| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yjcG [C]
Identifier: 91789982
GI number: 91789982
Start: 4356922
End: 4359039
Strand: Reverse
Name: yjcG [C]
Synonym: Bpro_4144
Alternate gene names: 91789982
Gene position: 4359039-4356922 (Counterclockwise)
Preceding gene: 91789983
Following gene: 91789980
Centisome position: 83.82
GC content: 61.8
Gene sequence:
>2118_bases ATGGGAATGTTTGGCGCCGCAAATCAGTCGCAGAGCGACTTCAAGAAAGGCCTGCACAAGGTCTACGGGTGGTACACGGG AGGCTTCATCGGTTTTGTGATCGTGCTGGCGATCCTGGAGCAGCTGGGGCTACCGAAGAACTGGATCGGTTACCTGTTCC TGGCCGCGACGGTGCTGCTGTATGCGGGCATCGGGGTCATGAGCCGCACCAGCGATGCGGCCGAATACTACGTGGCCGGG CGTCGCGTGCCCGCCATGTACAACGGCATGGCCACCGGGGCGGACTGGATGTCGGCGGCCTCCTTCATTGGCATGGCCGG CACGCTGTACCTGACCGGTTACGGGGGGCTGGCCTTTATTCTGGGCTGGACCGGCGGCTACTGCCTGGTGGCGCTTTTTC TGGCGCCTTACCTGCGCAAGTTTGGCCAGTTCACCATTCCAGACTTTTTGGGCGCACGCTATGAGGGCAACCTGCCGCGC CTGATTGGTGTGTTCGCCGCCATTCTGTGCTCCTTCACCTACGTGGTGGCGCAGATCTATGGCGTGGGCCTGATCACTGC GCGTCTGACCGGACTGGCATTCGAGATCGGTATCTTTGCCGGTCTGGGCGGCATTCTGGTGTGCTCGTTCCTCGGCGGCA TGCGTGCCGTGACCTGGACCCAGGTGGCGCAGTACGTGATTCTCATCATTGCCTACCTGCTGCCGGTGATCTGGCTGTCG GTCAAGCACACCGGCGTGCCGGTTCCGCAGGCGGTCTATGGCTACACGCTTCAGAAGGTGACAGCCAAGGAAGAACAGTT GCTGAAGGACCCGAAAGAGCTCGAAGTACGTGATCTCTTCAAGGCGCGTTCGGAAGCGGCTGTTGCCAAACTGAAGGACG TTCCCGCTGCCATGGCTGCCGACAAGGCCGCCGCGCAGAAGAGGCTGGACGACCTGAAAGCTGCGAACGGCGCTGTGGCC GACATCCGGGCCGCTGAGGCAGCCTTGGCAGGACTGCCCAAGGATGAGGCTGCGGCCAGGGCTGCCTACACTGCCGCGCG TGTCGGGAACGCCGCACGGTCTGCGCCACCGATTCGTCATGCCCAACCCTTCCCGGGCAAGGATGAAGCTGCGCAGGATA TTTCGCGCAAAAACTTCCTGGCGCTGGTGTTCTGCCTGATGATCGGTACCGCCGCACTGCCGCACATCCTGATGCGTTAC TACACCGTGCCTTCGGTGAAGGAAGCGCGTCAGTCGGTGAGCTGGTCGCTGTTCTTCATCTTCCTGCTCTACTTCACGGC GCCGGCGCTGGCGGTGATGGCCAAATATGAGGTGTACACCGTGCTGGTGAACACGCCGTTTGACAGTTTGCCAGGCTGGA TCGCGCGCTGGAACGCCGTCGACCCGACCTTGTTGTCGGTGGTGGACATCAACAAGGACGGCATCCTGCAGCTGGCCGAA ATCAGCATTGGTGGCGACATCATTGTGTTGGCCACGCCTGAGATTGGCGGGCTGCCCTACGTGGTGTCGGGCATGGTGGC TGCGGGTGGTCTGGCGGCTGCGCTGTCTACCGCGGATGGTTTGCTGCTGACGATTGCCAACGCGCTGTCGCATGATCTGT ACTACAAGGTGCTGGATCCGAATGCGTCTACCGCACGCCGTGTGATGGTGTCCAAGGTGCTGTTGCTGGTTGTTGCCTTG TGTGCGGCCTATGTGGCGGCCCAGAAGCCAGCGGACATCCTGTTCCTGGTGTCGGCTGCGTTCTCGTTCGCCGCGGCGGC ATTCTTCCCTGCGCTGACTCTGGGCATCTTCTGGAAGCGCGCCAACAAGTGGGGTGCCTCGCTGGGCATGATCGCAGGCT TGGGCACCACCTTCTACTACATGATGACCACCCAGCCATGGCTCTACAAGCTGACCCACAGCGGAGCCGCCATCACGCCT GAAATCCTCAAGGCCAATACATGGTGGGATATTGCCCCGATCTCGGCCGGCCTGTTTGGTGTGCCGCTGGGCTTTGCAGT AATCATCGTTGTGTCGCTGCTGACCAAGGCCCCGGGCAAGGACGTTCAGGAGCTGGTGGAGCATGTGCGTTACCCCAGCC TGGATGGCAAGGTTGCCGCTGCCGGTGCCGGCCACTGA
Upstream 100 bases:
>100_bases CGCAAGGGGCTCTGGTGGTGTACTGCGTGATCATCTGGTTCTACGCGCGCTACATGAACAACCTGGACAACGAATACGGC GTGGCCGAAGGAGAAGAATA
Downstream 100 bases:
>100_bases GCACGGTCGCAGCTGAATCAAAAACCCCGCCTTGGCGGGGTTTTTTACGGAGTCTTCTCGCCGGGACTGGTCGGGCTAGG AGCAATACAGTTCAGTAAGT
Product: Na+/solute symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MGMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLLYAGIGVMSRTSDAAEYYVAG RRVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFILGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPR LIGVFAAILCSFTYVVAQIYGVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLS VKHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAADKAAAQKRLDDLKAANGAVA DIRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRHAQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRY YTVPSVKEARQSVSWSLFFIFLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAE ISIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDPNASTARRVMVSKVLLLVVAL CAAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKRANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITP EILKANTWWDIAPISAGLFGVPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH
Sequences:
>Translated_705_residues MGMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLLYAGIGVMSRTSDAAEYYVAG RRVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFILGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPR LIGVFAAILCSFTYVVAQIYGVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLS VKHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAADKAAAQKRLDDLKAANGAVA DIRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRHAQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRY YTVPSVKEARQSVSWSLFFIFLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAE ISIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDPNASTARRVMVSKVLLLVVAL CAAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKRANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITP EILKANTWWDIAPISAGLFGVPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH >Mature_704_residues GMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLLYAGIGVMSRTSDAAEYYVAGR RVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFILGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPRL IGVFAAILCSFTYVVAQIYGVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLSV KHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAADKAAAQKRLDDLKAANGAVAD IRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRHAQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRYY TVPSVKEARQSVSWSLFFIFLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAEI SIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDPNASTARRVMVSKVLLLVVALC AAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKRANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITPE ILKANTWWDIAPISAGLFGVPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Escherichia coli, GI1790503, Length=205, Percent_Identity=29.7560975609756, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 75244; Mature: 75113
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00018 EF_HAND_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YAGIGVMSRTSDAAEYYVAGRRVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFI HHCCCHHCCCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH LGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPRLIGVFAAILCSFTYVVAQIY HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VKHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH DKAAAQKRLDDLKAANGAVADIRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCC AQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRYYTVPSVKEARQSVSWSLFFI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAE HHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHCCCCCCCHHEEEEECCCCCCEEEEE ISIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDP EECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECC NASTARRVMVSKVLLLVVALCAAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITPEILKANTWWDIAPISAGLFG HHHHCCHHHHHHHHHHHEEEEEECCCHHEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHH VPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GMFGAANQSQSDFKKGLHKVYGWYTGGFIGFVIVLAILEQLGLPKNWIGYLFLAATVLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YAGIGVMSRTSDAAEYYVAGRRVPAMYNGMATGADWMSAASFIGMAGTLYLTGYGGLAFI HHCCCHHCCCCHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH LGWTGGYCLVALFLAPYLRKFGQFTIPDFLGARYEGNLPRLIGVFAAILCSFTYVVAQIY HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVGLITARLTGLAFEIGIFAGLGGILVCSFLGGMRAVTWTQVAQYVILIIAYLLPVIWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VKHTGVPVPQAVYGYTLQKVTAKEEQLLKDPKELEVRDLFKARSEAAVAKLKDVPAAMAA HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH DKAAAQKRLDDLKAANGAVADIRAAEAALAGLPKDEAAARAAYTAARVGNAARSAPPIRH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCC AQPFPGKDEAAQDISRKNFLALVFCLMIGTAALPHILMRYYTVPSVKEARQSVSWSLFFI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FLLYFTAPALAVMAKYEVYTVLVNTPFDSLPGWIARWNAVDPTLLSVVDINKDGILQLAE HHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHCCCCCCCHHEEEEECCCCCCEEEEE ISIGGDIIVLATPEIGGLPYVVSGMVAAGGLAAALSTADGLLLTIANALSHDLYYKVLDP EECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECC NASTARRVMVSKVLLLVVALCAAYVAAQKPADILFLVSAAFSFAAAAFFPALTLGIFWKR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANKWGASLGMIAGLGTTFYYMMTTQPWLYKLTHSGAAITPEILKANTWWDIAPISAGLFG HHHHCCHHHHHHHHHHHEEEEEECCCHHEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHH VPLGFAVIIVVSLLTKAPGKDVQELVEHVRYPSLDGKVAAAGAGH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]