| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789996
Identifier: 91789996
GI number: 91789996
Start: 4373407
End: 4374075
Strand: Reverse
Name: 91789996
Synonym: Bpro_4158
Alternate gene names: NA
Gene position: 4374075-4373407 (Counterclockwise)
Preceding gene: 91789997
Following gene: 91789995
Centisome position: 84.11
GC content: 62.78
Gene sequence:
>669_bases ATGAATCTCGACACCGCGCAACTGATCGCCTTGGCCGGTGTCCTGGGCTGGGCCAGCGGCGTGCGCCTGTACCTGGTGGT TTTCCTCACGGGCCTGGCCGGCTTCATGGGCTGGGTCACGCTGCCGCCAGGGTTGCAGATGCTGGCCCATCCGGTGGTGC TGGGTGTCAGCGGCTTCATGGTGTTCATGGAATTTTTTGCCGACAAGATTCCCGGCGTGGATTCGCTGTGGGACGTGGTG CATACCGTGATCCGGATTCCTGCCGGTGCGGCGCTTGCTGCCGGCGTCTTTGGCGCCGACAGCGGCATGATGGCGCTGAT CGCGGCCCTGCTAGGCGGCACGCTGGCGGCCACCAGTCACGCAGCCAAGGCCACCACGCGCGCCGCCATCAATACCTCCC CCGAGCCTTTCACCAACGTCGGCGCGTCGCTGCTCGAAGACGGTCTTGTGCCGCTGGGTTTGTGGTTGGCCATTGCCCAC CCGCTGGTGTTTGCGTTGATGCTCGCGCTGGTGCTGGTGGCCAGTGTCTGGCTGATTCGCATTTGCTGGCGCTTTTTAAT GCAGCTGTTTACCCGCGTCGCCCGCATTTTCAGCGGCAAGCCGGATCCGGGCCTGTCGCCTGCTTTTACCTTGAAGTCAC CCTTTTCAAAGAACGACCCACATGTTTAA
Upstream 100 bases:
>100_bases TGCTGATGCAGCCGATGAGCGCCGCGCCGGGCCGCCCCAAGCAAGCTCGCGCCCCCTCGGGGGGCAGCGTATTACACGAA GTGAAAAGCGTGGGGGCTCC
Downstream 100 bases:
>100_bases AAAAATTCTGATTGCCAATCGGGGCGAGATCGCCTGCCGCGTCGCCGCCACGGCCAGGCGCATGGCCATCAAAACCGTCG CGGTGTATTCGGATGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNLDTAQLIALAGVLGWASGVRLYLVVFLTGLAGFMGWVTLPPGLQMLAHPVVLGVSGFMVFMEFFADKIPGVDSLWDVV HTVIRIPAGAALAAGVFGADSGMMALIAALLGGTLAATSHAAKATTRAAINTSPEPFTNVGASLLEDGLVPLGLWLAIAH PLVFALMLALVLVASVWLIRICWRFLMQLFTRVARIFSGKPDPGLSPAFTLKSPFSKNDPHV
Sequences:
>Translated_222_residues MNLDTAQLIALAGVLGWASGVRLYLVVFLTGLAGFMGWVTLPPGLQMLAHPVVLGVSGFMVFMEFFADKIPGVDSLWDVV HTVIRIPAGAALAAGVFGADSGMMALIAALLGGTLAATSHAAKATTRAAINTSPEPFTNVGASLLEDGLVPLGLWLAIAH PLVFALMLALVLVASVWLIRICWRFLMQLFTRVARIFSGKPDPGLSPAFTLKSPFSKNDPHV >Mature_222_residues MNLDTAQLIALAGVLGWASGVRLYLVVFLTGLAGFMGWVTLPPGLQMLAHPVVLGVSGFMVFMEFFADKIPGVDSLWDVV HTVIRIPAGAALAAGVFGADSGMMALIAALLGGTLAATSHAAKATTRAAINTSPEPFTNVGASLLEDGLVPLGLWLAIAH PLVFALMLALVLVASVWLIRICWRFLMQLFTRVARIFSGKPDPGLSPAFTLKSPFSKNDPHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23391; Mature: 23391
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDTAQLIALAGVLGWASGVRLYLVVFLTGLAGFMGWVTLPPGLQMLAHPVVLGVSGFM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VFMEFFADKIPGVDSLWDVVHTVIRIPAGAALAAGVFGADSGMMALIAALLGGTLAATSH HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH AAKATTRAAINTSPEPFTNVGASLLEDGLVPLGLWLAIAHPLVFALMLALVLVASVWLIR HHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICWRFLMQLFTRVARIFSGKPDPGLSPAFTLKSPFSKNDPHV HHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MNLDTAQLIALAGVLGWASGVRLYLVVFLTGLAGFMGWVTLPPGLQMLAHPVVLGVSGFM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VFMEFFADKIPGVDSLWDVVHTVIRIPAGAALAAGVFGADSGMMALIAALLGGTLAATSH HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH AAKATTRAAINTSPEPFTNVGASLLEDGLVPLGLWLAIAHPLVFALMLALVLVASVWLIR HHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICWRFLMQLFTRVARIFSGKPDPGLSPAFTLKSPFSKNDPHV HHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA