Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789916

Identifier: 91789916

GI number: 91789916

Start: 4286867

End: 4288060

Strand: Direct

Name: 91789916

Synonym: Bpro_4077

Alternate gene names: NA

Gene position: 4286867-4288060 (Clockwise)

Preceding gene: 91789915

Following gene: 91789917

Centisome position: 82.44

GC content: 60.64

Gene sequence:

>1194_bases
ATGAAACTCAAGACTCTTATCGCCGCCATGGCCATCGGCCTGGGCGCCGCCGCTTCGGCCCAGAACACGGGACCGGTCAA
GATCGGCTTCATCACCGACATGTCCAGCCTCTACGCGGACATCGACGGCCCGGCCGGCGGTGAAATGATCAGGTGGGCGG
CCCAGGACTTCGGCGGCAAGGTGCTGGGACGCCCGATTGAAGTGCTGACGGCCGACCACCAGAACAAGGCCGACGTGGCC
AGCTCCAAGGCCCGCGAGTGGATCGACAAGGACGGCCTGTCCGCGCTGATCGGCGGCACCAATTCGGGCACGGCACTGGC
CATGTCCAAGGTCGCGACTGAAAAGAAACGCCCTTTCATCGTGATTGGGGCTGGCTCTGCCCGCCTGACCAATGAAGATT
GCACGCCCTACACCATTCATTACGCCTACGACACGGTGGCGCTGGCCAAGGTCGCTGGCTCGGCGCTGGTCAAGGCCGGC
GCCAAGAACTGGTTCTTCCTGACCGCTGACTACGCCTTTGGCCATTCGCTGGAGTCCGATTCCGCCACGGTCGTGAAGGC
CAACGGCGGTACCGTGGTGGGCACGGTGCGGCATCCGCTGAACGCTTCCGACTTCTCGGCCTTCCTGCTGCAGGCGCAAA
CTTCCAAGGCGCAAATCCTGGGTCTGGCCAATGCCGGCGGTGACTTCACCAACGCCATGAAAGCGGCCAAAGAGTTCGGC
ATCACCAAAAGCATGAAGATTGCCGGTCTGCTGGTGTTTATCAACGACGTGCACAGCCTGGGCCTGGCCAACACCGAAGG
CCTGCAACTGGCCGACAGCTGGTACTGGAACCAGGACGACGCATCACGCAAATTTGCCAAGCGCTTTTTTGACAAATACA
AGCGCATGCCGTCGAGCCTGCAGGCTGCCGACTACTCGGCCGCATCCAACTACCTGAAAGCCGTGCAAACCGCCGGCACC
ACGGATGCTGACAAGGTGATGAGCACGCTGAAAACCATGAAGTTTGACGACTTCTACAGCAAGGGCCAGATTCGCGCCGA
CGGCCGCATGATTCACGACATGTACCTCTACCAGGTCAAAGGCACCAAAGAATCGAGCACACCGTGGGACTACTACAAGA
TGGTGGCCAAGGTTCCCGGTGACCAGGCGTTCACGACGGTTGCCGAGTCCAAATGCGCGCTGGTCAAGAAGTAA

Upstream 100 bases:

>100_bases
GCGGTTCACCGCCTGCCTCCCGTTTTCCCCATGCCCCGATTTTTGTCATCCATTTTTGCTTAGCCGGTTCCGATCTCACC
ACCTCAAGAAGGAGAATTTC

Downstream 100 bases:

>100_bases
GCTGACTACTGGCCGGTCGCGCGTGCGATCGGCCGCTTTTCTGTATTCTCAAGGCAAGAACCTAGAAACGGCAGTTGACC
GCTCATTGACCGCTGGCAAG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKLKTLIAAMAIGLGAAASAQNTGPVKIGFITDMSSLYADIDGPAGGEMIRWAAQDFGGKVLGRPIEVLTADHQNKADVA
SSKAREWIDKDGLSALIGGTNSGTALAMSKVATEKKRPFIVIGAGSARLTNEDCTPYTIHYAYDTVALAKVAGSALVKAG
AKNWFFLTADYAFGHSLESDSATVVKANGGTVVGTVRHPLNASDFSAFLLQAQTSKAQILGLANAGGDFTNAMKAAKEFG
ITKSMKIAGLLVFINDVHSLGLANTEGLQLADSWYWNQDDASRKFAKRFFDKYKRMPSSLQAADYSAASNYLKAVQTAGT
TDADKVMSTLKTMKFDDFYSKGQIRADGRMIHDMYLYQVKGTKESSTPWDYYKMVAKVPGDQAFTTVAESKCALVKK

Sequences:

>Translated_397_residues
MKLKTLIAAMAIGLGAAASAQNTGPVKIGFITDMSSLYADIDGPAGGEMIRWAAQDFGGKVLGRPIEVLTADHQNKADVA
SSKAREWIDKDGLSALIGGTNSGTALAMSKVATEKKRPFIVIGAGSARLTNEDCTPYTIHYAYDTVALAKVAGSALVKAG
AKNWFFLTADYAFGHSLESDSATVVKANGGTVVGTVRHPLNASDFSAFLLQAQTSKAQILGLANAGGDFTNAMKAAKEFG
ITKSMKIAGLLVFINDVHSLGLANTEGLQLADSWYWNQDDASRKFAKRFFDKYKRMPSSLQAADYSAASNYLKAVQTAGT
TDADKVMSTLKTMKFDDFYSKGQIRADGRMIHDMYLYQVKGTKESSTPWDYYKMVAKVPGDQAFTTVAESKCALVKK
>Mature_397_residues
MKLKTLIAAMAIGLGAAASAQNTGPVKIGFITDMSSLYADIDGPAGGEMIRWAAQDFGGKVLGRPIEVLTADHQNKADVA
SSKAREWIDKDGLSALIGGTNSGTALAMSKVATEKKRPFIVIGAGSARLTNEDCTPYTIHYAYDTVALAKVAGSALVKAG
AKNWFFLTADYAFGHSLESDSATVVKANGGTVVGTVRHPLNASDFSAFLLQAQTSKAQILGLANAGGDFTNAMKAAKEFG
ITKSMKIAGLLVFINDVHSLGLANTEGLQLADSWYWNQDDASRKFAKRFFDKYKRMPSSLQAADYSAASNYLKAVQTAGT
TDADKVMSTLKTMKFDDFYSKGQIRADGRMIHDMYLYQVKGTKESSTPWDYYKMVAKVPGDQAFTTVAESKCALVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42528; Mature: 42528

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTLIAAMAIGLGAAASAQNTGPVKIGFITDMSSLYADIDGPAGGEMIRWAAQDFGGK
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHEECCCCCCCHHHHHHHHHCCCC
VLGRPIEVLTADHQNKADVASSKAREWIDKDGLSALIGGTNSGTALAMSKVATEKKRPFI
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEE
VIGAGSARLTNEDCTPYTIHYAYDTVALAKVAGSALVKAGAKNWFFLTADYAFGHSLESD
EEECCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCC
SATVVKANGGTVVGTVRHPLNASDFSAFLLQAQTSKAQILGLANAGGDFTNAMKAAKEFG
CEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHC
ITKSMKIAGLLVFINDVHSLGLANTEGLQLADSWYWNQDDASRKFAKRFFDKYKRMPSSL
CCCCHHHHEEEEEEECHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHH
QAADYSAASNYLKAVQTAGTTDADKVMSTLKTMKFDDFYSKGQIRADGRMIHDMYLYQVK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHCCCEEEECCEEEEEEEEEEEE
GTKESSTPWDYYKMVAKVPGDQAFTTVAESKCALVKK
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MKLKTLIAAMAIGLGAAASAQNTGPVKIGFITDMSSLYADIDGPAGGEMIRWAAQDFGGK
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHEECCCCCCCHHHHHHHHHCCCC
VLGRPIEVLTADHQNKADVASSKAREWIDKDGLSALIGGTNSGTALAMSKVATEKKRPFI
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEE
VIGAGSARLTNEDCTPYTIHYAYDTVALAKVAGSALVKAGAKNWFFLTADYAFGHSLESD
EEECCCCEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCC
SATVVKANGGTVVGTVRHPLNASDFSAFLLQAQTSKAQILGLANAGGDFTNAMKAAKEFG
CEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHC
ITKSMKIAGLLVFINDVHSLGLANTEGLQLADSWYWNQDDASRKFAKRFFDKYKRMPSSL
CCCCHHHHEEEEEEECHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHH
QAADYSAASNYLKAVQTAGTTDADKVMSTLKTMKFDDFYSKGQIRADGRMIHDMYLYQVK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHCCCEEEECCEEEEEEEEEEEE
GTKESSTPWDYYKMVAKVPGDQAFTTVAESKCALVKK
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA