Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789798

Identifier: 91789798

GI number: 91789798

Start: 4150515

End: 4151297

Strand: Reverse

Name: 91789798

Synonym: Bpro_3958

Alternate gene names: NA

Gene position: 4151297-4150515 (Counterclockwise)

Preceding gene: 91789799

Following gene: 91789797

Centisome position: 79.83

GC content: 63.98

Gene sequence:

>783_bases
ATGACCGTCAATGAACTCCCTGTCAAAACCGTTCCCGTCCCGGCTGCGCCTATCCCTGCGATCGGCGCAGCCGTGCCCAA
AAGCCAGCAAAAAGGCCAGCAGACCAAGGCGGCCATTGTGGATGCGGCCCTGGGCCTGGCCACACAAATTGGCCTGGAGG
GCCTGAGCATCGGGGCGCTCGCCGAAGTCATGCACATGAGCAAGTCCGGTGTCTTTGCCCATTTTGGCTCACGCGAGGAA
CTGCAGATTTCGGTGGTCCGCGAATACCACAGCCGCTTCGAGGAAGAGGTGTTCTTCCCGGCGTTGCGCGAGGCCAGGGG
CCTGCCGCGCCTGCGCGCGCTGTTTCACAACTGGATGAACCGCACTTCGGTCGAAATCGATTCGGGGTGCCTGTACATCA
GCGGCGCCGTCGAGTTCGACGACCGGCCGGGACCGGTGCGCGATGCGCTGGCGGGCTCGGTGCGGACCTGGCTGGCCGCG
ATGTACCGCGCCGTGGTGCAGGCCAAGGAGGCCGGGCACCTGCAGCGCGATGCCGACGAACAGCAGATGGTTTTCGAGAT
CCACGGACTCATTCTGGCGCTGCATTACGAAGCGCGTTTCCTGAAATCCCCCGGCTCCGTCGCCCGCGCCAACGCCGGCT
TTGCCAACATCCTGGCGCGTTACGGCAACGATGCTGCGCCGTCGCCGGCAGAGCCATCCCCTGGTGCCTCGCCGACGAAA
GCGCCGGAAAAAACGCCGGCAAAAGCCTCCCCCAAAACATCTTCATCTTCCAAACCGGCTTAA

Upstream 100 bases:

>100_bases
CTTGTTCTCTATAAACAGACACTCCATCACCCGCAGGCCTTGACCGTCTTTGAATTGTTGCAAAATAGAACGATCGTTCG
TTTTATTTTGGCTCAATCCC

Downstream 100 bases:

>100_bases
AGCCAAAGGATTCCCCATGCCTCAGTACACCCCACCCCTGCGCGATATGCAATTCGTCATGCACGAAGTGCTCAAGGTCA
CCGATGAATTGAAGGTCTTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTVNELPVKTVPVPAAPIPAIGAAVPKSQQKGQQTKAAIVDAALGLATQIGLEGLSIGALAEVMHMSKSGVFAHFGSREE
LQISVVREYHSRFEEEVFFPALREARGLPRLRALFHNWMNRTSVEIDSGCLYISGAVEFDDRPGPVRDALAGSVRTWLAA
MYRAVVQAKEAGHLQRDADEQQMVFEIHGLILALHYEARFLKSPGSVARANAGFANILARYGNDAAPSPAEPSPGASPTK
APEKTPAKASPKTSSSSKPA

Sequences:

>Translated_260_residues
MTVNELPVKTVPVPAAPIPAIGAAVPKSQQKGQQTKAAIVDAALGLATQIGLEGLSIGALAEVMHMSKSGVFAHFGSREE
LQISVVREYHSRFEEEVFFPALREARGLPRLRALFHNWMNRTSVEIDSGCLYISGAVEFDDRPGPVRDALAGSVRTWLAA
MYRAVVQAKEAGHLQRDADEQQMVFEIHGLILALHYEARFLKSPGSVARANAGFANILARYGNDAAPSPAEPSPGASPTK
APEKTPAKASPKTSSSSKPA
>Mature_259_residues
TVNELPVKTVPVPAAPIPAIGAAVPKSQQKGQQTKAAIVDAALGLATQIGLEGLSIGALAEVMHMSKSGVFAHFGSREEL
QISVVREYHSRFEEEVFFPALREARGLPRLRALFHNWMNRTSVEIDSGCLYISGAVEFDDRPGPVRDALAGSVRTWLAAM
YRAVVQAKEAGHLQRDADEQQMVFEIHGLILALHYEARFLKSPGSVARANAGFANILARYGNDAAPSPAEPSPGASPTKA
PEKTPAKASPKTSSSSKPA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27776; Mature: 27645

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNELPVKTVPVPAAPIPAIGAAVPKSQQKGQQTKAAIVDAALGLATQIGLEGLSIGAL
CCCCCCCCEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AEVMHMSKSGVFAHFGSREELQISVVREYHSRFEEEVFFPALREARGLPRLRALFHNWMN
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
RTSVEIDSGCLYISGAVEFDDRPGPVRDALAGSVRTWLAAMYRAVVQAKEAGHLQRDADE
CCCEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QQMVFEIHGLILALHYEARFLKSPGSVARANAGFANILARYGNDAAPSPAEPSPGASPTK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
APEKTPAKASPKTSSSSKPA
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVNELPVKTVPVPAAPIPAIGAAVPKSQQKGQQTKAAIVDAALGLATQIGLEGLSIGAL
CCCCCCCEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AEVMHMSKSGVFAHFGSREELQISVVREYHSRFEEEVFFPALREARGLPRLRALFHNWMN
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
RTSVEIDSGCLYISGAVEFDDRPGPVRDALAGSVRTWLAAMYRAVVQAKEAGHLQRDADE
CCCEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QQMVFEIHGLILALHYEARFLKSPGSVARANAGFANILARYGNDAAPSPAEPSPGASPTK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
APEKTPAKASPKTSSSSKPA
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA