| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is accA1 [H]
Identifier: 91789995
GI number: 91789995
Start: 4371423
End: 4373414
Strand: Reverse
Name: accA1 [H]
Synonym: Bpro_4157
Alternate gene names: 91789995
Gene position: 4373414-4371423 (Counterclockwise)
Preceding gene: 91789996
Following gene: 91789994
Centisome position: 84.1
GC content: 63.35
Gene sequence:
>1992_bases ATGTTTAAAAAAATTCTGATTGCCAATCGGGGCGAGATCGCCTGCCGCGTCGCCGCCACGGCCAGGCGCATGGCCATCAA AACCGTCGCGGTGTATTCGGATGCCGATGCGAACGCCAAGCATGTCGGCGTTTGCGACGAAGCCATTCACATTGGCGGCA GCGCACCCAAAGACAGCTACCTGCGCTGGGAGCGCATTATTGAAGCGGCCAAAGCCACGGGGGCGCAGGCGATTCATCCG GGCTATGGCTTCCTGAGCGAGAACGAGGAGTTTGCCCAGGCCTGTGCCCGCGCGGGCCTGGTCTTCATCGGCCCGCCCGC GTCGGCCATCAAGGCCATGGGCCTCAAAGCCGAGTCCAAGCAGCTCATGGAAAAGGCTGGCGTGCCGCTGGTGCCTGGCT ACCACGGCAGCGATCAGGACCCGGTGATGCTCAAGCACGAGGCCGACCGCATCGGCTACCCGGTACTGATCAAGGCCAGC GCGGGCGGCGGCGGCAAGGGCATGCGTGCGGTGGACAAGGCCGAAGACTTTGACGCGGCGCTGGCTTCCTGCAAGCGCGA GGCCATCAACAGCTTTGGCGATGATGCCGTGCTGGTGGAAAAATACGCGCAGCGGCCCCGGCATATTGAGATTCAGGTGT TCGGCGACACGCACGGCAACTACGTCTACCTGTTCGAACGCGACTGCTCGGTGCAGCGCCGCCACCAGAAGGTGCTGGAA GAGGCCCCCGCGCCCGGCATGACACCCGAGATGCGCCAGCAAATGGGGCTGGCCGCCGTGGCTGCCGCACGGGCCGTCAA TTACGTCGGGGCGGGCACGGTGGAGTTCATCGTCGAGCAGCGCGCCGACGGCAGCATGAATTTTTTCTTTATGGAGATGA ACACCCGGCTGCAGGTCGAGCACCCGGTGACCGAAGCCATTACCGGGCTGGACCTGGTCGAATGGCAGTTGCGCGTGGCC TCTGGCGAGAAACTGCCGCTGGCGCAAGAGCAGCTGCGCATCAACGGCCACGCCATCGAGGCGCGCATCTGCGCCGAAAA CCCCGACAACAACTTTTTGCCCGCCACCGGCACCTTGCATGTGTACCAGAAGCCGAACTGCAGCAGTTTCGAGCGCGGCC CGGTTCGCGTGGACGACGGGGTGCGCGAAGGCGATGCGATTTCACCGTTTTATGACTCGATGGTGGCCAAGTTGATCGTG CATGGCCAGACCCGTGAGGAAGCGCTGGCCCGGCTCGACGAGGCGCTGGCGCAAACCCATATCGTGGGCCTGAACACCAA TATGCAGTTTTTGCGCTACGTGCTGCGCAGCCCCTCGTTTGCCCAAGCCAACCTGGACACCGCGTTGATACCGCGCGAAG AGGCCGTGCTCTTCAAGCAGGAACCCGTGGGGCTGGCGATGGCCGCGGCCTGTGCGATTGCCCAGACGCTGCTGCAAGAA AAAGCCAGTGAAGACAGTGACCCTTTCAGTCGCCGTGACGGCTGGCAAACCCATGGCGTGACGCAGCGGCCTTTCGAGTT CGACTTCCGCGGCGAGCACTCCAAAGCGGCATTGACCTATCTGCATGACGGCGCCTTGCAATTAAAGGTGGGCAATGTGT CAGGGCCGCTGGTGTTTGCCGGAAGCGCACAAGGCATCGACATCCAGTTTGCGGGCCAGCGCCTGACGGCGGCGGTCTAT ACCCAGGGCGAGGTGGATTACGTCTTTACGGCAAGGGGCGCAACCCAGATCACGGCCATCGATCTGCTGGCCCATGCGGG CGAGAGTCACACGGAAGGCGGACGCCTGACGGCCCCCATGCCGGGCAAGGTCGTGTCCTTCGGCGTCAAGGCGGGTGACA AGGTCAGCAAGGGCCAGGCGCTCGCGGTGATGGAAGCCATGAAAATGGAGCATACGATTGCGGCGCCGGCCGACGGCGTG GTGCAGGAATTGCTCTACGCGCCGGGCGATCAGGTCGCCGAAGGCGCGGAATTGCTGAAAATAGCGGTTTGA
Upstream 100 bases:
>100_bases CAGCTGTTTACCCGCGTCGCCCGCATTTTCAGCGGCAAGCCGGATCCGGGCCTGTCGCCTGCTTTTACCTTGAAGTCACC CTTTTCAAAGAACGACCCAC
Downstream 100 bases:
>100_bases ATTTTCATGGATGAATCCGATGCGCATCAGTTTTTGCTGTACCGACACAAAAGCCCAGCCGTGGCTCGAAGGCCTGCGCG CCGCCCTGCCTGATTCGCAG
Product: 3-methylcrotonoyl-CoA carboxylase subunit alpha
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MFKKILIANRGEIACRVAATARRMAIKTVAVYSDADANAKHVGVCDEAIHIGGSAPKDSYLRWERIIEAAKATGAQAIHP GYGFLSENEEFAQACARAGLVFIGPPASAIKAMGLKAESKQLMEKAGVPLVPGYHGSDQDPVMLKHEADRIGYPVLIKAS AGGGGKGMRAVDKAEDFDAALASCKREAINSFGDDAVLVEKYAQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE EAPAPGMTPEMRQQMGLAAVAAARAVNYVGAGTVEFIVEQRADGSMNFFFMEMNTRLQVEHPVTEAITGLDLVEWQLRVA SGEKLPLAQEQLRINGHAIEARICAENPDNNFLPATGTLHVYQKPNCSSFERGPVRVDDGVREGDAISPFYDSMVAKLIV HGQTREEALARLDEALAQTHIVGLNTNMQFLRYVLRSPSFAQANLDTALIPREEAVLFKQEPVGLAMAAACAIAQTLLQE KASEDSDPFSRRDGWQTHGVTQRPFEFDFRGEHSKAALTYLHDGALQLKVGNVSGPLVFAGSAQGIDIQFAGQRLTAAVY TQGEVDYVFTARGATQITAIDLLAHAGESHTEGGRLTAPMPGKVVSFGVKAGDKVSKGQALAVMEAMKMEHTIAAPADGV VQELLYAPGDQVAEGAELLKIAV
Sequences:
>Translated_663_residues MFKKILIANRGEIACRVAATARRMAIKTVAVYSDADANAKHVGVCDEAIHIGGSAPKDSYLRWERIIEAAKATGAQAIHP GYGFLSENEEFAQACARAGLVFIGPPASAIKAMGLKAESKQLMEKAGVPLVPGYHGSDQDPVMLKHEADRIGYPVLIKAS AGGGGKGMRAVDKAEDFDAALASCKREAINSFGDDAVLVEKYAQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE EAPAPGMTPEMRQQMGLAAVAAARAVNYVGAGTVEFIVEQRADGSMNFFFMEMNTRLQVEHPVTEAITGLDLVEWQLRVA SGEKLPLAQEQLRINGHAIEARICAENPDNNFLPATGTLHVYQKPNCSSFERGPVRVDDGVREGDAISPFYDSMVAKLIV HGQTREEALARLDEALAQTHIVGLNTNMQFLRYVLRSPSFAQANLDTALIPREEAVLFKQEPVGLAMAAACAIAQTLLQE KASEDSDPFSRRDGWQTHGVTQRPFEFDFRGEHSKAALTYLHDGALQLKVGNVSGPLVFAGSAQGIDIQFAGQRLTAAVY TQGEVDYVFTARGATQITAIDLLAHAGESHTEGGRLTAPMPGKVVSFGVKAGDKVSKGQALAVMEAMKMEHTIAAPADGV VQELLYAPGDQVAEGAELLKIAV >Mature_663_residues MFKKILIANRGEIACRVAATARRMAIKTVAVYSDADANAKHVGVCDEAIHIGGSAPKDSYLRWERIIEAAKATGAQAIHP GYGFLSENEEFAQACARAGLVFIGPPASAIKAMGLKAESKQLMEKAGVPLVPGYHGSDQDPVMLKHEADRIGYPVLIKAS AGGGGKGMRAVDKAEDFDAALASCKREAINSFGDDAVLVEKYAQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE EAPAPGMTPEMRQQMGLAAVAAARAVNYVGAGTVEFIVEQRADGSMNFFFMEMNTRLQVEHPVTEAITGLDLVEWQLRVA SGEKLPLAQEQLRINGHAIEARICAENPDNNFLPATGTLHVYQKPNCSSFERGPVRVDDGVREGDAISPFYDSMVAKLIV HGQTREEALARLDEALAQTHIVGLNTNMQFLRYVLRSPSFAQANLDTALIPREEAVLFKQEPVGLAMAAACAIAQTLLQE KASEDSDPFSRRDGWQTHGVTQRPFEFDFRGEHSKAALTYLHDGALQLKVGNVSGPLVFAGSAQGIDIQFAGQRLTAAVY TQGEVDYVFTARGATQITAIDLLAHAGESHTEGGRLTAPMPGKVVSFGVKAGDKVSKGQALAVMEAMKMEHTIAAPADGV VQELLYAPGDQVAEGAELLKIAV
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=673, Percent_Identity=48.4398216939079, Blast_Score=615, Evalue=1e-176, Organism=Homo sapiens, GI65506442, Length=678, Percent_Identity=43.5103244837758, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI189095269, Length=678, Percent_Identity=43.5103244837758, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI295821183, Length=671, Percent_Identity=42.1758569299553, Blast_Score=441, Evalue=1e-123, Organism=Homo sapiens, GI106049528, Length=470, Percent_Identity=43.4042553191489, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI106049295, Length=470, Percent_Identity=43.4042553191489, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI106049292, Length=470, Percent_Identity=43.4042553191489, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI38679960, Length=732, Percent_Identity=29.7814207650273, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679977, Length=732, Percent_Identity=29.7814207650273, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679967, Length=732, Percent_Identity=29.7814207650273, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679974, Length=732, Percent_Identity=29.7814207650273, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI38679971, Length=732, Percent_Identity=29.7814207650273, Blast_Score=273, Evalue=5e-73, Organism=Homo sapiens, GI134142062, Length=723, Percent_Identity=29.7372060857538, Blast_Score=248, Evalue=2e-65, Organism=Escherichia coli, GI1789654, Length=442, Percent_Identity=48.4162895927602, Blast_Score=388, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71987519, Length=678, Percent_Identity=47.0501474926254, Blast_Score=538, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17567343, Length=687, Percent_Identity=41.7758369723435, Blast_Score=468, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17562816, Length=470, Percent_Identity=44.2553191489362, Blast_Score=356, Evalue=2e-98, Organism=Caenorhabditis elegans, GI133931226, Length=682, Percent_Identity=26.6862170087977, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI71997163, Length=740, Percent_Identity=25.9459459459459, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71997168, Length=707, Percent_Identity=25.8840169731259, Blast_Score=206, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6319685, Length=454, Percent_Identity=43.1718061674009, Blast_Score=398, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6319695, Length=459, Percent_Identity=42.2657952069717, Blast_Score=327, Evalue=6e-90, Organism=Saccharomyces cerevisiae, GI6321376, Length=459, Percent_Identity=42.483660130719, Blast_Score=317, Evalue=5e-87, Organism=Saccharomyces cerevisiae, GI6324343, Length=731, Percent_Identity=29.6853625170999, Blast_Score=273, Evalue=7e-74, Organism=Saccharomyces cerevisiae, GI6323863, Length=694, Percent_Identity=29.3948126801153, Blast_Score=271, Evalue=3e-73, Organism=Drosophila melanogaster, GI24651757, Length=684, Percent_Identity=45.7602339181287, Blast_Score=585, Evalue=1e-167, Organism=Drosophila melanogaster, GI24651759, Length=645, Percent_Identity=44.9612403100775, Blast_Score=535, Evalue=1e-152, Organism=Drosophila melanogaster, GI281363050, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652224, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652222, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652220, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652218, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652212, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652210, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652214, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI19921944, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI24652216, Length=470, Percent_Identity=45.1063829787234, Blast_Score=354, Evalue=1e-97, Organism=Drosophila melanogaster, GI161076407, Length=705, Percent_Identity=30.2127659574468, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24586460, Length=705, Percent_Identity=30.2127659574468, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24586458, Length=722, Percent_Identity=30.0554016620499, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI161076409, Length=705, Percent_Identity=30.2127659574468, Blast_Score=260, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 71520; Mature: 71520
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKILIANRGEIACRVAATARRMAIKTVAVYSDADANAKHVGVCDEAIHIGGSAPKDSY CCCEEEEECCCCEEEEEHHHHHHHHEEEEEEEECCCCCCCEEECCHHHHCCCCCCCCHHH LRWERIIEAAKATGAQAIHPGYGFLSENEEFAQACARAGLVFIGPPASAIKAMGLKAESK HHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHCCCHHHH QLMEKAGVPLVPGYHGSDQDPVMLKHEADRIGYPVLIKASAGGGGKGMRAVDKAEDFDAA HHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH LASCKREAINSFGDDAVLVEKYAQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHH EAPAPGMTPEMRQQMGLAAVAAARAVNYVGAGTVEFIVEQRADGSMNFFFMEMNTRLQVE HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCEEEEC HPVTEAITGLDLVEWQLRVASGEKLPLAQEQLRINGHAIEARICAENPDNNFLPATGTLH CCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHEECCEEEEEEEECCCCCCCCCCCCCEEE VYQKPNCSSFERGPVRVDDGVREGDAISPFYDSMVAKLIVHGQTREEALARLDEALAQTH EEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE IVGLNTNMQFLRYVLRSPSFAQANLDTALIPREEAVLFKQEPVGLAMAAACAIAQTLLQE EEEECCCHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH KASEDSDPFSRRDGWQTHGVTQRPFEFDFRGEHSKAALTYLHDGALQLKVGNVSGPLVFA HCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCEEEEEECCCCCCEEEE GSAQGIDIQFAGQRLTAAVYTQGEVDYVFTARGATQITAIDLLAHAGESHTEGGRLTAPM CCCCCEEEEECCCEEEEEEEECCCEEEEEEECCCCEEHHHHHHHHCCCCCCCCCEEECCC PGKVVSFGVKAGDKVSKGQALAVMEAMKMEHTIAAPADGVVQELLYAPGDQVAEGAELLK CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCHHHE IAV ECC >Mature Secondary Structure MFKKILIANRGEIACRVAATARRMAIKTVAVYSDADANAKHVGVCDEAIHIGGSAPKDSY CCCEEEEECCCCEEEEEHHHHHHHHEEEEEEEECCCCCCCEEECCHHHHCCCCCCCCHHH LRWERIIEAAKATGAQAIHPGYGFLSENEEFAQACARAGLVFIGPPASAIKAMGLKAESK HHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHCCCHHHH QLMEKAGVPLVPGYHGSDQDPVMLKHEADRIGYPVLIKASAGGGGKGMRAVDKAEDFDAA HHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH LASCKREAINSFGDDAVLVEKYAQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHH EAPAPGMTPEMRQQMGLAAVAAARAVNYVGAGTVEFIVEQRADGSMNFFFMEMNTRLQVE HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCEEEEC HPVTEAITGLDLVEWQLRVASGEKLPLAQEQLRINGHAIEARICAENPDNNFLPATGTLH CCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHEECCEEEEEEEECCCCCCCCCCCCCEEE VYQKPNCSSFERGPVRVDDGVREGDAISPFYDSMVAKLIVHGQTREEALARLDEALAQTH EEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE IVGLNTNMQFLRYVLRSPSFAQANLDTALIPREEAVLFKQEPVGLAMAAACAIAQTLLQE EEEECCCHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH KASEDSDPFSRRDGWQTHGVTQRPFEFDFRGEHSKAALTYLHDGALQLKVGNVSGPLVFA HCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCEEEEEECCCCCCEEEE GSAQGIDIQFAGQRLTAAVYTQGEVDYVFTARGATQITAIDLLAHAGESHTEGGRLTAPM CCCCCEEEEECCCEEEEEEEECCCEEEEEEECCCCEEHHHHHHHHCCCCCCCCCEEECCC PGKVVSFGVKAGDKVSKGQALAVMEAMKMEHTIAAPADGVVQELLYAPGDQVAEGAELLK CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCHHHE IAV ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]