAGCCGAGTTCAATCCAAAGCATGATGTCTGCGCTGCCGACCTTGCCGGCGCTGCTGCAACACTTCGGTCAGACACC AACGCGCAGTCGCCTGTCGTGGCTCCAGTTCGTGATTGTTCTGGTCGCCGGCAGTGCTCATGCGGCCAGCCTCGCATGGC CGTTTCCCTTTGTCTTTGCGCAAGGCCAGCCCTTGTGGGGCCTGCAATTGCTGGCGCTGACGCTGCTGGCAGCGCAACTC GATGGCTGCCGGTCCTGGGGGCGCACCGCCTGGCTGGGCGGGACATTTTCCGCTGCCATGCTGTGCGGCACGTTCTGGTG GCTGTTCATCTCCATGCATGACTACGGCGGCCTGGCTGCGCCGCTGACGGTGCTGGCCATTGTGCTGCTGGCGGTGTTTC TGGGGCTGTACTATGCCGCCGCCGCTGCCTTGTTTGTCGTGCTGGCCCCCGCTCAGCGGGCGCAACGTGCATTGGTTTTT GCCGCGCTCTGGCTGCTGGCCGAGCTGGCCCGCGTGAAGCTGTTCACCGGCTTTCCCTGGGGAGAAGGCGGCTATGCCCA TGTGGACGGCTGGGCCAGGCCGCTGGCGGCGTGGGTCGGTGTGCACGGGCTGACCTTTCTGGCCGCGCTGGTGGCGGCCT CGCTGGCCGTGTGCCTGCGCGCGCGCAAGACCCGCTGGCTGGCAGCGATCAGCCTGGTTTTTGTCAGTGTGGCGGTGGCC TGGCTGCCGGCGACGGACGTAGCCTACGGCCAGGACCAGCCTCCCCTGCTGCCGGTGACGCTGCTGCAGGGCAACATTCC CCAGAACGAAAAATTCCAGCCGGGCACCGGTGTGGTCACGTCGCTGCGCTGGTACGGCGAGCAGTTGCGTGATGCGAAGA CCGCGCTGGTGGTCGCGCCTGAAACCGCCATTCCCCTGCTGCCGCAGCAACTGCCCCCTGGCTACTGGCAGGCCGTGCAG GGGCGTTTTGCCGTGGGTGAACAGGCCGCGCTGATAGGCATGCCGCTGGGCAATACCCAGACGGGTTACGCCAACTCGGT GCTGGGGCTCAAGCCGGCTTCATCAACGGGTTCATCGCCCAATCCCGCCCAGCCCTACCGGTATGACAAGCATCACCTGG TGCCGTTTGGCGAATTCATTCCACCGGGGTTCCGGTGGTTCACCAACATGATGAACATCCCGCTGGGTGACTTCAACCGC GGCACGGTGGTGCAGGCTTCCTTCGACTGGAAGGGCCAGCGGCTGGCTCCCAACATCTGCTACGAAGACCTGTTTGGCGA GGAGCTGGGCGCGCGCTTTACCGATCCGGCGCTGGCGCCCACCATGTTTGTCAACCTCAGCAACATTGCCTGGTTTGGCA ACACCGTGGCGATTGACCAGCACCTGCAGATCTCGCGCATGCGGGCACTGGAGTTCAGCCGGCCCATGCTTCGGGCCACC AACACCGGCGCCACCGCCATCATTGACCACCGCGGTCAGGTGACGCATGCGCTGCCGCGCCACACACGCGGTGCGCTGGT TGGCGAAGTGCAGGGGCGCAGCGGCATCACGCCCTATGCCTGGTGGGTGTCGCGCTATGGCCTGTGGCCGCTGTGGGCGC TGGGCCTGGGGATTGCGGGGCTGGCGCTGGTGCTGCGCCGCCGCTGA
Upstream 100 bases:
>100_bases TGCAATTCACGGTGCTGCACACCAAGGGTGGAGCCGTGCGCTGGTTCAAGGTGTCGCCTGTTGTGGCCAGGGCCTGAGCC CTCTGAAAAGAAAGGGACCG
Downstream 100 bases:
>100_bases GCCCTTCTCGCGATACGCGATATCCGGCCTGCTCAATGGCTGGACGCCATCACCCCGCGCAGCAAGTCTGGCAGCATGCC CAGCAGGCGCAAGGCGTCCT
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFAQGQPLWGLQLLALTLLAAQL DGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAAPLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVF AALWLLAELARVKLFTGFPWGEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAPETAIPLLPQQLPPGYWQAVQ GRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSPNPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNR GTVVQASFDWKGQRLAPNICYEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAGLALVLRRR
Sequences:
>Translated_548_residues MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFAQGQPLWGLQLLALTLLAAQL DGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAAPLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVF AALWLLAELARVKLFTGFPWGEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAPETAIPLLPQQLPPGYWQAVQ GRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSPNPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNR GTVVQASFDWKGQRLAPNICYEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAGLALVLRRR >Mature_548_residues MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFAQGQPLWGLQLLALTLLAAQL DGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAAPLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVF AALWLLAELARVKLFTGFPWGEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAPETAIPLLPQQLPPGYWQAVQ GRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSPNPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNR GTVVQASFDWKGQRLAPNICYEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAGLALVLRRR
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=455, Percent_Identity=33.4065934065934, Blast_Score=218, Evalue=8e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 59610; Mature: 59610
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFA CCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE QGQPLWGLQLLALTLLAAQLDGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHH PLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVFAALWLLAELARVKLFTGFPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC GEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAP HCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC ETAIPLLPQQLPPGYWQAVQGRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSP CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCC NPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNRGTVVQASFDWKGQRLAPNIC CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHH YEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT HHHHHHHHHCCCCCCCCCCHHHEEEECCCEEECCEEEECCHHHHHHHHHHHHCCCHHHCC NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAG CCCCEEEEECCCCHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHH LALVLRRR HHHHHHCC >Mature Secondary Structure MEPSSIQSMMSALPTLPALLQHFGQTPTRSRLSWLQFVIVLVAGSAHAASLAWPFPFVFA CCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE QGQPLWGLQLLALTLLAAQLDGCRSWGRTAWLGGTFSAAMLCGTFWWLFISMHDYGGLAA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHH PLTVLAIVLLAVFLGLYYAAAAALFVVLAPAQRAQRALVFAALWLLAELARVKLFTGFPW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC GEGGYAHVDGWARPLAAWVGVHGLTFLAALVAASLAVCLRARKTRWLAAISLVFVSVAVA CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLPATDVAYGQDQPPLLPVTLLQGNIPQNEKFQPGTGVVTSLRWYGEQLRDAKTALVVAP HCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC ETAIPLLPQQLPPGYWQAVQGRFAVGEQAALIGMPLGNTQTGYANSVLGLKPASSTGSSP CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCC NPAQPYRYDKHHLVPFGEFIPPGFRWFTNMMNIPLGDFNRGTVVQASFDWKGQRLAPNIC CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHH YEDLFGEELGARFTDPALAPTMFVNLSNIAWFGNTVAIDQHLQISRMRALEFSRPMLRAT HHHHHHHHHCCCCCCCCCCHHHEEEECCCEEECCEEEECCHHHHHHHHHHHHCCCHHHCC NTGATAIIDHRGQVTHALPRHTRGALVGEVQGRSGITPYAWWVSRYGLWPLWALGLGIAG CCCCEEEEECCCCHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHH LALVLRRR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA