| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789979
Identifier: 91789979
GI number: 91789979
Start: 4353281
End: 4353760
Strand: Reverse
Name: 91789979
Synonym: Bpro_4141
Alternate gene names: NA
Gene position: 4353760-4353281 (Counterclockwise)
Preceding gene: 91789980
Following gene: 91789977
Centisome position: 83.72
GC content: 64.79
Gene sequence:
>480_bases ATGATTTATGGAAAGACCGAGTTGGGTCAGTCTGCCCTGCAGAGCCGCTCGCTGGCGCTGCTGCCGCGGCAGCGTTCGGC ATTCATCATGTTCGACGGCAAGCGCCGCACCGACGATGTTCTGAAGGCAACGGCCGGCCTGGGGGTCACTTCGGATGATG TCAATCACCTGGTGGCGTTGGGTCTGCTGGCCGTTATCGCGGGCGCCGCGCCCGCCGTGTCGGCACCGCCCCGGGCCGCG TCTGTGGCCGCCGCGCAAAAACCCGACGGAACACCGACCCAGAATGCGCAGGAACATTATTCAAGGGCCTATCCAGTGGC CACGCGGCTCACGGCCGGACTGGGGTTGCGGGGCTTTCGGCTCAACCTCGCAGTAGAAGCCGCCGGCGACCTGGAGAAGC TGAAGGAGTTGGCACCGCGAATTCAGGAGGCCGTGGGTGCCGAGAAATTCAGGGAGCTGGAGCGCGCCCTGTATGACTGA
Upstream 100 bases:
>100_bases AATCCACCGGCGAATGGCGGAACAGCCATACACAACAAGCGCTTGAAGCACCGGCACTGCGTGGTTTCGGATCAAGAGCG CATCCAGCGGAGACATGCTG
Downstream 100 bases:
>100_bases GGCCGCGACGGCGAGTGGCGCTACCGTGCTCCGGGCATGACAGGGCCCCGTCTCGACATGATGCCGGGGCGTTCACCTCA GCGCTTGAATTTCCCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MIYGKTELGQSALQSRSLALLPRQRSAFIMFDGKRRTDDVLKATAGLGVTSDDVNHLVALGLLAVIAGAAPAVSAPPRAA SVAAAQKPDGTPTQNAQEHYSRAYPVATRLTAGLGLRGFRLNLAVEAAGDLEKLKELAPRIQEAVGAEKFRELERALYD
Sequences:
>Translated_159_residues MIYGKTELGQSALQSRSLALLPRQRSAFIMFDGKRRTDDVLKATAGLGVTSDDVNHLVALGLLAVIAGAAPAVSAPPRAA SVAAAQKPDGTPTQNAQEHYSRAYPVATRLTAGLGLRGFRLNLAVEAAGDLEKLKELAPRIQEAVGAEKFRELERALYD >Mature_159_residues MIYGKTELGQSALQSRSLALLPRQRSAFIMFDGKRRTDDVLKATAGLGVTSDDVNHLVALGLLAVIAGAAPAVSAPPRAA SVAAAQKPDGTPTQNAQEHYSRAYPVATRLTAGLGLRGFRLNLAVEAAGDLEKLKELAPRIQEAVGAEKFRELERALYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16881; Mature: 16881
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYGKTELGQSALQSRSLALLPRQRSAFIMFDGKRRTDDVLKATAGLGVTSDDVNHLVAL CCCCCCHHHHHHHHHCCHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHH GLLAVIAGAAPAVSAPPRAASVAAAQKPDGTPTQNAQEHYSRAYPVATRLTAGLGLRGFR HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCEE LNLAVEAAGDLEKLKELAPRIQEAVGAEKFRELERALYD EEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MIYGKTELGQSALQSRSLALLPRQRSAFIMFDGKRRTDDVLKATAGLGVTSDDVNHLVAL CCCCCCHHHHHHHHHCCHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHH GLLAVIAGAAPAVSAPPRAASVAAAQKPDGTPTQNAQEHYSRAYPVATRLTAGLGLRGFR HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCEE LNLAVEAAGDLEKLKELAPRIQEAVGAEKFRELERALYD EEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA