| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yliJ [C]
Identifier: 91790003
GI number: 91790003
Start: 4381291
End: 4381968
Strand: Direct
Name: yliJ [C]
Synonym: Bpro_4165
Alternate gene names: 91790003
Gene position: 4381291-4381968 (Clockwise)
Preceding gene: 91789990
Following gene: 91790006
Centisome position: 84.25
GC content: 68.73
Gene sequence:
>678_bases ATGATCACACTTCACCACTGCATGAGCGCCCGCTCGTTCCGCCCCCTGTGGGTGCTGGAAGAACTCGGCCTGCCCTACAC GCTGAAGATGCTGCCCTTCCCGCCCCGGGCCTTGGCGCGGGACTATCTTGAGATCAATCCCCTGGGCACGGTGCCGCTGC TTGAAGACGGGGAACTGCGCATGAGCGAGTCGGTTGCCATCTGCCAGTACCTCGTGGCGCGGCAGGCCCAACAGGCCCCC ACGCCGCTGAACGTGGCGGTGACCGAGCCCGGCTTCGGCAGTTGGCTGAACTGGCTGCATTTCGGCGAGGCCACCCTGAC CTTTCCGCAAACCCTGGTCCTGCGCTACTCGCGCTTCGAGCCCGCGCGTTCGCTGCAGGCGGTGGCGGACGACTACACGC GCTGGTTCCTGGCCCGGCTGCGCGTGCTGGATGGCGCGCTGGCACAGCAGCCGTTTCTCTGCGCCGGGCGCTTCACCGCC GCCGACGTCTCAGTGGGCTATGCGCTCATGCTCGCGGAGCATCTGGCGCTGGAGCCGCGCTTCTCGCCTGCGGTGCGCGA CTACTGGCAGCGACTGAACAGCCGCGAGGCCTTCCAGCGCGCGATGAAGGCCCAGTGGCAGGCGGCCGTGGACCAGGGCG TATCCACCGTCGCGGCGCCGGACACACGCCCGGCGTGA
Upstream 100 bases:
>100_bases GCTGCGGTTTGCGCCTTGCCTTGACCAAAAATCCATCATTTTTATTTGTGCCATCAAGCATGCAACACCACACTAGACTG CAAATGAACGGAATGCCCAC
Downstream 100 bases:
>100_bases CCATCGCTCCCGCCCACGCTCAGTGGCGGAAACAGGCTTCATGCCTGCGAGCCTGGGAGGGTTTGAGGTGGCAGGATGCG GCCCCGCCTCCAGCCACCAA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione Transferase; Glutathione S-Transferase III; Glutathione S-Transferase Domain; Glutathione S-Transferase Protein; Glutathione S Transferase; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain; Gst Protein
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MITLHHCMSARSFRPLWVLEELGLPYTLKMLPFPPRALARDYLEINPLGTVPLLEDGELRMSESVAICQYLVARQAQQAP TPLNVAVTEPGFGSWLNWLHFGEATLTFPQTLVLRYSRFEPARSLQAVADDYTRWFLARLRVLDGALAQQPFLCAGRFTA ADVSVGYALMLAEHLALEPRFSPAVRDYWQRLNSREAFQRAMKAQWQAAVDQGVSTVAAPDTRPA
Sequences:
>Translated_225_residues MITLHHCMSARSFRPLWVLEELGLPYTLKMLPFPPRALARDYLEINPLGTVPLLEDGELRMSESVAICQYLVARQAQQAP TPLNVAVTEPGFGSWLNWLHFGEATLTFPQTLVLRYSRFEPARSLQAVADDYTRWFLARLRVLDGALAQQPFLCAGRFTA ADVSVGYALMLAEHLALEPRFSPAVRDYWQRLNSREAFQRAMKAQWQAAVDQGVSTVAAPDTRPA >Mature_225_residues MITLHHCMSARSFRPLWVLEELGLPYTLKMLPFPPRALARDYLEINPLGTVPLLEDGELRMSESVAICQYLVARQAQQAP TPLNVAVTEPGFGSWLNWLHFGEATLTFPQTLVLRYSRFEPARSLQAVADDYTRWFLARLRVLDGALAQQPFLCAGRFTA ADVSVGYALMLAEHLALEPRFSPAVRDYWQRLNSREAFQRAMKAQWQAAVDQGVSTVAAPDTRPA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25332; Mature: 25332
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLHHCMSARSFRPLWVLEELGLPYTLKMLPFPPRALARDYLEINPLGTVPLLEDGELR CEEHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC MSESVAICQYLVARQAQQAPTPLNVAVTEPGFGSWLNWLHFGEATLTFPQTLVLRYSRFE HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC PARSLQAVADDYTRWFLARLRVLDGALAQQPFLCAGRFTAADVSVGYALMLAEHLALEPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCC FSPAVRDYWQRLNSREAFQRAMKAQWQAAVDQGVSTVAAPDTRPA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC >Mature Secondary Structure MITLHHCMSARSFRPLWVLEELGLPYTLKMLPFPPRALARDYLEINPLGTVPLLEDGELR CEEHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC MSESVAICQYLVARQAQQAPTPLNVAVTEPGFGSWLNWLHFGEATLTFPQTLVLRYSRFE HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC PARSLQAVADDYTRWFLARLRVLDGALAQQPFLCAGRFTAADVSVGYALMLAEHLALEPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCC FSPAVRDYWQRLNSREAFQRAMKAQWQAAVDQGVSTVAAPDTRPA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA