Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789990

Identifier: 91789990

GI number: 91789990

Start: 4366069

End: 4367529

Strand: Direct

Name: 91789990

Synonym: Bpro_4152

Alternate gene names: NA

Gene position: 4366069-4367529 (Clockwise)

Preceding gene: 91789989

Following gene: 91790003

Centisome position: 83.96

GC content: 62.77

Gene sequence:

>1461_bases
ATGGAGCCAGCCCCAGACCCCGACCCGCGCCATGATTTCCAGGCCATGCACAGCCCGCTGAGTCAGATTGCACGGCGCGA
GCCGGTGACAGTCACGCTGGACACGCCGCTTGGCGAGGCGCTGGCGATCATGGACCGCATGCGCATCGGCTCCATCATCG
TGGTGGATGCCCAGGGACAAATGCCCCTGGGCATCTTCACGCTGCGCGACCTGCTGCACCGCGTGACGCTGCCACAGGTC
AATCTTGACCAGCCGATTGCCAGCGTCATGACCGGCGGTGTGATCACGGTCAAACCACACACCACCGCCTATGAGGCCCC
GCTCATCATGGCCCGACGCGGCCTGCGCCATCTGCTGATGGTGGATGAGGCCGGACACCTGGTCTCCATCGTGTCGCAAA
ACGATTTGTTTGCCTTGCAGCGCACCAGCATCAAGGATGTCAGCAACGACATCCGCCAGGCCCGCGATCTGCCGAGCCTG
CAGGCCTGCGCCAAGGACATCCAGCGCATCGCCCTGGCTTTGCTCACGCAGGGCATGGCAGCGGGGCAACTAACGCTGTT
CGTCTCCACGCTCAACGACCTGCTGACCCTGCGCGTGATTGAACTCACCCACGATGAATTTGACCTGCCGCAAGTCAGGT
GGTGCTGGCTCGCGCTGGGCTCCGAGGGGCGCTATGAGCAAACGCTGTGCACCGATCAGGACAACGGCATCATTTTCGCG
TGCGAGAACGAAGCGGCCACCGAAGCGCTGCGTCAGCGCTTCCTGCCCTTTGCCCAGGCGGTCAACCACAAGCTTGATGC
CTGCGGTTTTCCGCTCTGCAAGGGCGGCATCATGGCGGGCAACCCGCAATGGTGCCTGTCCCTGCCCGAATGGCGCGCCA
GGTTCACCGCCTGGATTGAGCACCCGCAACCCAAGGCCTTGCTCAACGCCGCGATTTTTTTCGACTTTCGCCCCCTCTAT
GGCGACGAGAGCCTCAGCGACACCCTGCGCACCTGGCTACTCGATCAGACCCGCAACGCGCAACTGTTCCTGCGCCTGAT
GACCGAAAATGCGCTGCAATGCGCGCCACCGTTGGGCCTGATTCGCGATTTCGTATTCGACGGCGACAAGGACTTCCCCC
ACACCATCAACCTCAAGACATATGGCTCCAGGCCCTTTGTCGATGCGGCGCGCCTGCTCTCACTCGCGCACGGGGTACGG
CAGACCAGCACCGCGCAACGCCTGCTGGCCGCTTCCCGGGCCGTGAACTTCGGCGGCGACGATGTGGCGGCCATCGTGGA
CAGCTTTTACTACATCCAGCTGCTGCGATTGCGCCACCAGCATCAGGTTCTGGACGCATCAGGCGGGGGCAACCGCATCA
ACCCCGACCTGTTGAATGAACTCGATCGCCACATCCTGAAGGAAGCCTTCAAGCAGGCGCGCAAGCTGCAAAGCCGACTC
AAACTCGACTACCGGCTATAG

Upstream 100 bases:

>100_bases
ATTCCCTTGCTGGCGCAACAGAACATTCACACCTTGCGCCAGGCACGCGAGGCGGCCGCGCGCACCTATTACGCCAGAGT
CAGTTACTAAAGGTGACATC

Downstream 100 bases:

>100_bases
CGAGCTACAACGGGCTATAGCGCGAAATGGGCTCAGGACGGTCGACGCACAGCACCCGTTTTGACCGCGCCGACGCCCTC
CCAATGCCCTTGCGCAAACC

Product: signal-transduction protein

Products: NA

Alternate protein names: OrfX [H]

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MEPAPDPDPRHDFQAMHSPLSQIARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQMPLGIFTLRDLLHRVTLPQV
NLDQPIASVMTGGVITVKPHTTAYEAPLIMARRGLRHLLMVDEAGHLVSIVSQNDLFALQRTSIKDVSNDIRQARDLPSL
QACAKDIQRIALALLTQGMAAGQLTLFVSTLNDLLTLRVIELTHDEFDLPQVRWCWLALGSEGRYEQTLCTDQDNGIIFA
CENEAATEALRQRFLPFAQAVNHKLDACGFPLCKGGIMAGNPQWCLSLPEWRARFTAWIEHPQPKALLNAAIFFDFRPLY
GDESLSDTLRTWLLDQTRNAQLFLRLMTENALQCAPPLGLIRDFVFDGDKDFPHTINLKTYGSRPFVDAARLLSLAHGVR
QTSTAQRLLAASRAVNFGGDDVAAIVDSFYYIQLLRLRHQHQVLDASGGGNRINPDLLNELDRHILKEAFKQARKLQSRL
KLDYRL

Sequences:

>Translated_486_residues
MEPAPDPDPRHDFQAMHSPLSQIARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQMPLGIFTLRDLLHRVTLPQV
NLDQPIASVMTGGVITVKPHTTAYEAPLIMARRGLRHLLMVDEAGHLVSIVSQNDLFALQRTSIKDVSNDIRQARDLPSL
QACAKDIQRIALALLTQGMAAGQLTLFVSTLNDLLTLRVIELTHDEFDLPQVRWCWLALGSEGRYEQTLCTDQDNGIIFA
CENEAATEALRQRFLPFAQAVNHKLDACGFPLCKGGIMAGNPQWCLSLPEWRARFTAWIEHPQPKALLNAAIFFDFRPLY
GDESLSDTLRTWLLDQTRNAQLFLRLMTENALQCAPPLGLIRDFVFDGDKDFPHTINLKTYGSRPFVDAARLLSLAHGVR
QTSTAQRLLAASRAVNFGGDDVAAIVDSFYYIQLLRLRHQHQVLDASGGGNRINPDLLNELDRHILKEAFKQARKLQSRL
KLDYRL
>Mature_486_residues
MEPAPDPDPRHDFQAMHSPLSQIARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQMPLGIFTLRDLLHRVTLPQV
NLDQPIASVMTGGVITVKPHTTAYEAPLIMARRGLRHLLMVDEAGHLVSIVSQNDLFALQRTSIKDVSNDIRQARDLPSL
QACAKDIQRIALALLTQGMAAGQLTLFVSTLNDLLTLRVIELTHDEFDLPQVRWCWLALGSEGRYEQTLCTDQDNGIIFA
CENEAATEALRQRFLPFAQAVNHKLDACGFPLCKGGIMAGNPQWCLSLPEWRARFTAWIEHPQPKALLNAAIFFDFRPLY
GDESLSDTLRTWLLDQTRNAQLFLRLMTENALQCAPPLGLIRDFVFDGDKDFPHTINLKTYGSRPFVDAARLLSLAHGVR
QTSTAQRLLAASRAVNFGGDDVAAIVDSFYYIQLLRLRHQHQVLDASGGGNRINPDLLNELDRHILKEAFKQARKLQSRL
KLDYRL

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 54445; Mature: 54445

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAPDPDPRHDFQAMHSPLSQIARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC
MPLGIFTLRDLLHRVTLPQVNLDQPIASVMTGGVITVKPHTTAYEAPLIMARRGLRHLLM
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHEEE
VDEAGHLVSIVSQNDLFALQRTSIKDVSNDIRQARDLPSLQACAKDIQRIALALLTQGMA
ECCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AGQLTLFVSTLNDLLTLRVIELTHDEFDLPQVRWCWLALGSEGRYEQTLCTDQDNGIIFA
CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCEEEE
CENEAATEALRQRFLPFAQAVNHKLDACGFPLCKGGIMAGNPQWCLSLPEWRARFTAWIE
ECCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCCCHHEECCHHHHHHHHHHHC
HPQPKALLNAAIFFDFRPLYGDESLSDTLRTWLLDQTRNAQLFLRLMTENALQCAPPLGL
CCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCHHH
IRDFVFDGDKDFPHTINLKTYGSRPFVDAARLLSLAHGVRQTSTAQRLLAASRAVNFGGD
HHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DVAAIVDSFYYIQLLRLRHQHQVLDASGGGNRINPDLLNELDRHILKEAFKQARKLQSRL
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLDYRL
CCCCCC
>Mature Secondary Structure
MEPAPDPDPRHDFQAMHSPLSQIARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC
MPLGIFTLRDLLHRVTLPQVNLDQPIASVMTGGVITVKPHTTAYEAPLIMARRGLRHLLM
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHEEE
VDEAGHLVSIVSQNDLFALQRTSIKDVSNDIRQARDLPSLQACAKDIQRIALALLTQGMA
ECCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AGQLTLFVSTLNDLLTLRVIELTHDEFDLPQVRWCWLALGSEGRYEQTLCTDQDNGIIFA
CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCEEEE
CENEAATEALRQRFLPFAQAVNHKLDACGFPLCKGGIMAGNPQWCLSLPEWRARFTAWIE
ECCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCCCHHEECCHHHHHHHHHHHC
HPQPKALLNAAIFFDFRPLYGDESLSDTLRTWLLDQTRNAQLFLRLMTENALQCAPPLGL
CCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCHHH
IRDFVFDGDKDFPHTINLKTYGSRPFVDAARLLSLAHGVRQTSTAQRLLAASRAVNFGGD
HHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DVAAIVDSFYYIQLLRLRHQHQVLDASGGGNRINPDLLNELDRHILKEAFKQARKLQSRL
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLDYRL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014; 8522533 [H]