Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91790029

Identifier: 91790029

GI number: 91790029

Start: 4404691

End: 4405065

Strand: Reverse

Name: 91790029

Synonym: Bpro_4191

Alternate gene names: NA

Gene position: 4405065-4404691 (Counterclockwise)

Preceding gene: 91790030

Following gene: 91790028

Centisome position: 84.71

GC content: 66.13

Gene sequence:

>375_bases
ATGCAGCACCTCGGTGCGCGGCTGCTGCGGGTGGAGGCCGGCTTGTGCGAAATTGCACTGCCTTACTCAGAACGTGTCAC
CCAGCAGCAGGGCGGCTTCCATGGCGGCGCCATGGGCGCGCTGGCAGACATTGCCGGCGGCTATGCCGCGCTGACGGTGG
CGCCTCCCGAGGCCGAAGTCACCACGGTCGAATACAAGATCAATTTTCTGGCCGCCTTCAGGGATGGTGAGCTCCGGGCA
ACCGGCCGTGTCGCCCGGGCCGGCAAGCGCATCATCGTGACCACCGCCGACGTGGTGCACGTCGACGCCAATGGCAAGGA
AAGCGCCTGCGCGCTGATGCAGCAGACGCTCGTTCCCGTGCCCAAGACCTACTGA

Upstream 100 bases:

>100_bases
CCCCCTCCACTCCCGAAAGAAGGCTTTCCCCATGGACGCACTTTCCGCGCCGTCAGCGCTTTTTCAGCGCATTGAAGCGA
GCTTTTTACGCCAGGGCATG

Downstream 100 bases:

>100_bases
CAACCCGCAAGAACCAGCCCGGTCGCCCCCATGCACCTGGCTACCTCTGTAACCTCCCGCGAAAGACGCCATCATGACCA
ACCTGCCAGGACTTGACTTC

Product: phenylacetic acid degradation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEVTTVEYKINFLAAFRDGELRA
TGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPVPKTY

Sequences:

>Translated_124_residues
MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEVTTVEYKINFLAAFRDGELRA
TGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPVPKTY
>Mature_124_residues
MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEVTTVEYKINFLAAFRDGELRA
TGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPVPKTY

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 13109; Mature: 13109

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEV
CCCHHHHHEEEECCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCE
TTVEYKINFLAAFRDGELRATGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPV
EEEEEEEEEEEEECCCCEEECCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCC
PKTY
CCCC
>Mature Secondary Structure
MQHLGARLLRVEAGLCEIALPYSERVTQQQGGFHGGAMGALADIAGGYAALTVAPPEAEV
CCCHHHHHEEEECCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCCE
TTVEYKINFLAAFRDGELRATGRVARAGKRIIVTTADVVHVDANGKESACALMQQTLVPV
EEEEEEEEEEEEECCCCEEECCHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCC
PKTY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]